BLASTX nr result

ID: Coptis24_contig00000288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000288
         (3033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270005.2| PREDICTED: uncharacterized protein LOC100256...   648   0.0  
emb|CBI23970.3| unnamed protein product [Vitis vinifera]              648   0.0  
ref|XP_002329825.1| predicted protein [Populus trichocarpa] gi|2...   624   e-176
emb|CBI20302.3| unnamed protein product [Vitis vinifera]              622   e-175
ref|XP_002282417.1| PREDICTED: uncharacterized protein LOC100246...   622   e-175

>ref|XP_002270005.2| PREDICTED: uncharacterized protein LOC100256311 [Vitis vinifera]
          Length = 618

 Score =  648 bits (1672), Expect = 0.0
 Identities = 312/433 (72%), Positives = 351/433 (81%), Gaps = 12/433 (2%)
 Frame = -3

Query: 1525 PAVDGSAFPHDHPCGKFAVRSPPTDRKRTGPRPCAVCYLPVEQAIVQMPKIPSTSPVLEN 1346
            P   G   P  HPC  FA+  PP D+KRTGPRPC VCYLPVE+AI  MPK PS SP+L N
Sbjct: 159  PVFLGYNLPPGHPCENFALPPPPADKKRTGPRPCPVCYLPVEEAIALMPKYPSPSPLLNN 218

Query: 1345 LTFVQDENPVRKELFGGSDFGGYPSLQQRNASYDIKESMNVHCGFVKGLKPGRQTGFDID 1166
            LTFV +EN  + + FGGSDFGGYPSL QR  SYDI+ESM VHCGFV+G KPG++TGF++D
Sbjct: 219  LTFVYEENLTKGDSFGGSDFGGYPSLDQRANSYDIRESMTVHCGFVRGAKPGQRTGFNMD 278

Query: 1165 DADLSEMEQCRGVVVASAIFGNYDILQQPKNISDAAKTNVCFYMFVDEKTESYIKNSSAL 986
            D+DL EMEQC GVVVASAIFGNYD++QQPKNISDAAK NVCFYMFVDE+TE+++KNSS L
Sbjct: 279  DSDLFEMEQCHGVVVASAIFGNYDVIQQPKNISDAAKENVCFYMFVDEETEAHLKNSSGL 338

Query: 985  NDIKKVGLWRVVVTRNLPYADARRNGKVPKLLLHRIFPNARYSLWIDGKLELVVDPYQVL 806
            +D K+VGLWR+VV  NLPY DARRNGKVPKLLLHR+FPNARYSLWIDGKLELVVDP+Q+L
Sbjct: 339  DDNKRVGLWRIVVVHNLPYNDARRNGKVPKLLLHRMFPNARYSLWIDGKLELVVDPFQIL 398

Query: 805  ERFLWRNGGTFAISRHYRRFDVFEEAEANKAAGKYSNASIDSQVEFYKEEGLTPYSVAKL 626
            ERFLWR   +FAISRHYRRFDVF EAEANKAA KY NASID QVEFYK EGLTPYS AKL
Sbjct: 399  ERFLWRKNASFAISRHYRRFDVFVEAEANKAAAKYDNASIDFQVEFYKSEGLTPYSEAKL 458

Query: 625  PITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMEKVNWRLNMF 446
            PITSDVPEGCVI+REHIPI+NLFTCLWFNEVDRFTSRDQ+SFSTVRDKI  K NW +NMF
Sbjct: 459  PITSDVPEGCVIVREHIPISNLFTCLWFNEVDRFTSRDQISFSTVRDKIRAKTNWTVNMF 518

Query: 445  KDCERRNFVVQAYHRDLLEHIA------PPIATALHPPPILTK------ERPVKSSPVIT 302
             DCERRNFVVQ YHRD+LEH+A      PP+  A+ PPP++ K        P    P I+
Sbjct: 519  LDCERRNFVVQGYHRDVLEHMASSVALPPPLVLAVEPPPLVNKLPVPPPPPPPPPPPEIS 578

Query: 301  TNRVERTPARKTP 263
            T RV   P  + P
Sbjct: 579  TVRVVSNPVTRVP 591


>emb|CBI23970.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  648 bits (1672), Expect = 0.0
 Identities = 312/433 (72%), Positives = 351/433 (81%), Gaps = 12/433 (2%)
 Frame = -3

Query: 1525 PAVDGSAFPHDHPCGKFAVRSPPTDRKRTGPRPCAVCYLPVEQAIVQMPKIPSTSPVLEN 1346
            P   G   P  HPC  FA+  PP D+KRTGPRPC VCYLPVE+AI  MPK PS SP+L N
Sbjct: 65   PVFLGYNLPPGHPCENFALPPPPADKKRTGPRPCPVCYLPVEEAIALMPKYPSPSPLLNN 124

