BLASTX nr result

ID: Coptis24_contig00000290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000290
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284739.2| PREDICTED: uncharacterized protein LOC100243...   448   e-123
ref|XP_002511074.1| conserved hypothetical protein [Ricinus comm...   438   e-120
ref|XP_002321764.1| predicted protein [Populus trichocarpa] gi|2...   438   e-120
ref|XP_003524108.1| PREDICTED: uncharacterized protein LOC100785...   435   e-119
ref|XP_002511073.1| conserved hypothetical protein [Ricinus comm...   430   e-118

>ref|XP_002284739.2| PREDICTED: uncharacterized protein LOC100243857 [Vitis vinifera]
          Length = 465

 Score =  448 bits (1153), Expect = e-123
 Identities = 213/350 (60%), Positives = 266/350 (76%), Gaps = 9/350 (2%)
 Frame = +3

Query: 30   IRLRNSGVCQN--LGQYYGLGSETRRTETYVPDPFGIQVGNPADIPEGYEERWYVNVHAI 203
            I +RNSG+CQ+  L QY+GLGSETR+T T+VPDP+GI++GNP +IP+GYEE+W +NVHAI
Sbjct: 119  ITVRNSGICQDNVLAQYFGLGSETRKTATHVPDPYGIEIGNPVEIPDGYEEKWLLNVHAI 178

Query: 204  DTRGAVDSLGCTECRCDLYNITRDAYDRPLRPDYIGGLLCCYDQTQCRIKEGFNSIKRNM 383
            DTRG  D LGC ECRCDLYN+T D +  PL  DY GGL CCYD+TQCR+KEGF  I+R++
Sbjct: 179  DTRGVEDRLGCAECRCDLYNVTEDGHGYPLSSDYKGGLRCCYDKTQCRVKEGFEGIRRSL 238

Query: 384  YLRYTVKWTDWVDSIVPVKIYILDVTDTGDRTGRMNDSVRLTAEHGCKVEYQVEAC---G 554
            Y++YTVKW DW  S+VPVKIYI DVTD    +   N S    A H C+VEY V +C   G
Sbjct: 239  YMKYTVKWVDWDSSVVPVKIYIFDVTDNWKSS---NASTVHRARHNCRVEYDVGSCSITG 295

Query: 555  VSSNGCLDNKKTGIVMQKAGYVVYGVAHLHSGGLGSALYGEDGRMICSSIAAYGEGKEAG 734
             + +GC+D K+T + M   G+V+YGV+H HSGG+GS LYGEDGR+ICSSI  YGEGKEAG
Sbjct: 296  ETEDGCVDVKRTSLTMPTGGHVIYGVSHQHSGGIGSTLYGEDGRIICSSIPTYGEGKEAG 355

Query: 735  NEAGYIVGMSTCYPQPGSVKISDGEALVLESNYSSSQRHTGVMGLFYLMIAEQLPN-NML 911
            NEAGYIVGMSTCYPQPGSVKISDGE L+LESNYSS+Q+HTGVMGLFY+++AE  PN ++L
Sbjct: 356  NEAGYIVGMSTCYPQPGSVKISDGETLILESNYSSTQKHTGVMGLFYILVAEPSPNPSLL 415

Query: 912  LSVPV---KDNKFTKYSFPLVLGGVAITFVVAIGYRRRNEQEEGYQSLVL 1052
            L  P     ++K       + L G+AI   + + YRRR E E GY++LV+
Sbjct: 416  LHSPFDMHANSKVYNSVSAVALLGLAIAAAIVVVYRRRKETEYGYEALVV 465


>ref|XP_002511074.1| conserved hypothetical protein [Ricinus communis]
            gi|223550189|gb|EEF51676.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 467

 Score =  438 bits (1126), Expect = e-120
 Identities = 206/353 (58%), Positives = 272/353 (77%), Gaps = 17/353 (4%)
 Frame = +3

Query: 42   NSGVCQN--LGQYYGLGSETRRTETYVPDPFGIQVGNPADIPEGYEERWYVNVHAIDTRG 215
            NSG+CQ   LGQY+GLGSETR+T+T+VPDP+GI++GNPA+IP+GYEERW +N+HAIDTRG
Sbjct: 120  NSGICQAHVLGQYFGLGSETRKTDTHVPDPYGIEIGNPAEIPQGYEERWVLNIHAIDTRG 179

Query: 216  AVDSLGCTECRCDLYNITRDAYDRPLRPDYIGGLLCCYDQTQCRIKEGFNSIKRNMYLRY 395
              D LGCTEC+CDLYN+T D Y  PLRP+Y GGLLCCYD+TQC++K+GF   +R++YLRY
Sbjct: 180  VQDRLGCTECKCDLYNVTVDEYGDPLRPEYKGGLLCCYDRTQCKVKQGFQGARRSLYLRY 239

Query: 396  TVKWTDWVDSIVPVKIYILDVTDTGDRTGRMNDSVRLTAEHGCKVEYQVEAC---GVSSN 566
            TVKW DW  +I+PVKI+I DVTDTG    R+N S  ++ ++GC++EY+V++C   GV+ +
Sbjct: 240  TVKWVDWDSTIIPVKIFIFDVTDTGK---RLNGSSGISPQNGCQIEYEVKSCNAAGVAVD 296

