BLASTX nr result

ID: Coptis24_contig00000273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000273
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559006.1| PREDICTED: transcription factor BTF3-like [B...   106   2e-40
ref|XP_002265041.1| PREDICTED: transcription factor BTF3 [Vitis ...   105   2e-40
ref|XP_004137521.1| PREDICTED: transcription factor BTF3-like is...   103   1e-39
dbj|BAK02873.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   5e-39
gb|AAN61483.1| Putative transcription factor [Oryza sativa Japon...   101   1e-38

>ref|XP_003559006.1| PREDICTED: transcription factor BTF3-like [Brachypodium distachyon]
          Length = 169

 Score =  106 bits (265), Expect(2) = 2e-40
 Identities = 55/82 (67%), Positives = 58/82 (70%)
 Frame = +2

Query: 206 IVANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRRLAEQFXXXXXXXXXXXXXXXXX 385
           I ANTWVVSGTPQTKKLQD+LP IINQLGPDNLDNLRRLAEQF                 
Sbjct: 77  IAANTWVVSGTPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQRQVPGAEAGASIGAAQ 136

Query: 386 XXXXVPDLVPGETFEAAAEEKQ 451
               VP+LVPGETFE AAEEK+
Sbjct: 137 DDDDVPELVPGETFEEAAEEKK 158



 Score = 84.3 bits (207), Expect(2) = 2e-40
 Identities = 41/45 (91%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   TTTDDKRLQSTLKRLGVNAIPAIEEVNIFKDDTVIQFQNPKVQAS 135
           TTTDDKRLQSTLKR+GVN IP IEEVNIFKDD VIQFQNPKVQAS
Sbjct: 32  TTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVIQFQNPKVQAS 76


>ref|XP_002265041.1| PREDICTED: transcription factor BTF3 [Vitis vinifera]
           gi|296088008|emb|CBI35291.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  105 bits (263), Expect(2) = 2e-40
 Identities = 55/83 (66%), Positives = 58/83 (69%)
 Frame = +2

Query: 206 IVANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRRLAEQFXXXXXXXXXXXXXXXXX 385
           I ANTWVVSG+PQTKKLQDILPGIINQLGPDNLDNLR+LAEQF                 
Sbjct: 77  IAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPGAGAGAAAAQDD 136

Query: 386 XXXXVPDLVPGETFEAAAEEKQT 454
               VPDLV G+TFEAAAEE  T
Sbjct: 137 DDDEVPDLVAGQTFEAAAEEGHT 159



 Score = 85.1 bits (209), Expect(2) = 2e-40
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   TTTDDKRLQSTLKRLGVNAIPAIEEVNIFKDDTVIQFQNPKVQAS 135
           TTTDDKRLQSTLKR+GVNAIPAIEEVNIFKDD VIQF NPKVQAS
Sbjct: 32  TTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQAS 76


>ref|XP_004137521.1| PREDICTED: transcription factor BTF3-like isoform 1 [Cucumis
           sativus] gi|449439497|ref|XP_004137522.1| PREDICTED:
           transcription factor BTF3-like isoform 2 [Cucumis
           sativus] gi|449503095|ref|XP_004161831.1| PREDICTED:
           transcription factor BTF3-like [Cucumis sativus]
          Length = 163

 Score =  103 bits (256), Expect(2) = 1e-39
 Identities = 56/85 (65%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
 Frame = +2

Query: 206 IVANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRRLAEQF---XXXXXXXXXXXXXX 376
           I ANTWVVSG+PQTKKLQDILPGIINQLGPDNLDNLR+LAEQF                 
Sbjct: 77  IAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPGVGAGAAAAAAN 136

Query: 377 XXXXXXXVPDLVPGETFEAAAEEKQ 451
                  VPDLV G+TFEAAAEEKQ
Sbjct: 137 GEDDDDDVPDLVEGQTFEAAAEEKQ 161



 Score = 85.5 bits (210), Expect(2) = 1e-39
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   TTTDDKRLQSTLKRLGVNAIPAIEEVNIFKDDTVIQFQNPKVQAS 135
           TTTDDKRLQSTLKR+GVNAIPAIEEVNIFKDD VIQF NPKVQAS
Sbjct: 32  TTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFTNPKVQAS 76


>dbj|BAK02873.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  102 bits (253), Expect(2) = 5e-39
 Identities = 55/83 (66%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 IVANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRRLAEQF-XXXXXXXXXXXXXXXX 382
           I ANTWVVSGTPQTKKLQD+LP IINQLGPDNLDNLRRLAEQF                 
Sbjct: 77  IAANTWVVSGTPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQ 136

Query: 383 XXXXXVPDLVPGETFEAAAEEKQ 451
                VP+LVPGETFE AAEEK+
Sbjct: 137 DDDDDVPELVPGETFEEAAEEKK 159



 Score = 84.3 bits (207), Expect(2) = 5e-39
 Identities = 41/45 (91%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   TTTDDKRLQSTLKRLGVNAIPAIEEVNIFKDDTVIQFQNPKVQAS 135
           TTTDDKRLQSTLKR+GVN IP IEEVNIFKDD VIQFQNPKVQAS
Sbjct: 32  TTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVIQFQNPKVQAS 76


>gb|AAN61483.1| Putative transcription factor [Oryza sativa Japonica Group]
          Length = 615

 Score =  101 bits (251), Expect(2) = 1e-38
 Identities = 55/83 (66%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 IVANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRRLAEQF-XXXXXXXXXXXXXXXX 382
           I ANTWVVSGTPQTKKLQD+LP IINQLGPDNLDNLRRLAEQF                 
Sbjct: 517 IGANTWVVSGTPQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQVPGAEAGASAGNAQ 576

Query: 383 XXXXXVPDLVPGETFEAAAEEKQ 451
                VP+LVPGETFE AAEEK+
Sbjct: 577 DDDDDVPELVPGETFEEAAEEKE 599



 Score = 83.6 bits (205), Expect(2) = 1e-38
 Identities = 41/45 (91%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   TTTDDKRLQSTLKRLGVNAIPAIEEVNIFKDDTVIQFQNPKVQAS 135
           TTTDDKRLQSTLKR+GVN IP IEEVNIFKDD VIQFQNPKVQAS
Sbjct: 472 TTTDDKRLQSTLKRVGVNNIPGIEEVNIFKDDVVIQFQNPKVQAS 516


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