Query: 1345 LTFVQDENPVRKELFGGSDFGGYPSLQQRNASYDIKESMNVHCGFVKGLKPGRQTGFDID 1166
            LTFV +EN  + + FGGSDFGGYPSL QR  SYDI+ESM VHCGFV+G KPG++TGF++D
Sbjct: 125  LTFVYEENLTKGDSFGGSDFGGYPSLDQRANSYDIRESMTVHCGFVRGAKPGQRTGFNMD 184

Query: 1165 DADLSEMEQCRGVVVASAIFGNYDILQQPKNISDAAKTNVCFYMFVDEKTESYIKNSSAL 986
            D+DL EMEQC GVVVASAIFGNYD++QQPKNISDAAK NVCFYMFVDE+TE+++KNSS L
Sbjct: 185  DSDLFEMEQCHGVVVASAIFGNYDVIQQPKNISDAAKENVCFYMFVDEETEAHLKNSSGL 244

Query: 985  NDIKKVGLWRVVVTRNLPYADARRNGKVPKLLLHRIFPNARYSLWIDGKLELVVDPYQVL 806
            +D K+VGLWR+VV  NLPY DARRNGKVPKLLLHR+FPNARYSLWIDGKLELVVDP+Q+L
Sbjct: 245  DDNKRVGLWRIVVVHNLPYNDARRNGKVPKLLLHRMFPNARYSLWIDGKLELVVDPFQIL 304

Query: 805  ERFLWRNGGTFAISRHYRRFDVFEEAEANKAAGKYSNASIDSQVEFYKEEGLTPYSVAKL 626
            ERFLWR   +FAISRHYRRFDVF EAEANKAA KY NASID QVEFYK EGLTPYS AKL
Sbjct: 305  ERFLWRKNASFAISRHYRRFDVFVEAEANKAAAKYDNASIDFQVEFYKSEGLTPYSEAKL 364

Query: 625  PITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMEKVNWRLNMF 446
            PITSDVPEGCVI+REHIPI+NLFTCLWFNEVDRFTSRDQ+SFSTVRDKI  K NW +NMF
Sbjct: 365  PITSDVPEGCVIVREHIPISNLFTCLWFNEVDRFTSRDQISFSTVRDKIRAKTNWTVNMF 424

Query: 445  KDCERRNFVVQAYHRDLLEHIA------PPIATALHPPPILTK------ERPVKSSPVIT 302
             DCERRNFVVQ YHRD+LEH+A      PP+  A+ PPP++ K        P    P I+
Sbjct: 425  LDCERRNFVVQGYHRDVLEHMASSVALPPPLVLAVEPPPLVNKLPVPPPPPPPPPPPEIS 484

Query: 301  TNRVERTPARKTP 263
            T RV   P  + P
Sbjct: 485  TVRVVSNPVTRVP 497


>ref|XP_002329825.1| predicted protein [Populus trichocarpa] gi|222870887|gb|EEF08018.1|
            predicted protein [Populus trichocarpa]
          Length = 591

 Score =  624 bits (1610), Expect = e-176
 Identities = 301/461 (65%), Positives = 359/461 (77%), Gaps = 12/461 (2%)
 Frame = -3

Query: 1546 NKSQLLPPAVD-GSAFPHDHPCGKFAVRSPPTDRKRTGPRPCAVCYLPVEQAIVQMPKIP 1370
            N S L PPA   G   P  HPC +F +  PP D+KRTGPRPC VCYLPVE+AI  MPK+P
Sbjct: 127  NISLLHPPAYFLGYTLPPGHPCNRFTLPPPPADKKRTGPRPCPVCYLPVEEAIALMPKVP 186

Query: 1369 STSPVLENLTFVQDENPVRKELFGGSDFGGYPSLQQRNASYDIKESMNVHCGFVKGLKPG 1190
            S SPV++NLT++Q++   R+  FGGSDFGGYP+L+QR+ SYDI+ESM VHCGFV+G +PG
Sbjct: 187  SFSPVIKNLTYIQEDPLSREGEFGGSDFGGYPTLKQRSDSYDIRESMRVHCGFVQGKRPG 246

Query: 1189 RQTGFDIDDADLSEMEQCRGVVVASAIFGNYDILQQPKNISDAAKTNVCFYMFVDEKTES 1010
            + TGFD+D  DL  MEQC GVVVASAIFG +D +QQP+NIS+ +K  +CF+MFVDE+TE+
Sbjct: 247  QNTGFDMDKIDLDAMEQCHGVVVASAIFGAFDDIQQPRNISEYSKNTICFFMFVDEETEA 306

