BLASTX nr result

ID: Coptis24_contig00000271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000271
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264782.2| PREDICTED: C2 and GRAM domain-containing pro...   172   2e-44
ref|XP_002329933.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-43
ref|XP_002308750.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-43
ref|NP_171836.3| C2 calcium/lipid-binding and GRAM domain contai...   160   7e-41
ref|XP_002436905.1| hypothetical protein SORBIDRAFT_10g010850 [S...   162   2e-40

>ref|XP_002264782.2| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like
           [Vitis vinifera] gi|297736702|emb|CBI25738.3| unnamed
           protein product [Vitis vinifera]
          Length = 1030

 Score =  172 bits (436), Expect(2) = 2e-44
 Identities = 77/101 (76%), Positives = 92/101 (91%)
 Frame = -1

Query: 752 DPQWNVVFEFDAIDDPPSVMDVEVFDFEEPFSEAKSLGHAEINFVKSYISDLADIWIPLQ 573
           DP WN +FEFDA+D+PPS++DVEV DF+ PF EA SLGHAEINFVK+ +SDLAD+WIPLQ
Sbjct: 594 DPLWNEIFEFDAMDEPPSMLDVEVLDFDGPFDEATSLGHAEINFVKTNLSDLADVWIPLQ 653

Query: 572 GKLAQACQSKLHLKIFMNNTKGNKAMKEYLTKVEKEVGKKV 450
           GKLAQACQSKLHL+IF+NNT+GN  +KEYLTK+EKEVGKK+
Sbjct: 654 GKLAQACQSKLHLRIFLNNTRGNNVVKEYLTKMEKEVGKKI 694



 Score = 33.5 bits (75), Expect(2) = 2e-44
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -2

Query: 355 INMSSPETNTAFQKLFELP 299
           IN+ SP+TN+AFQKLF LP
Sbjct: 694 INLRSPQTNSAFQKLFGLP 712


>ref|XP_002329933.1| predicted protein [Populus trichocarpa] gi|222871955|gb|EEF09086.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  171 bits (432), Expect(2) = 2e-43
 Identities = 75/101 (74%), Positives = 92/101 (91%)
 Frame = -1

Query: 752 DPQWNVVFEFDAIDDPPSVMDVEVFDFEEPFSEAKSLGHAEINFVKSYISDLADIWIPLQ 573
           DP WN +FEFDA+DDPPSV+DV+V+DF+ PF EA SLGH EINFVKS +SDLAD+W+PLQ
Sbjct: 583 DPLWNEIFEFDAMDDPPSVLDVDVYDFDGPFDEAMSLGHTEINFVKSNLSDLADVWVPLQ 642

Query: 572 GKLAQACQSKLHLKIFMNNTKGNKAMKEYLTKVEKEVGKKV 450
           GKLAQACQSKLHL+IF+NNT+G+  +KEYL+K+EKEVGKK+
Sbjct: 643 GKLAQACQSKLHLRIFLNNTRGSNVVKEYLSKMEKEVGKKI 683



 Score = 32.0 bits (71), Expect(2) = 2e-43
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -2

Query: 355 INMSSPETNTAFQKLFELP 299
           IN+ SP+TN+AFQK+F LP
Sbjct: 683 INVRSPQTNSAFQKVFGLP 701


>ref|XP_002308750.1| predicted protein [Populus trichocarpa] gi|222854726|gb|EEE92273.1|
           predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  170 bits (430), Expect(2) = 2e-43
 Identities = 74/101 (73%), Positives = 93/101 (92%)
 Frame = -1

Query: 752 DPQWNVVFEFDAIDDPPSVMDVEVFDFEEPFSEAKSLGHAEINFVKSYISDLADIWIPLQ 573
           DP WN +FEFDA+DDPPSV+DVEV+DF+ PF+E+ SLGH EINFVKS +SDLAD+W+PLQ
Sbjct: 585 DPLWNEIFEFDAMDDPPSVLDVEVYDFDGPFNESMSLGHTEINFVKSNLSDLADVWVPLQ 644

