BLASTX nr result
ID: Coptis24_contig00000298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000298
(1960 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum... 760 0.0
ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogen... 760 0.0
ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogen... 757 0.0
ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidops... 756 0.0
ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogen... 752 0.0
>ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum]
gi|171854593|dbj|BAG16487.1| succinic semialdehyde
dehydrogenase [Solanum lycopersicum]
Length = 522
Score = 760 bits (1963), Expect = 0.0
Identities = 379/515 (73%), Positives = 436/515 (84%), Gaps = 1/515 (0%)
Frame = +2
Query: 158 TRIALRSSKLLI-SRASSTRRQMSMDTKSVVDQLTSKGLIQTQGLIGGRWTSAYDNKTIQ 334
TR+AL + +L S S R M+ DT+SV +L+S GL+++Q LIGG+W AYD KTI+
Sbjct: 8 TRMALSACAMLYRSSISGPVRLMTTDTQSVAAKLSSSGLLRSQALIGGKWVDAYDGKTIK 67
Query: 335 VCDPATGDVIANVACMGRRETSDAISSAYETFKTWSKLTASERSKCLRKWYDLLMAHKED 514
V +PATG+VI +V CMG RET+DAISSAY+ F +WSKLTA+ERS+ LRKWYDL+MAHKE+
Sbjct: 68 VHNPATGEVITDVPCMGGRETNDAISSAYDAFSSWSKLTAAERSRYLRKWYDLIMAHKEE 127
Query: 515 LGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVGV 694
LG+L+TLEQGKPLKEAIGE+SYGA FIEF AEE KRIYGDIIP LADRRLFVLKQPVGV
Sbjct: 128 LGQLMTLEQGKPLKEAIGEVSYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGV 187
Query: 695 VGTITPWNFPLAMITRKVGPALACGCTVVIKXXXXXXXXXXXXXXXXXQAGIPPGVVNVV 874
VG ITPWNFPLAMITRKVGPALACGCTVVIK QAGIPPGVVNVV
Sbjct: 188 VGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVV 247
Query: 875 MGNASEIGDTILESPQVRKITFTGSTAVGKKLMASAAGTVKKVSLELGGNAPCXXXXXXX 1054
MGNA +IGD +L SPQVRKITFTGST VGKKLM AA TVKKVSLELGGNAPC
Sbjct: 248 MGNAPDIGDALLASPQVRKITFTGSTKVGKKLMEGAAATVKKVSLELGGNAPCIIFDDAD 307
Query: 1055 XXXXXKGSIAAKFRNSGQTCVCANRILVQEGIYEKFANAFAAAVQNLQVGNGFTEGVAQG 1234
KG++A KFRN+GQTCVCANRILVQEGIY+KFANAFA AVQN++VG+GFTEGV QG
Sbjct: 308 LEVALKGALATKFRNTGQTCVCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQG 367
Query: 1235 PLINEAAIKKVETFIQDAVTKGAKVTLGGKRHSLGMTFYEPTVVSDVKSEMLLSREEVFG 1414
PLINEAA++KVE F+ +A +KGAKV +GGKRHSLGMTFYEPTVV+ V SEMLL++EEVFG
Sbjct: 368 PLINEAAVQKVEYFVDEATSKGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFG 427
Query: 1415 PVAPILRFKTEEEAIQMANDTNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEV 1594
PVAP+L+FKT+EEAIQMANDTNAGLAAY+F+TN++R+WRV EALE G+VGVNEG++STEV
Sbjct: 428 PVAPLLKFKTDEEAIQMANDTNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEV 487
Query: 1595 APFGGVKQSGLGREGSKYGMDDYLEVKYVCLGNMS 1699
APFGGVKQSGLGREGSKYGMD+YLE+KYVCLG+MS
Sbjct: 488 APFGGVKQSGLGREGSKYGMDEYLEMKYVCLGSMS 522
>ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
[Glycine max]
Length = 537
Score = 760 bits (1962), Expect = 0.0
Identities = 383/532 (71%), Positives = 435/532 (81%), Gaps = 15/532 (2%)
Frame = +2
Query: 155 MTRIALRSSKLLIS---------------RASSTRRQMSMDTKSVVDQLTSKGLIQTQGL 289
