BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000278
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   187   5e-45
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]      186   9e-45
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   182   2e-43
emb|CBI19566.3| unnamed protein product [Vitis vinifera]              182   2e-43
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   182   2e-43

>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  187 bits (475), Expect = 5e-45
 Identities = 95/154 (61%), Positives = 108/154 (70%)
 Frame = -1

Query: 1139 STKVFRNLQTGESEGYGVINFCTHANAEKVFQTYNGITMPQTEQPFQLNWASSSVCDKRS 960
            S KV RN QTG SEGYG + F THA AEKV Q Y GI MP TEQPF+LNWA+ S  DKRS
Sbjct: 121  SIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRS 180

Query: 959  DLDSEYSLFVGNLAPDVTSTLLGELFLRKYPSVTEANVVFDENTGRSKSIGFVTFSDDNE 780
            D   + S+FVG+LA DVT +LL E F+ KYPSV  A VVFD NTGRSK  GFV F DD+E
Sbjct: 181  DNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSE 240

Query: 779  RSQARTELNGIYFHGRPMHTGFPNRMRSFGSQQQ 678
            R+QA TE+NG+Y   RPM  G     +S G QQQ
Sbjct: 241  RTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 274


>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
          Length = 456

 Score =  186 bits (473), Expect = 9e-45
 Identities = 95/154 (61%), Positives = 110/154 (71%)
 Frame = -1

Query: 1139 STKVFRNLQTGESEGYGVINFCTHANAEKVFQTYNGITMPQTEQPFQLNWASSSVCDKRS 960
            S KV RN QTG SEGYG + F THA AEKV QTY+ +TMP  +QPF+LNWA+ S+ DKR+
Sbjct: 145  SIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQTYSCMTMPNVDQPFRLNWATFSMGDKRA 204

Query: 959  DLDSEYSLFVGNLAPDVTSTLLGELFLRKYPSVTEANVVFDENTGRSKSIGFVTFSDDNE 780
            +  S+ S+FVG+LA DVT TLL E F  KYPSV  A VVFD NTGRSK  GFV F DDNE
Sbjct: 205  NNGSDLSIFVGDLAADVTDTLLHETFATKYPSVKAAKVVFDANTGRSKGYGFVRFGDDNE 264

Query: 779  RSQARTELNGIYFHGRPMHTGFPNRMRSFGSQQQ 678
            RSQA TE+NG+Y   RPM  G     +S G QQQ
Sbjct: 265  RSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 298


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  182 bits (462), Expect = 2e-43
 Identities = 92/154 (59%), Positives = 108/154 (70%)
 Frame = -1

Query: 1139 STKVFRNLQTGESEGYGVINFCTHANAEKVFQTYNGITMPQTEQPFQLNWASSSVCDKRS 960
            S KV RN QTG SEGYG + F +HA AEKV Q Y G+ MP T+QPF+LNWA+ S+ DKRS
Sbjct: 112  SMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRS 171

Query: 959  DLDSEYSLFVGNLAPDVTSTLLGELFLRKYPSVTEANVVFDENTGRSKSIGFVTFSDDNE 780
            D   + S+FVG+LA DV+ +LL E F  KYPSV  A VVFD NTGRSK  GFV F D+NE
Sbjct: 172  DNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENE 231

Query: 779  RSQARTELNGIYFHGRPMHTGFPNRMRSFGSQQQ 678
            RSQA TE+NG+Y   RPM  G     +S G QQQ
Sbjct: 232  RSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 265


>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  182 bits (462), Expect = 2e-43
 Identities = 92/154 (59%), Positives = 108/154 (70%)
 Frame = -1

Query: 1139 STKVFRNLQTGESEGYGVINFCTHANAEKVFQTYNGITMPQTEQPFQLNWASSSVCDKRS 960
            S KV RN QTG SEGYG + F +HA AEKV Q Y G+ MP T+QPF+LNWA+ S+ DKRS
Sbjct: 18   SMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRS 77

Query: 959  DLDSEYSLFVGNLAPDVTSTLLGELFLRKYPSVTEANVVFDENTGRSKSIGFVTFSDDNE 780
            D   + S+FVG+LA DV+ +LL E F  KYPSV  A VVFD NTGRSK  GFV F D+NE
Sbjct: 78   DNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENE 137

Query: 779  RSQARTELNGIYFHGRPMHTGFPNRMRSFGSQQQ 678
            RSQA TE+NG+Y   RPM  G     +S G QQQ
Sbjct: 138  RSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 171


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  182 bits (462), Expect = 2e-43
 Identities = 92/154 (59%), Positives = 108/154 (70%)
 Frame = -1

Query: 1139 STKVFRNLQTGESEGYGVINFCTHANAEKVFQTYNGITMPQTEQPFQLNWASSSVCDKRS 960
            S KV RN QTG SEGYG + F +HA AEKV Q Y G+ MP T+QPF+LNWA+ S+ DKRS
Sbjct: 112  SMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRS 171

Query: 959  DLDSEYSLFVGNLAPDVTSTLLGELFLRKYPSVTEANVVFDENTGRSKSIGFVTFSDDNE 780
            D   + S+FVG+LA DV+ +LL E F  KYPSV  A VVFD NTGRSK  GFV F D+NE
Sbjct: 172  DNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENE 231

Query: 779  RSQARTELNGIYFHGRPMHTGFPNRMRSFGSQQQ 678
            RSQA TE+NG+Y   RPM  G     +S G QQQ
Sbjct: 232  RSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 265