Query: 572 GKLAQACQSKLHLKIFMNNTKGNKAMKEYLTKVEKEVGKKV 450
           GKLAQACQS+LHL+IF+NNT+G+  +KEYL+K+EKEVGKK+
Sbjct: 645 GKLAQACQSRLHLRIFLNNTRGSNVVKEYLSKMEKEVGKKI 685



 Score = 32.3 bits (72), Expect(2) = 2e-43
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -2

Query: 355 INMSSPETNTAFQKLFELP 299
           IN+ SP+TN+AFQK+F LP
Sbjct: 685 INLRSPQTNSAFQKVFGLP 703


>ref|NP_171836.3| C2 calcium/lipid-binding and GRAM domain containing protein
           [Arabidopsis thaliana]
           gi|75315948|sp|Q9ZVT9.4|C2GR1_ARATH RecName: Full=C2 and
           GRAM domain-containing protein At1g03370
           gi|15778696|gb|AAC72128.2| Contains similarity to
           gb|AB011110 KIAA0538 protein from Homo sapiens brain and
           to phospholipid-binding domain C2 PF|00168. ESTs
           gb|AA585988 and gb|T04384 come from this gene
           [Arabidopsis thaliana] gi|21539553|gb|AAM53329.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189444|gb|AEE27565.1| C2 calcium/lipid-binding and
           GRAM domain containing protein [Arabidopsis thaliana]
          Length = 1020

 Score =  160 bits (405), Expect(2) = 7e-41
 Identities = 71/101 (70%), Positives = 90/101 (89%)
 Frame = -1

Query: 752 DPQWNVVFEFDAIDDPPSVMDVEVFDFEEPFSEAKSLGHAEINFVKSYISDLADIWIPLQ 573
           +PQWN +FEFDA+ DPPSV++VEVFDF+ PF EA SLGHAE+NFV+S ISDLAD+W+PLQ
Sbjct: 579 NPQWNEIFEFDAMADPPSVLNVEVFDFDGPFDEAVSLGHAEVNFVRSNISDLADVWVPLQ 638

Query: 572 GKLAQACQSKLHLKIFMNNTKGNKAMKEYLTKVEKEVGKKV 450
           GKLAQACQSKLHL+IF+++T G   +++YL K+EKEVGKK+
Sbjct: 639 GKLAQACQSKLHLRIFLDHTGGGDVVRDYLNKMEKEVGKKI 679



 Score = 33.5 bits (75), Expect(2) = 7e-41
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -2

Query: 355 INMSSPETNTAFQKLFELPR 296
           IN+ SP+TN+AFQKLF LP+
Sbjct: 679 INVRSPQTNSAFQKLFGLPQ 698


>ref|XP_002436905.1| hypothetical protein SORBIDRAFT_10g010850 [Sorghum bicolor]
           gi|241915128|gb|EER88272.1| hypothetical protein
           SORBIDRAFT_10g010850 [Sorghum bicolor]
          Length = 1034

 Score =  162 bits (410), Expect(2) = 2e-40
 Identities = 72/105 (68%), Positives = 94/105 (89%), Gaps = 1/105 (0%)
 Frame = -1

Query: 755 LDPQWNVVFEFDAIDDPPSVMDVEVFDFEEPFSEAKSLGHAEINFVK-SYISDLADIWIP 579
           L+PQWN +FEFDA++DPPSVM++ V+DF+ PF E  SLGHAE+NF+K + IS+LADIWIP
Sbjct: 595 LEPQWNEIFEFDAMEDPPSVMEIHVYDFDGPFDEVASLGHAEVNFLKYNNISELADIWIP 654

Query: 578 LQGKLAQACQSKLHLKIFMNNTKGNKAMKEYLTKVEKEVGKKVCI 444
           L+GKLAQACQSKLHL+IF+NNT+GN+ +K+YL K+EKEVGKK+ +
Sbjct: 655 LKGKLAQACQSKLHLRIFLNNTRGNEVVKDYLDKMEKEVGKKIAM 699



 Score = 30.0 bits (66), Expect(2) = 2e-40
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -2

Query: 355 INMSSPETNTAFQKLFELP 299
           I M SP TN AFQK+F LP
Sbjct: 697 IAMRSPHTNLAFQKIFSLP 715


Top