+ R+ALRSSKLL + R+MSMD +SV QL S GL++TQGL
Sbjct: 6 LCRMALRSSKLLSRPYHRLSVQLQMQMQPSSPPLTRKMSMDAQSVASQLNSSGLLRTQGL 65
Query: 290 IGGRWTSAYDNKTIQVCDPATGDVIANVACMGRRETSDAISSAYETFKTWSKLTASERSK 469
IGG+W+ AYD KTI+V +PATG+ I +VACMG RET+DAIS+AY+ + +WSK TA+ERSK
Sbjct: 66 IGGKWSDAYDGKTIKVYNPATGESIVDVACMGGRETNDAISAAYDAYGSWSKTTAAERSK 125
Query: 470 CLRKWYDLLMAHKEDLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPT 649
LRKWYDLLM HKE+L +LITLEQGKPLKE++GEI+YGA FIEF AEEAKRIYGDIIP
Sbjct: 126 FLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEINYGAGFIEFAAEEAKRIYGDIIPAP 185
Query: 650 LADRRLFVLKQPVGVVGTITPWNFPLAMITRKVGPALACGCTVVIKXXXXXXXXXXXXXX 829
L+DRRLFVLKQPVGVVG ITPWNFPLAMITRKVGPALACGCTVVIK
Sbjct: 186 LSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAE 245
Query: 830 XXXQAGIPPGVVNVVMGNASEIGDTILESPQVRKITFTGSTAVGKKLMASAAGTVKKVSL 1009
QAGIPPGVVNVVMGNA +IGD +L SPQVRKITFTGSTAVGKKLMA +A TVKKVSL
Sbjct: 246 LSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSL 305
Query: 1010 ELGGNAPCXXXXXXXXXXXXKGSIAAKFRNSGQTCVCANRILVQEGIYEKFANAFAAAVQ 1189
ELGGNAPC KG++AAKFRNSGQTCVCANRI+VQEGIYEKFANA VQ
Sbjct: 306 ELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALRDTVQ 365
Query: 1190 NLQVGNGFTEGVAQGPLINEAAIKKVETFIQDAVTKGAKVTLGGKRHSLGMTFYEPTVVS 1369
N++VG+GF+EGVAQGPLINEAA+KKVE+ I DA +KGAKV LGGKRHSLG TFYEPTV+S
Sbjct: 366 NMKVGDGFSEGVAQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGFTFYEPTVIS 425
Query: 1370 DVKSEMLLSREEVFGPVAPILRFKTEEEAIQMANDTNAGLAAYVFTTNVQRSWRVAEALE 1549
DV S+M +SREE FGPVAP+LRFKTEE+AI++ANDTNAGL +Y+FT ++QRSWRVAEALE
Sbjct: 426 DVNSDMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYIFTNSIQRSWRVAEALE 485
Query: 1550 CGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDDYLEVKYVCLGNMSSA 1705
GLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGMD+YLE+KYVCLGNM A
Sbjct: 486 YGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMHKA 537
>ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
[Cucumis sativus]
Length = 541
Score = 757 bits (1954), Expect = 0.0
Identities = 378/494 (76%), Positives = 423/494 (85%)
Frame = +2
Query: 215 RQMSMDTKSVVDQLTSKGLIQTQGLIGGRWTSAYDNKTIQVCDPATGDVIANVACMGRRE 394
RQMS + +S+ +L S GL+++QGLIGG+W AYD KT++V +PA G+VI NV MG+RE
Sbjct: 45 RQMSSEAQSITTRLHSSGLLRSQGLIGGKWIDAYDGKTLKVQNPANGEVITNVPLMGKRE 104
Query: 395 TSDAISSAYETFKTWSKLTASERSKCLRKWYDLLMAHKEDLGRLITLEQGKPLKEAIGEI 574
T DAISSAY+ FK+WSKLTA++RS LRKWY+LLMAHKE+LG+LITLEQGKPLKEA+GE
Sbjct: 105 TDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLMAHKEELGQLITLEQGKPLKEALGET 164
Query: 575 SYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVGVVGTITPWNFPLAMITRKVGP 754
+YGASFIEF++EEAKR+YGDII PT+ADRRL VLKQPVGVVG ITPWNFPLAMITRKVGP
Sbjct: 165 NYGASFIEFFSEEAKRVYGDIISPTIADRRLLVLKQPVGVVGIITPWNFPLAMITRKVGP 224
Query: 755 ALACGCTVVIKXXXXXXXXXXXXXXXXXQAGIPPGVVNVVMGNASEIGDTILESPQVRKI 934
ALA GCTVVIK QAGIPPGVVNVVMG+A IGD IL S QVRKI
