BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000282
         (2061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma...  1014   0.0  
emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]  1014   0.0  
ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma...  1000   0.0  
ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|2...   997   0.0  
ref|XP_002325286.1| predicted protein [Populus trichocarpa] gi|2...   995   0.0  

>ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
            gi|296084839|emb|CBI27721.3| unnamed protein product
            [Vitis vinifera]
          Length = 557

 Score = 1014 bits (2621), Expect = 0.0
 Identities = 509/557 (91%), Positives = 536/557 (96%)
 Frame = +3

Query: 99   MHAPVLVLNESQKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAAGGIVVTND 278
            M APVLVL +S KRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDA GGIVVTND
Sbjct: 1    MQAPVLVLKDSLKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 279  GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHPTVI 458
            GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVI+LAGEMLHVAEAFI+KSYHPTVI
Sbjct: 61   GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVI 120

Query: 459  CRAYNRALEDALTVLDKIAVSIDVNDREMMLGLVKSCIGTKFTSQFGDLIADLAIEATKT 638
            CRAYN+ALEDA+ VLDKIA+SIDV DR  +LGLVKSCIGTKFTSQFGDLIADLAI+AT T
Sbjct: 121  CRAYNKALEDAIAVLDKIAMSIDVKDRSTVLGLVKSCIGTKFTSQFGDLIADLAIDATMT 180

Query: 639  VGVDLGQGVREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKILNPRIIL 818
            VGVDLGQG+REVDIKKYIKVEKVPGGQLEDS+VLKGVM NKDV+APGKMRRKI+NPRIIL
Sbjct: 181  VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVIAPGKMRRKIVNPRIIL 240

Query: 819  LDCPLEYKKGENQTNAELVKEEDWGVMLKMEEEYIENICAQILKFKPDLVITEKGLSDLA 998
            LDCPLEYKKGENQTNAELVKEEDWGV+LKMEEEYIE+IC QILKFKPDLVITEKGLSDLA
Sbjct: 241  LDCPLEYKKGENQTNAELVKEEDWGVLLKMEEEYIESICMQILKFKPDLVITEKGLSDLA 300

Query: 999  CHFLSKAGVSAIRRLRKTDNNRIAKACGAVVVNRPEELQESDIGTRAGLFEVRKIGDEFF 1178
            CH+LSKAGVSAIRRLRKTDNNRIAKACGAV+VNRP+ELQESD+GT AGLFEV+KIGDEFF
Sbjct: 301  CHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFF 360

Query: 1179 AFIVECKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKHPKLVPGGGASELTVSA 1358
            AFIV+CKDPKACTVLLRG SKDLLNEVERNLQDAM VARNIIK+PKLVPGGGA+ELTVSA
Sbjct: 361  AFIVDCKDPKACTVLLRGPSKDLLNEVERNLQDAMCVARNIIKNPKLVPGGGATELTVSA 420

Query: 1359 TLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENPWIGI 1538
            TLKQKSSSIEGIEKWPYEAAA+AFEAIPRTLAQNCGVNVIRTMTALQGKHANGEN W+GI
Sbjct: 421  TLKQKSSSIEGIEKWPYEAAAVAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWMGI 480

Query: 1539 DGNTGEITDMKGNRIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQPPGAGQGPSK 1718
            DGNTG ITDMK  +IWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ PGAGQ PSK
Sbjct: 481  DGNTGAITDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGAGQAPSK 540

Query: 1719 PKVEEEGDADGEQILPE 1769
            PK+EEEGDAD EQILPE
Sbjct: 541  PKIEEEGDADNEQILPE 557


>emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]
          Length = 557

 Score = 1014 bits (2621), Expect = 0.0
 Identities = 509/557 (91%), Positives = 536/557 (96%)
 Frame = +3

Query: 99   MHAPVLVLNESQKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAAGGIVVTND 278
            M APVLVL +S KRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDA GGIVVTND
Sbjct: 1    MQAPVLVLKDSLKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 279  GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHPTVI 458
            GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVI+LAGEMLHVAEAFI+KSYHPTVI
Sbjct: 61   GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVI 120