Query: 1009 YIKNSSALNDIKKVGLWRVVVTRNLPYADARRNGKVPKLLLHRIFPNARYSLWIDGKLEL 830
            Y+KN+S LND +KVG+WR+VV  NLPY D RRNGKVPKLL HR+FPNAR+SLWIDGKLEL
Sbjct: 307  YLKNNSGLNDSRKVGIWRIVVVHNLPYTDGRRNGKVPKLLSHRMFPNARFSLWIDGKLEL 366

Query: 829  VVDPYQVLERFLWRNGGTFAISRHYRRFDVFEEAEANKAAGKYSNASIDSQVEFYKEEGL 650
            VVDPYQ+LERFLWR   TFAISRHYRRFDVF EAEANKAAGKY NASID QVEFYK+EGL
Sbjct: 367  VVDPYQILERFLWRENATFAISRHYRRFDVFIEAEANKAAGKYENASIDFQVEFYKKEGL 426

Query: 649  TPYSVAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMEK 470
            TPYS AK PI SDVPEGCV+IREH+PI+NLFTCLWFNEVDRFTSRDQ+SFSTVRDKI EK
Sbjct: 427  TPYSEAKFPIISDVPEGCVVIREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKIHEK 486

Query: 469  VNWRLNMFKDCERRNFVVQAYHRDLLEHIA--PPI---------ATALHPPPILTKERPV 323
             NW +NMF DC+RRNFVVQ YHRD+LE +A  PP+         A    PPP+L  E P+
Sbjct: 487  TNWTVNMFLDCQRRNFVVQKYHRDVLEQMAHRPPVYPPSPPLQLAPPPPPPPLLVDEPPL 546

Query: 322  KSSPVITTNRVERTPARKTPPXXXXXXXXXXXRKITAGTRD 200
            +++   +T +V   P R+ P            RK+ AG ++
Sbjct: 547  QTTLDTSTEKVIGAPVRRAPARRGRRSGSSRHRKVAAGGKE 587


>emb|CBI20302.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  622 bits (1604), Expect = e-175
 Identities = 304/456 (66%), Positives = 354/456 (77%), Gaps = 9/456 (1%)
 Frame = -3

Query: 1600 QNKDNNSTLHKIVLVSDENKSQL--LPP------AVDGSAFPHDHPCGKFAVRSPPT-DR 1448
            ++KDN   +   V  S EN +    LPP      AV G   P  HPC  FA   PP  DR
Sbjct: 60   KHKDNVDYIPSTVTESGENNAHRPPLPPSTSAVAAVVGYTPPLHHPCENFAFPPPPPPDR 119

Query: 1447 KRTGPRPCAVCYLPVEQAIVQMPKIPSTSPVLENLTFVQDENPVRKELFGGSDFGGYPSL 1268
            KR GPRPC VCYLPVEQAI  +P   S SP+L+ L +V +ENP++ E  GGS+FGGYPSL
Sbjct: 120  KRIGPRPCPVCYLPVEQAIASIPSSSSPSPLLKQLNYVHEENPIKTEPHGGSEFGGYPSL 179

Query: 1267 QQRNASYDIKESMNVHCGFVKGLKPGRQTGFDIDDADLSEMEQCRGVVVASAIFGNYDIL 1088
            +QRN S+DIKESM VHCGFV G KPG  TGFDID+ADL E+EQ   V+VASAIFGNYDI+
Sbjct: 180  KQRNDSFDIKESMTVHCGFVTGSKPGHHTGFDIDEADLKELEQPHEVIVASAIFGNYDII 239

Query: 1087 QQPKNISDAAKTNVCFYMFVDEKTESYIKNSSALNDIKKVGLWRVVVTRNLPYADARRNG 908
            QQP+N+S+AA+ NV FYMF+DE+TE+Y++NSS L+  K+VGLWR+++  N+PY DARRNG
Sbjct: 240  QQPRNVSEAARKNVPFYMFIDEETEAYMRNSSVLDSSKRVGLWRIILVHNIPYTDARRNG 299

Query: 907  KVPKLLLHRIFPNARYSLWIDGKLELVVDPYQVLERFLWRNGGTFAISRHYRRFDVFEEA 728
            K+PKLLLHRIFPN R+S+WIDGKL+L+VDPYQVLERFLWR   + AISRHYRRFDVFEEA
Sbjct: 300  KIPKLLLHRIFPNVRFSIWIDGKLQLLVDPYQVLERFLWRQNASLAISRHYRRFDVFEEA 359

Query: 727  EANKAAGKYSNASIDSQVEFYKEEGLTPYSVAKLPITSDVPEGCVIIREHIPITNLFTCL 548
            EANKAAGKY N SID Q+EFYK EGLTPYS AKLPITSDVPEGCVI++EHIPITNLFTCL
Sbjct: 360  EANKAAGKYDNVSIDYQIEFYKNEGLTPYSEAKLPITSDVPEGCVIVKEHIPITNLFTCL 419

