BLASTX nr result

ID: Coptis24_contig00000267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000267
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523024.1| amino acid binding protein, putative [Ricinu...   403   e-110
gb|AFK46017.1| unknown [Lotus japonicus]                              395   e-107
ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE...   395   e-107
ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE...   393   e-107
ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE...   393   e-107

>ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
            gi|223537746|gb|EEF39366.1| amino acid binding protein,
            putative [Ricinus communis]
          Length = 282

 Score =  403 bits (1035), Expect = e-110
 Identities = 201/245 (82%), Positives = 224/245 (91%)
 Frame = +3

Query: 483  CRRICSRRLSSGAVSILRASSTTAIEDGSSSETDKVPTPKVIIDQDSDPDATIVEITFGD 662
            C++      S   + I +ASS TA+EDGS +ETD VPTPKVIIDQDSDPDAT+VEITFGD
Sbjct: 38   CKQTAGTTGSRRTIIIPQASSATAVEDGSHNETDSVPTPKVIIDQDSDPDATVVEITFGD 97

Query: 663  RLGALLDTMRALTNLGLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPELLEAIRLTII 842
            RLGALLDTM AL NLGLNV KANVFLDSSGKHN F+ITKADTGRKV+DPELLEAIRLTII
Sbjct: 98   RLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSITKADTGRKVEDPELLEAIRLTII 157

Query: 843  NNLLEYHPESSAQLAMGIAFGMEPPKYQIDVDIATHINIYDDGPDRSLLYVESADRPGLL 1022
            NNLL+YHPESS+QLAMG+AFG+EPPK Q+DVDIATHI++YDDGPDRSLL+VE+ADRPGLL
Sbjct: 158  NNLLQYHPESSSQLAMGVAFGVEPPKQQVDVDIATHISVYDDGPDRSLLFVETADRPGLL 217

Query: 1023 VDLVKIITDISVAVESGEFDTEGLLAKAKFHVSYRGKAISKPLQLVLANSLRYYLRRPST 1202
            VDLVKIITDI+VAV+SGEFDTEGLLAKAKFHVSY+GKAI KPLQ VLANSLRY+LRRPST
Sbjct: 218  VDLVKIITDINVAVDSGEFDTEGLLAKAKFHVSYKGKAIIKPLQQVLANSLRYFLRRPST 277

Query: 1203 EDASF 1217
            E+ASF
Sbjct: 278  EEASF 282


>gb|AFK46017.1| unknown [Lotus japonicus]
          Length = 290

 Score =  395 bits (1015), Expect = e-107
 Identities = 204/290 (70%), Positives = 243/290 (83%), Gaps = 5/290 (1%)
 Frame = +3

Query: 363  MAVSIAAGSIGVY----SGLKKIETFVFNGGVCSRSFGNDGVGKCRRICSRRLSSGAVSI 530
            MAV++AA S+G++    + L+ +E  ++   V   S  +D    C  +   RLSS  ++I
Sbjct: 1    MAVAMAACSLGLHLCADNSLRALEKTIWGAPVLKVSSISDTTKPCYILHKTRLSSSRITI 60

Query: 531  L-RASSTTAIEDGSSSETDKVPTPKVIIDQDSDPDATIVEITFGDRLGALLDTMRALTNL 707
            + RA++ T +E G+  ETD VPTP VIIDQDSD DAT+VEITFGDRLGALLDTM AL NL
Sbjct: 61   IPRATAVTDVEGGNQDETDTVPTPVVIIDQDSDTDATVVEITFGDRLGALLDTMNALKNL 120

Query: 708  GLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPELLEAIRLTIINNLLEYHPESSAQLA 887
            GLNVVKANV+LDSSGKHNKFAITKADTGRKVDD ELLEA+R+TI+NN+++YHPESSAQLA
Sbjct: 121  GLNVVKANVYLDSSGKHNKFAITKADTGRKVDDSELLEAVRMTILNNMIQYHPESSAQLA 180

Query: 888  MGIAFGMEPPKYQIDVDIATHINIYDDGPDRSLLYVESADRPGLLVDLVKIITDISVAVE 1067
            +G AFG+ PPK Q+DVDIATH+ I DDGPDRSLLYVE+ADRPGLL+DLV+IITDI++AVE
Sbjct: 181  LGAAFGLVPPKEQVDVDIATHLTISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVE 240

Query: 1068 SGEFDTEGLLAKAKFHVSYRGKAISKPLQLVLANSLRYYLRRPSTEDASF 1217
            SGEFDTEGLLAKAKFHVSY+GKAI KPLQ VLANSLRYYLRRPSTE++SF
Sbjct: 241  SGEFDTEGLLAKAKFHVSYKGKAIIKPLQEVLANSLRYYLRRPSTEESSF 290


>ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
            chloroplastic-like [Cucumis sativus]
          Length = 292

 Score =  395 bits (1014), Expect = e-107
 Identities = 198/236 (83%), Positives = 218/236 (92%)
 Frame = +3