Sbjct: 225 ALASGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKI 284
Query: 935 TFTGSTAVGKKLMASAAGTVKKVSLELGGNAPCXXXXXXXXXXXXKGSIAAKFRNSGQTC 1114
TFTGSTAVGKKLMA AAGTVK+VS ELGGNAPC KGSIAAKFRNSGQTC
Sbjct: 285 TFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIIFDDADVDVAVKGSIAAKFRNSGQTC 344
Query: 1115 VCANRILVQEGIYEKFANAFAAAVQNLQVGNGFTEGVAQGPLINEAAIKKVETFIQDAVT 1294
VCANRILVQEGIYEKF NAF+ AVQNLQVG+GF EGVAQGPLINEAA++KVE F+QDA T
Sbjct: 345 VCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATT 404
Query: 1295 KGAKVTLGGKRHSLGMTFYEPTVVSDVKSEMLLSREEVFGPVAPILRFKTEEEAIQMAND 1474
KGAKV LGGKRHSLGMTF+EPTVV+ VKS+MLLSREEVFGPVAP+L F+TEEEAI +AND
Sbjct: 405 KGAKVLLGGKRHSLGMTFFEPTVVAGVKSDMLLSREEVFGPVAPLLPFRTEEEAIALAND 464
Query: 1475 TNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGM 1654
TNAGLAAY+FT N+QRSWRV EALE G+VGVNEG+ISTEVAPFGGVKQSGLGREGSKYGM
Sbjct: 465 TNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 524
Query: 1655 DDYLEVKYVCLGNM 1696
D+YLE+KYVCLGNM
Sbjct: 525 DEYLELKYVCLGNM 538
>ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana]
gi|118575126|sp|Q9SAK4.2|SSDH_ARATH RecName:
Full=Succinate-semialdehyde dehydrogenase, mitochondrial;
Short=At-SSADH1; AltName: Full=Aldehyde dehydrogenase
family 5 member F1; AltName: Full=NAD(+)-dependent
succinic semialdehyde dehydrogenase; Flags: Precursor
gi|6684442|gb|AAF23590.1|AF117335_1 succinic semialdehyde
dehydrogenase [Arabidopsis thaliana]
gi|16226915|gb|AAL16297.1|AF428367_1 At1g79440/T8K14_14
[Arabidopsis thaliana] gi|15810165|gb|AAL07226.1|
putative succinic semialdehyde dehydrogenase gabD
[Arabidopsis thaliana] gi|332198122|gb|AEE36243.1|
succinate-semialdehyde dehydrogenase [Arabidopsis
thaliana]
Length = 528
Score = 756 bits (1951), Expect = 0.0
Identities = 371/519 (71%), Positives = 439/519 (84%), Gaps = 6/519 (1%)
Frame = +2
Query: 161 RIALRSSKLLISR------ASSTRRQMSMDTKSVVDQLTSKGLIQTQGLIGGRWTSAYDN 322
R+A+ + LIS SS RQMSMD +SV ++L S GL++TQGLIGG+W +YDN
Sbjct: 8 RVAIGGCRKLISSHTSLLLVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIGGKWLDSYDN 67
Query: 323 KTIQVCDPATGDVIANVACMGRRETSDAISSAYETFKTWSKLTASERSKCLRKWYDLLMA 502
KTI+V +PATG++IA+VACMG +ET+DAI+S+YE F +WS+LTA ERSK LR+WYDLL+A
Sbjct: 68 KTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRRWYDLLIA 127
Query: 503 HKEDLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQ 682
HKE+LG+LITLEQGKPLKEAIGE++YGASFIE+YAEEAKR+YGDIIPP L+DRRL VLKQ
Sbjct: 128 HKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQ 187
Query: 683 PVGVVGTITPWNFPLAMITRKVGPALACGCTVVIKXXXXXXXXXXXXXXXXXQAGIPPGV 862
PVGVVG ITPWNFPLAMITRKVGPALA GCTVV+K QAG+PPG
Sbjct: 188 PVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGA 247
Query: 863 VNVVMGNASEIGDTILESPQVRKITFTGSTAVGKKLMASAAGTVKKVSLELGGNAPCXXX 1042
+NVVMGNA EIGD +L SPQVRKITFTGSTAVGKKLMA+AA TVKKVSLELGGNAP
Sbjct: 248 LNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVF 307