Query: 459  CRAYNRALEDALTVLDKIAVSIDVNDREMMLGLVKSCIGTKFTSQFGDLIADLAIEATKT 638
            CRAYN+ALEDA+ VLDKIA+SIDV DR  +LGLVKSCIGTKFTSQFGDLIADLAI+AT T
Sbjct: 121  CRAYNKALEDAIAVLDKIAMSIDVKDRSTVLGLVKSCIGTKFTSQFGDLIADLAIDATTT 180

Query: 639  VGVDLGQGVREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKILNPRIIL 818
            VGVDLGQG+REVDIKKYIKVEKVPGGQLEDS+VLKGVM NKDV+APGKMRRKI+NPRIIL
Sbjct: 181  VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVIAPGKMRRKIVNPRIIL 240

Query: 819  LDCPLEYKKGENQTNAELVKEEDWGVMLKMEEEYIENICAQILKFKPDLVITEKGLSDLA 998
            LDCPLEYKKGENQTNAELVKEEDWGV+LKMEEEYIE+IC QILKFKPDLVITEKGLSDLA
Sbjct: 241  LDCPLEYKKGENQTNAELVKEEDWGVLLKMEEEYIESICMQILKFKPDLVITEKGLSDLA 300

Query: 999  CHFLSKAGVSAIRRLRKTDNNRIAKACGAVVVNRPEELQESDIGTRAGLFEVRKIGDEFF 1178
            CH+LSKAGVSAIRRLRKTDNNRIAKACGAV+VNRP+ELQESD+GT AGLFEV+KIGDEFF
Sbjct: 301  CHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFF 360

Query: 1179 AFIVECKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKHPKLVPGGGASELTVSA 1358
            AFIV+CKDPKACTVLLRG SKDLLNEVERNLQDAM VARNIIK+PKLVPGGGA+ELTVSA
Sbjct: 361  AFIVDCKDPKACTVLLRGPSKDLLNEVERNLQDAMCVARNIIKNPKLVPGGGATELTVSA 420

Query: 1359 TLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENPWIGI 1538
            TLKQKSSSIEGIEKWPYEAAA+AFEAIPRTLAQNCGVNVIRTMTALQGKHANGEN W+GI
Sbjct: 421  TLKQKSSSIEGIEKWPYEAAAVAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWMGI 480

Query: 1539 DGNTGEITDMKGNRIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQPPGAGQGPSK 1718
            DGNTG ITDMK  +IWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ PGAGQ PSK
Sbjct: 481  DGNTGAITDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGAGQAPSK 540

Query: 1719 PKVEEEGDADGEQILPE 1769
            PK+EEEGDAD EQILPE
Sbjct: 541  PKIEEEGDADNEQILPE 557


>ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
            gi|297733798|emb|CBI15045.3| unnamed protein product
            [Vitis vinifera]
          Length = 557

 Score = 1000 bits (2586), Expect = 0.0
 Identities = 498/557 (89%), Positives = 533/557 (95%)
 Frame = +3

Query: 99   MHAPVLVLNESQKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAAGGIVVTND 278
            M APVLVL +S  RESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDA GGIVVTND
Sbjct: 1    MQAPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 279  GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHPTVI 458
            GN+ILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVI+LAGEMLHVAEAFI+K++HPTVI
Sbjct: 61   GNSILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKNFHPTVI 120

Query: 459  CRAYNRALEDALTVLDKIAVSIDVNDREMMLGLVKSCIGTKFTSQFGDLIADLAIEATKT 638
            CRAYN+ALEDA+ VLDKIA  +DVNDR  MLG+VKSCIGTKFT QFGDLIADLA++AT T
Sbjct: 121  CRAYNKALEDAIAVLDKIAAPVDVNDRVAMLGMVKSCIGTKFTGQFGDLIADLALDATTT 180

Query: 639  VGVDLGQGVREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKILNPRIIL 818
            VGVDLGQG+REVDIKKYIKVEKVPGGQLEDS+VLKGVM NKDVVAPGKMRRKI+NPRIIL
Sbjct: 181  VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVAPGKMRRKIINPRIIL 240

Query: 819  LDCPLEYKKGENQTNAELVKEEDWGVMLKMEEEYIENICAQILKFKPDLVITEKGLSDLA 998
            LDCPLEYKKGENQTNAELV+EEDWG++LKMEEEYIEN+C QILKFKPDLVITEKGLSDLA
Sbjct: 241  LDCPLEYKKGENQTNAELVREEDWGILLKMEEEYIENLCMQILKFKPDLVITEKGLSDLA 300

