BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000272
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform ...   405   e-111
ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis v...   400   e-109
sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|...   400   e-109
ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform ...   400   e-109
gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis]               398   e-108

>ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
            gi|296087487|emb|CBI34076.3| unnamed protein product
            [Vitis vinifera]
          Length = 249

 Score =  405 bits (1042), Expect = e-111
 Identities = 205/238 (86%), Positives = 214/238 (89%)
 Frame = -1

Query: 1080 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 901
            MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60

Query: 900  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 721
            FPMKQGVLTPGRV LLLHRGTPCF                GCIVSQDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVSLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120

Query: 720  DDLPGLTNTERPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 541
             DLPGLT+TE+PRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKI
Sbjct: 121  SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 540  QRLVTPLTLQRKRARIAEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 367
            QRLVTPLTLQRKRARIAEKK R+AKAKSEAA+Y KLLATR KEQ+ERRSESLAK+RSR
Sbjct: 181  QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSR 238


>ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis vinifera]
            gi|302141988|emb|CBI19191.3| unnamed protein product
            [Vitis vinifera]
          Length = 249

 Score =  400 bits (1029), Expect = e-109
 Identities = 202/238 (84%), Positives = 214/238 (89%)
 Frame = -1

Query: 1080 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 901
            MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEF GYVFKIMGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFNGYVFKIMGGCDKQG 60

Query: 900  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 721
            FPMKQGVLTPGRV LLLHRGTPCF                GCIVSQDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVSLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120

Query: 720  DDLPGLTNTERPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 541
             DLPGLT+TE+PRMRGPKRAS IR+LFNLSK+DDVRKYVNTYRR+FT K+GKKCSKAPKI
Sbjct: 121  SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRSFTTKSGKKCSKAPKI 180

Query: 540  QRLVTPLTLQRKRARIAEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 367
            QRLVTPLTLQRKRARIAEKK R+AKAKSEAA+Y KLLATR KEQ+ERRSESLAK+RSR
Sbjct: 181  QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSR 238


>sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|7649387|emb|CAB89081.1| S6
            ribosomal protein [Asparagus officinalis]
          Length = 251

 Score =  400 bits (1028), Expect = e-109
 Identities = 203/238 (85%), Positives = 213/238 (89%)
 Frame = -1

Query: 1080 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 901
            MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEV+GDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 900  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 721
            FPMKQGVLTPGRVRLLLHRGTPCF                GCIVS DLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 720  DDLPGLTNTERPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 541
            +DLPGLT+ E+PRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FTNK GK CSKAPKI
Sbjct: 121  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 540  QRLVTPLTLQRKRARIAEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 367
            QRLVTPLTLQRKRARIAEKK RVAKAKSEAA+Y KLLA+R KEQ++RRSESLAKKRSR
Sbjct: 181  QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSR 238


>ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
            gi|297741825|emb|CBI33138.3| unnamed protein product
            [Vitis vinifera]
          Length = 249

 Score =  400 bits (1028), Expect = e-109
 Identities = 202/238 (84%), Positives = 214/238 (89%)
 Frame = -1

Query: 1080 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 901
            MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 900  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 721
            FPMKQGVLTPGRV+LLLHRGTPCF                GCIVSQDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVQLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120

Query: 720  DDLPGLTNTERPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 541
             +LPGLT+ E+PRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKI
Sbjct: 121  GELPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 540  QRLVTPLTLQRKRARIAEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 367
            QRLVTPLTLQRKRARIAEKK R+AKAKSEAA+Y KLLATR KEQ+ERRSESLAKKRSR
Sbjct: 181  QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKKRSR 238


>gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis]
          Length = 249

 Score =  398 bits (1022), Expect = e-108
 Identities = 200/238 (84%), Positives = 214/238 (89%)
 Frame = -1

Query: 1080 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQG 901
            MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 900  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGE 721
            FPMKQGVLTPGRVRLLLHRGTPCF                GCIVS DLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 720  DDLPGLTNTERPRMRGPKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKI 541
            +DLPGLT+ E+PRMRGPKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKI
Sbjct: 121  NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 540  QRLVTPLTLQRKRARIAEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 367
            QRLVTPLTLQRKRARIAEKK R+AKAK+EAA+Y KLLATR KEQ+ERRSESLAK+RS+
Sbjct: 181  QRLVTPLTLQRKRARIAEKKKRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKRRSK 238