Query: 567  GCLDNKKTGIVMQKAGYVVYGVAHLHSGGLGSALYGEDGRMICSSIAAYGEGKEAGNEAG 746
            GC D K+T + M   GYV+YGVAH H+GG  S LYG+DGR+IC+S+  YGEGKEAGNEAG
Sbjct: 297  GCTDVKRTSLTMPTGGYVIYGVAHQHTGGTSSTLYGQDGRVICTSLPIYGEGKEAGNEAG 356

Query: 747  YIVGMSTCYPQPGSVKISDGEALVLESNYSSSQRHTGVMGLFYLMIAEQLPNNMLLSVPV 926
            YIVGMSTCYP+PGSVKI+DGE L LESNYSS+Q HTGVMGLFY+++A+Q PN +    P+
Sbjct: 357  YIVGMSTCYPKPGSVKIADGENLTLESNYSSTQTHTGVMGLFYILVADQTPNPV---TPL 413

Query: 927  KDN-----KFTK----YSF---PLVLGGVAITFVVAIGYRRRNEQEEGYQSLV 1049
            + N     ++ K    YS+    + L G+A+T  +    + R   E GY+S++
Sbjct: 414  QTNHAHMQEYKKSPIHYSWGVAAVALLGLALTVAITKRSQLRKRIENGYESIL 466


>ref|XP_002321764.1| predicted protein [Populus trichocarpa] gi|222868760|gb|EEF05891.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  438 bits (1126), Expect = e-120
 Identities = 207/354 (58%), Positives = 266/354 (75%), Gaps = 10/354 (2%)
 Frame = +3

Query: 18   ESKIIRLRNSGVCQN--LGQYYGLGSETRRTETYVPDPFGIQVGNPADIPEGYEERWYVN 191
            ES  I  RNSG+CQ   L QY+GLGSETR+T T +PDP+ I++GNPA+IP GYEERW +N
Sbjct: 88   ESDRISARNSGICQKGILNQYFGLGSETRKTATRIPDPYAIEIGNPAEIPVGYEERWLLN 147

Query: 192  VHAIDTRGAVDSLGCTECRCDLYNITRDAYDRPLRPDYIGGLLCCYDQTQCRIKEGFNSI 371
            VHAIDTRGA D LGCTECRCDLYNIT   + RPLRPDY GGLLCCYD TQC++K+GF   
Sbjct: 148  VHAIDTRGAEDRLGCTECRCDLYNITVSEWGRPLRPDYKGGLLCCYDHTQCKVKQGFQGT 207

Query: 372  KRNMYLRYTVKWTDWVDSIVPVKIYILDVTDTGDRTGRMNDSVRLTAEHGCKVEYQVEAC 551
            +R++YLRYTV+W +W   I+PVKI+I DVTDTG    R+N S     E+GC+VEY++++C
Sbjct: 208  RRSLYLRYTVEWVEWDSDIIPVKIFIFDVTDTGK---RLNGSTGFGPENGCQVEYEIKSC 264

Query: 552  G---VSSNGCLDNKKTGIVMQKAGYVVYGVAHLHSGGLGSALYGEDGRMICSSIAAYGEG 722
                 + NGC+D K+T   M   GY++YGVAH H+GG+GS LYG+DGR+IC+S+  YGEG
Sbjct: 265  SSTDTAVNGCVDVKRTNFTMPTTGYLIYGVAHQHTGGIGSTLYGKDGRVICTSLPTYGEG 324

Query: 723  KEAGNEAGYIVGMSTCYPQPGSVKISDGEALVLESNYSSSQRHTGVMGLFYLMIAEQLPN 902
            KEAGNEAGYIVGMSTCYP+PGS++I+ GE LVLESNYS  Q HTGVMGLFY+++A++ PN
Sbjct: 325  KEAGNEAGYIVGMSTCYPEPGSIQITAGEKLVLESNYSRDQNHTGVMGLFYILVADRTPN 384

Query: 903  -NMLLSVPVK---DNKFTKYSFPLV-LGGVAITFVVAIGYRRRNEQEEGYQSLV 1049
               LL  P+    + K + Y+  ++ L G+AI   V +  R +  +EEGYQ ++
Sbjct: 385  PTSLLHAPIHMHVNMKGSTYAVAIIALFGMAIAVAVTVHSRLKKGREEGYQPML 438


>ref|XP_003524108.1| PREDICTED: uncharacterized protein LOC100785991 [Glycine max]
          Length = 429

 Score =  435 bits (1119), Expect = e-119
 Identities = 207/296 (69%), Positives = 239/296 (80%), Gaps = 5/296 (1%)
 Frame = +3

Query: 30  IRLRNSGVCQN--LGQYYGLGSETRRTETYVPDPFGIQVGNPADIPEGYEERWYVNVHAI 203
           I +RNSG+CQ   LGQYYGLGSETR T T VPDPFGI VG+ A+IPEGYEE+W VN+HAI
Sbjct: 117 IFVRNSGICQRDILGQYYGLGSETRGTATDVPDPFGIVVGDHAEIPEGYEEKWLVNIHAI 176