Query: 1043 XXXXXXXXXKGSIAAKFRNSGQTCVCANRILVQEGIYEKFANAFAAAVQNLQVGNGFTEG 1222
KG++AAKFRNSGQTCVCANR+LVQ+GIY+KFA AF+ AVQ L+VG+GF +G
Sbjct: 308 DDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDG 367
Query: 1223 VAQGPLINEAAIKKVETFIQDAVTKGAKVTLGGKRHSLGMTFYEPTVVSDVKSEMLLSRE 1402
QGPLIN+AA++KVETF+QDAV+KGAK+ +GGKRHSLGMTFYEPTV+ DV M++S+E
Sbjct: 368 TTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKE 427
Query: 1403 EVFGPVAPILRFKTEEEAIQMANDTNAGLAAYVFTTNVQRSWRVAEALECGLVGVNEGII 1582
E+FGPVAP++RFKTEE+AI++ANDT AGLAAY+FT +VQRSWRV EALE GLVGVNEG+I
Sbjct: 428 EIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLI 487
Query: 1583 STEVAPFGGVKQSGLGREGSKYGMDDYLEVKYVCLGNMS 1699
STEVAPFGGVKQSGLGREGSKYGMD+YLE+KYVCLG+M+
Sbjct: 488 STEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMN 526
>ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
[Glycine max]
Length = 537
Score = 752 bits (1942), Expect = 0.0
Identities = 377/530 (71%), Positives = 432/530 (81%), Gaps = 15/530 (2%)
Frame = +2
Query: 155 MTRIALRSSKLLIS---------------RASSTRRQMSMDTKSVVDQLTSKGLIQTQGL 289
+ R+ALRSSKLL + R+MS D +S+ QL S GL++TQGL
Sbjct: 6 LCRMALRSSKLLYRPYNLLSVQLQMQMQPSSPPLTRKMSTDAQSIASQLNSSGLLRTQGL 65
Query: 290 IGGRWTSAYDNKTIQVCDPATGDVIANVACMGRRETSDAISSAYETFKTWSKLTASERSK 469
I G+W+ AYD KTI+V +PATG+ + +VACMG RET+DAIS+AY+ + +WSK TA+ERSK
Sbjct: 66 IAGKWSDAYDGKTIKVYNPATGESVVDVACMGGRETNDAISAAYDAYGSWSKTTAAERSK 125
Query: 470 CLRKWYDLLMAHKEDLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPT 649
LRKWYDLLM HKE+L +LITLEQGKPLKE++GEI YGA FIEF AEEAKRIYGDI+P
Sbjct: 126 LLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEIVYGAGFIEFAAEEAKRIYGDIVPAP 185
Query: 650 LADRRLFVLKQPVGVVGTITPWNFPLAMITRKVGPALACGCTVVIKXXXXXXXXXXXXXX 829
+DRRLFVLKQPVGVVG ITPWNFPLAMITRKVGPALACGCTVVIK
Sbjct: 186 FSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAVE 245
Query: 830 XXXQAGIPPGVVNVVMGNASEIGDTILESPQVRKITFTGSTAVGKKLMASAAGTVKKVSL 1009
QAGIPPGVVNVVMGNA +IGD +L SPQVRKITFTGSTAVGKKLMA +A TVKKVSL
Sbjct: 246 LSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSL 305
Query: 1010 ELGGNAPCXXXXXXXXXXXXKGSIAAKFRNSGQTCVCANRILVQEGIYEKFANAFAAAVQ 1189
ELGGNAPC KG++AAKFRNSGQTCVCANRI+VQEGIYEKFANA AVQ
Sbjct: 306 ELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALRDAVQ 365
Query: 1190 NLQVGNGFTEGVAQGPLINEAAIKKVETFIQDAVTKGAKVTLGGKRHSLGMTFYEPTVVS 1369
N++VG+GF+EGV+QGPLINEAA+KKVE+ I DA +KGAKV LGGKRHSLG+TFYEPTV+S
Sbjct: 366 NMKVGDGFSEGVSQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGLTFYEPTVIS 425
Query: 1370 DVKSEMLLSREEVFGPVAPILRFKTEEEAIQMANDTNAGLAAYVFTTNVQRSWRVAEALE 1549
DV S+M +SREE FGPVAP+LRFKTEEEAI++ANDTNAGL +YVFT ++QRSWRVAEALE
Sbjct: 426 DVNSDMHISREEAFGPVAPLLRFKTEEEAIRIANDTNAGLGSYVFTNSIQRSWRVAEALE 485
Query: 1550 CGLVGVNEGIISTEVAPFGGVKQSGLGREGSKYGMDDYLEVKYVCLGNMS 1699
GLVGVNEG+ISTEVAPFGG KQSGLGREGSKYGMD+YLE+KYVC GNM+
Sbjct: 486 YGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCFGNMN 535