Query: 547  WFNEVDRFTSRDQLSFSTVRDKIMEKVNWRLNMFKDCERRNFVVQAYHRDLLEHIAPPIA 368
            WFNEVDRFTSRDQLSF+ VRDKI  +V+W ++MF DCERRNFV QAYHRDLLEH+APP  
Sbjct: 420  WFNEVDRFTSRDQLSFAIVRDKITSQVDWNISMFLDCERRNFVYQAYHRDLLEHMAPP-P 478

Query: 367  TALHPPPILTKERPVKSSPVITTNRVERTPARKTPP 260
              +HPPP        +   VI  N   RTPARK PP
Sbjct: 479  PVVHPPPRDVVIPGNRQGAVIPENVAGRTPARKNPP 514


>ref|XP_002282417.1| PREDICTED: uncharacterized protein LOC100246918 [Vitis vinifera]
          Length = 604

 Score =  622 bits (1604), Expect = e-175
 Identities = 304/456 (66%), Positives = 354/456 (77%), Gaps = 9/456 (1%)
 Frame = -3

Query: 1600 QNKDNNSTLHKIVLVSDENKSQL--LPP------AVDGSAFPHDHPCGKFAVRSPPT-DR 1448
            ++KDN   +   V  S EN +    LPP      AV G   P  HPC  FA   PP  DR
Sbjct: 123  KHKDNVDYIPSTVTESGENNAHRPPLPPSTSAVAAVVGYTPPLHHPCENFAFPPPPPPDR 182

Query: 1447 KRTGPRPCAVCYLPVEQAIVQMPKIPSTSPVLENLTFVQDENPVRKELFGGSDFGGYPSL 1268
            KR GPRPC VCYLPVEQAI  +P   S SP+L+ L +V +ENP++ E  GGS+FGGYPSL
Sbjct: 183  KRIGPRPCPVCYLPVEQAIASIPSSSSPSPLLKQLNYVHEENPIKTEPHGGSEFGGYPSL 242

Query: 1267 QQRNASYDIKESMNVHCGFVKGLKPGRQTGFDIDDADLSEMEQCRGVVVASAIFGNYDIL 1088
            +QRN S+DIKESM VHCGFV G KPG  TGFDID+ADL E+EQ   V+VASAIFGNYDI+
Sbjct: 243  KQRNDSFDIKESMTVHCGFVTGSKPGHHTGFDIDEADLKELEQPHEVIVASAIFGNYDII 302

Query: 1087 QQPKNISDAAKTNVCFYMFVDEKTESYIKNSSALNDIKKVGLWRVVVTRNLPYADARRNG 908
            QQP+N+S+AA+ NV FYMF+DE+TE+Y++NSS L+  K+VGLWR+++  N+PY DARRNG
Sbjct: 303  QQPRNVSEAARKNVPFYMFIDEETEAYMRNSSVLDSSKRVGLWRIILVHNIPYTDARRNG 362

Query: 907  KVPKLLLHRIFPNARYSLWIDGKLELVVDPYQVLERFLWRNGGTFAISRHYRRFDVFEEA 728
            K+PKLLLHRIFPN R+S+WIDGKL+L+VDPYQVLERFLWR   + AISRHYRRFDVFEEA
Sbjct: 363  KIPKLLLHRIFPNVRFSIWIDGKLQLLVDPYQVLERFLWRQNASLAISRHYRRFDVFEEA 422

Query: 727  EANKAAGKYSNASIDSQVEFYKEEGLTPYSVAKLPITSDVPEGCVIIREHIPITNLFTCL 548
            EANKAAGKY N SID Q+EFYK EGLTPYS AKLPITSDVPEGCVI++EHIPITNLFTCL
Sbjct: 423  EANKAAGKYDNVSIDYQIEFYKNEGLTPYSEAKLPITSDVPEGCVIVKEHIPITNLFTCL 482

Query: 547  WFNEVDRFTSRDQLSFSTVRDKIMEKVNWRLNMFKDCERRNFVVQAYHRDLLEHIAPPIA 368
            WFNEVDRFTSRDQLSF+ VRDKI  +V+W ++MF DCERRNFV QAYHRDLLEH+APP  
Sbjct: 483  WFNEVDRFTSRDQLSFAIVRDKITSQVDWNISMFLDCERRNFVYQAYHRDLLEHMAPP-P 541

Query: 367  TALHPPPILTKERPVKSSPVITTNRVERTPARKTPP 260
              +HPPP        +   VI  N   RTPARK PP
Sbjct: 542  PVVHPPPRDVVIPGNRQGAVIPENVAGRTPARKNPP 577


Top