Query: 999  CHFLSKAGVSAIRRLRKTDNNRIAKACGAVVVNRPEELQESDIGTRAGLFEVRKIGDEFF 1178
            CH+LSKAGVSAIRRLRKTDNNRIAKACGAVVVNRP+ELQESD+GTRAG+FEV+KIGDEFF
Sbjct: 301  CHYLSKAGVSAIRRLRKTDNNRIAKACGAVVVNRPDELQESDVGTRAGIFEVKKIGDEFF 360

Query: 1179 AFIVECKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKHPKLVPGGGASELTVSA 1358
            AFI EC DPKACTVLLRGASKDLLNEVERNLQDAMSVARN+IK+PKLVPGGGA+ELTVSA
Sbjct: 361  AFIDECTDPKACTVLLRGASKDLLNEVERNLQDAMSVARNMIKNPKLVPGGGATELTVSA 420

Query: 1359 TLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENPWIGI 1538
            TLKQKSSS+EGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGEN WIGI
Sbjct: 421  TLKQKSSSVEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGI 480

Query: 1539 DGNTGEITDMKGNRIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQPPGAGQGPSK 1718
            DG+TG ITDMK  +IWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ PGAGQ PSK
Sbjct: 481  DGSTGAITDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGAGQAPSK 540

Query: 1719 PKVEEEGDADGEQILPE 1769
            P +E+EGDAD EQ++PE
Sbjct: 541  PTIEQEGDADNEQMIPE 557


>ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|222848309|gb|EEE85856.1|
            predicted protein [Populus trichocarpa]
          Length = 556

 Score =  997 bits (2578), Expect = 0.0
 Identities = 501/557 (89%), Positives = 533/557 (95%)
 Frame = +3

Query: 99   MHAPVLVLNESQKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAAGGIVVTND 278
            MHAPVLVL +S KRESG+KV HANIQA+KAVADIIRTTLGPRSMLKMLLDA+GGIVVTND
Sbjct: 1    MHAPVLVLRDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTND 60

Query: 279  GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHPTVI 458
            GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVI+L GEMLHVAEAFI KSYHPTVI
Sbjct: 61   GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLGGEMLHVAEAFIEKSYHPTVI 120

Query: 459  CRAYNRALEDALTVLDKIAVSIDVNDREMMLGLVKSCIGTKFTSQFGDLIADLAIEATKT 638
            CRAY++ALEDA+ VLDKIAVSIDVNDR  MLGLVKSCIGTKFTSQFGDLIADLAI+AT T
Sbjct: 121  CRAYSKALEDAIAVLDKIAVSIDVNDRPAMLGLVKSCIGTKFTSQFGDLIADLAIDATST 180

Query: 639  VGVDLGQGVREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKILNPRIIL 818
            VGVDLGQG+REVDIKKYIKVEKVPG QLEDS+VLKGVMFNKDVVAPGKM+RKI NPRIIL
Sbjct: 181  VGVDLGQGLREVDIKKYIKVEKVPGSQLEDSKVLKGVMFNKDVVAPGKMKRKIPNPRIIL 240

Query: 819  LDCPLEYKKGENQTNAELVKEEDWGVMLKMEEEYIENICAQILKFKPDLVITEKGLSDLA 998
            LDCP+EYKKGENQTNAELV+EEDW V+LKMEEEYIEN+C QILKFKPDLVITEKGLSDLA
Sbjct: 241  LDCPVEYKKGENQTNAELVREEDWEVLLKMEEEYIENMCVQILKFKPDLVITEKGLSDLA 300

Query: 999  CHFLSKAGVSAIRRLRKTDNNRIAKACGAVVVNRPEELQESDIGTRAGLFEVRKIGDEFF 1178
            CH+LSKAGVSAIRRLRKTDNNRIAKACGA +VNRP+ELQESD+GT AGLFEV+KIGDEFF
Sbjct: 301  CHYLSKAGVSAIRRLRKTDNNRIAKACGATIVNRPDELQESDVGTGAGLFEVKKIGDEFF 360

Query: 1179 AFIVECKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKHPKLVPGGGASELTVSA 1358
            AFIV+CKDPKACTVLLRGASKDLLNEVERNLQDAM+VARNI+K+PKL+PGGGA+ELTVSA
Sbjct: 361  AFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMAVARNILKNPKLLPGGGATELTVSA 420