Query: 204 DTRGAVDSLGCTECRCDLYNITRDAYDRPLRPDYIGGLLCCYDQTQCRIKEGFNSIKRNM 383
           DTRG VD +GCTECRCDLYN+T+D Y   LRPDY GGL CCYDQTQCR++EGF   KR++
Sbjct: 177 DTRGVVDKMGCTECRCDLYNVTKDEYGEFLRPDYKGGLKCCYDQTQCRLREGFEGPKRSL 236

Query: 384 YLRYTVKWTDWVDSIVPVKIYILDVTDTGDRTGRMNDSVRLTAEHGCKVEYQVEACGV-- 557
           YLRYTVKW +W   IVPVKIYILDVTDT       +DS  +  EH C+VEY+VE C    
Sbjct: 237 YLRYTVKWVEWDKFIVPVKIYILDVTDT---LKISDDSGEMIPEHDCRVEYEVEYCSTGQ 293

Query: 558 -SSNGCLDNKKTGIVMQKAGYVVYGVAHLHSGGLGSALYGEDGRMICSSIAAYGEGKEAG 734
            + NGCLD K+T + +QK GYV+YGVAH HSGG GS LYG+DGR+ICSSI +YG+GKEAG
Sbjct: 294 KNGNGCLDGKRTSLPIQKGGYVIYGVAHQHSGGTGSTLYGQDGRVICSSIPSYGKGKEAG 353

Query: 735 NEAGYIVGMSTCYPQPGSVKISDGEALVLESNYSSSQRHTGVMGLFYLMIAEQLPN 902
           NEA YIVGMSTCYP+PGSVKI DGE L LESNYSSS+ HTGVMGLFYL++AEQLP+
Sbjct: 354 NEADYIVGMSTCYPRPGSVKIIDGETLTLESNYSSSREHTGVMGLFYLLVAEQLPD 409


>ref|XP_002511073.1| conserved hypothetical protein [Ricinus communis]
            gi|223550188|gb|EEF51675.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 463

 Score =  430 bits (1106), Expect = e-118
 Identities = 201/359 (55%), Positives = 276/359 (76%), Gaps = 10/359 (2%)
 Frame = +3

Query: 3    DNGDTESKIIRLRNSGVCQN--LGQYYGLGSETRRTETYVPDPFGIQVGNPADIPEGYEE 176
            +NG+++  ++  +NSG+CQ   L Q++GLGSETR T T+V DP+GI++GNP +IP GYEE
Sbjct: 109  NNGNSD--VMLAKNSGICQGGILRQHFGLGSETRGTATHVSDPYGIEIGNPDEIPAGYEE 166

Query: 177  RWYVNVHAIDTRGAVDSLGCTECRCDLYNITRDAYDRPLRPDYIGGLLCCYDQTQCRIKE 356
            RW +NVHAIDTRG  D LGCTEC+CD+YNIT D + RP+RPDY GGL CCYD TQC+++ 
Sbjct: 167  RWLLNVHAIDTRGVEDRLGCTECKCDIYNITVDEFGRPIRPDYKGGLFCCYDHTQCKVRP 226

Query: 357  GFNSIKRNMYLRYTVKWTDWVDSIVPVKIYILDVTDTGDRTGRMNDSVRLTAEHGCKVEY 536
            G+  ++R++YLRYTVKW DW  S++PVKI+ILDVTDTG    R+NDS  L+ E GC++EY
Sbjct: 227  GYEDVRRSLYLRYTVKWVDWDSSVIPVKIFILDVTDTGK---RLNDSTILSPESGCQIEY 283

Query: 537  QVEAC---GVSSNGCLDNKKTGIVMQKAGYVVYGVAHLHSGGLGSALYGEDGRMICSSIA 707
            +VEAC    ++S+ C+D K+T +++   GYV+YGVAH H+GG+GS LYG+DG +IC+S+ 
Sbjct: 284  EVEACSTTALTSDDCIDIKRTSLIIPTGGYVIYGVAHQHTGGVGSTLYGKDGLVICTSVP 343

Query: 708  AYGEGKEAGNEAGYIVGMSTCYPQPGSVKISDGEALVLESNYSSSQRHTGVMGLFYLMIA 887
             YGEG EAGNEAGYIVGMSTCYP+PGS+KI+DGE L+LES YS +Q HTGVMGLFY+++A
Sbjct: 344  IYGEGMEAGNEAGYIVGMSTCYPKPGSIKIADGENLILESRYSRAQEHTGVMGLFYILVA 403

Query: 888  EQLPNNMLL---SVPVKDN-KFTKYSFPL-VLGGVAITFVVAIGYRRRNEQEEGYQSLV 1049
            +++P  M      V V +N + + Y + + VL G+A T  VA+G   +  +++GYQ ++
Sbjct: 404  DRVPERMPFIESLVYVHENMEPSAYRWAIVVLLGLATTLAVAVGSWLKKGKDDGYQPIL 462


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