Query: 1359 TLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENPWIGI 1538
             LKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGEN WIGI
Sbjct: 421  ALKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGI 480

Query: 1539 DGNTGEITDMKGNRIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQPPGAGQGPSK 1718
            DGNTGEITDMK  +IWDAYNVKAQTFKTAIE+ACMLLRIDDIVSGIKKKQ PGA QGPSK
Sbjct: 481  DGNTGEITDMKERKIWDAYNVKAQTFKTAIESACMLLRIDDIVSGIKKKQAPGA-QGPSK 539

Query: 1719 PKVEEEGDADGEQILPE 1769
            PK+E E DAD EQILP+
Sbjct: 540  PKIETEADADSEQILPD 556


>ref|XP_002325286.1| predicted protein [Populus trichocarpa] gi|222862161|gb|EEE99667.1|
            predicted protein [Populus trichocarpa]
          Length = 556

 Score =  995 bits (2573), Expect = 0.0
 Identities = 499/557 (89%), Positives = 533/557 (95%)
 Frame = +3

Query: 99   MHAPVLVLNESQKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAAGGIVVTND 278
            MHAPVLVL +S KRESG KV HANIQA+KAVADIIRTTLGPRSMLKMLLDA+GGIVVTND
Sbjct: 1    MHAPVLVLRDSLKRESGRKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTND 60

Query: 279  GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHPTVI 458
            GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVI+L GEMLHVAEAFI K+YHPTVI
Sbjct: 61   GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLGGEMLHVAEAFIEKNYHPTVI 120

Query: 459  CRAYNRALEDALTVLDKIAVSIDVNDREMMLGLVKSCIGTKFTSQFGDLIADLAIEATKT 638
            CRAY++ALEDA+ V+DKIA+SIDVNDR  MLGLVKSCIGTKFTSQFGDLIADLAI+AT  
Sbjct: 121  CRAYSKALEDAIAVIDKIAMSIDVNDRPTMLGLVKSCIGTKFTSQFGDLIADLAIDATSI 180

Query: 639  VGVDLGQGVREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKILNPRIIL 818
            VGVDLGQG+REVDIKKYIKVEKVPGGQLEDS+VLKGVMFNKDVVAPGKM+RKI+NPRIIL
Sbjct: 181  VGVDLGQGMREVDIKKYIKVEKVPGGQLEDSKVLKGVMFNKDVVAPGKMKRKIVNPRIIL 240

Query: 819  LDCPLEYKKGENQTNAELVKEEDWGVMLKMEEEYIENICAQILKFKPDLVITEKGLSDLA 998
            LDCP+EYKKGENQTNAELV+EEDW V+LKMEEEYIEN+CAQILK KPDLVITEKGLSDLA
Sbjct: 241  LDCPVEYKKGENQTNAELVREEDWEVLLKMEEEYIENMCAQILKLKPDLVITEKGLSDLA 300

Query: 999  CHFLSKAGVSAIRRLRKTDNNRIAKACGAVVVNRPEELQESDIGTRAGLFEVRKIGDEFF 1178
            CH+LSKAGVSAIRRLRKTDNNRIAKACGA +VNRP+ELQESD+GT AGLFEV+KIGDEFF
Sbjct: 301  CHYLSKAGVSAIRRLRKTDNNRIAKACGATIVNRPDELQESDVGTGAGLFEVKKIGDEFF 360

Query: 1179 AFIVECKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKHPKLVPGGGASELTVSA 1358
            AFIV+CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI+K+PKL+PGGGA+ELTVSA
Sbjct: 361  AFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNILKNPKLLPGGGATELTVSA 420

Query: 1359 TLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENPWIGI 1538
             LKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGEN WIGI
Sbjct: 421  ALKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGI 480

Query: 1539 DGNTGEITDMKGNRIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQPPGAGQGPSK 1718
            DGNTGEITDMK  +IWDAYNVKAQTFKTAIE+ACMLLRIDDIVSGIKKKQ PGA QGPSK
Sbjct: 481  DGNTGEITDMKERKIWDAYNVKAQTFKTAIESACMLLRIDDIVSGIKKKQAPGA-QGPSK 539

Query: 1719 PKVEEEGDADGEQILPE 1769
            PK+E E DAD EQILP+
Sbjct: 540  PKIETEADADSEQILPD 556