Query: 510  SSGAVSILRASSTTAIEDGSSSETDKVPTPKVIIDQDSDPDATIVEITFGDRLGALLDTM 689
            SS   SI RASS TA+EDGS+ +TD +PTP VIIDQDSD DAT+VEITFGDRLGALLDTM
Sbjct: 57   SSNMKSIPRASSATAVEDGSNGDTDTIPTPIVIIDQDSDQDATVVEITFGDRLGALLDTM 116

Query: 690  RALTNLGLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPELLEAIRLTIINNLLEYHPE 869
             AL NLGLNVVKANVFLDSSGKHN+F+ITKADTGRKVDDPELLEAIRLTIINNL++YHPE
Sbjct: 117  NALKNLGLNVVKANVFLDSSGKHNRFSITKADTGRKVDDPELLEAIRLTIINNLIQYHPE 176

Query: 870  SSAQLAMGIAFGMEPPKYQIDVDIATHINIYDDGPDRSLLYVESADRPGLLVDLVKIITD 1049
            SSAQLAMG AFG+ PPK Q+DVDIATHIN+ DDGPDRSLLYVE+ADRPGLLVDLVKIITD
Sbjct: 177  SSAQLAMGAAFGVVPPKQQVDVDIATHINVQDDGPDRSLLYVETADRPGLLVDLVKIITD 236

Query: 1050 ISVAVESGEFDTEGLLAKAKFHVSYRGKAISKPLQLVLANSLRYYLRRPSTEDASF 1217
            I+VAVESGEFDTEGLLAKAKFHVSYRGK + KPLQ V++NSLRY+LRRP+TE+ASF
Sbjct: 237  INVAVESGEFDTEGLLAKAKFHVSYRGKPLIKPLQQVISNSLRYFLRRPTTEEASF 292


>ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
            chloroplastic-like [Glycine max]
          Length = 291

 Score =  393 bits (1010), Expect = e-107
 Identities = 204/291 (70%), Positives = 238/291 (81%), Gaps = 6/291 (2%)
 Frame = +3

Query: 363  MAVSIAAGSIGVYSGLKKIETFVFNGGVCSRSF--GNDGVGKCRRIC---SRRLS-SGAV 524
            M +++A  S G++    +         +C+  F   + G    +  C   + RLS SG  
Sbjct: 1    MTLAMAVWSAGLHFSAARSSLRPLEKTICTAPFLKASSGFAATKPFCILNTTRLSYSGTT 60

Query: 525  SILRASSTTAIEDGSSSETDKVPTPKVIIDQDSDPDATIVEITFGDRLGALLDTMRALTN 704
             I RA+  T ++DG+  ETD +PTP VIIDQDSDPDAT+VEITFGDRLGALLDTM AL N
Sbjct: 61   IIPRAAPVTDVKDGNQGETDTIPTPVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKN 120

Query: 705  LGLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPELLEAIRLTIINNLLEYHPESSAQL 884
            LGLNVVKANVFLDSSGKHNKF+ITKADTGRKV++PELLEAIRLTIINNL++YHPESS+QL
Sbjct: 121  LGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPELLEAIRLTIINNLIQYHPESSSQL 180

Query: 885  AMGIAFGMEPPKYQIDVDIATHINIYDDGPDRSLLYVESADRPGLLVDLVKIITDISVAV 1064
            A+G AFG+ PPK Q+DVDIATHINI DDGPDRS+LYVE+ADRPGLLVDLVKIITDI++AV
Sbjct: 181  ALGAAFGLLPPKEQVDVDIATHINISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAV 240

Query: 1065 ESGEFDTEGLLAKAKFHVSYRGKAISKPLQLVLANSLRYYLRRPSTEDASF 1217
            ESGEFDTEGLLAKAKFHVSY GKAISKPLQ VLANSLRY+LRRP+TE++SF
Sbjct: 241  ESGEFDTEGLLAKAKFHVSYNGKAISKPLQQVLANSLRYFLRRPTTEESSF 291


>ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
            chloroplastic-like [Vitis vinifera]
            gi|298204773|emb|CBI25271.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  393 bits (1010), Expect = e-107
 Identities = 212/293 (72%), Positives = 240/293 (81%), Gaps = 8/293 (2%)
 Frame = +3

Query: 363  MAVSIAA-GSIGV---YSGLKKIETFVFNGGVCSRSFGNDGVGKCRRICSRRLSSGAVSI 530
            MA+ +A+ G +GV   +S LK +E  +    +C  SFG D    C  +  R  SS +   
Sbjct: 1    MALPVASSGCVGVNSSHSSLKALENPLLC--ICRVSFGWDFHPPCVPLKGRLSSSVSTIT 58

Query: 531  LRASSTTAIEDGSSS----ETDKVPTPKVIIDQDSDPDATIVEITFGDRLGALLDTMRAL 698
             RASS TA++DG       +TD +PTPKVIIDQDSDP+ATIVEITFGDRLGALLDTM AL
Sbjct: 59   PRASSATALKDGKPDGNYDDTDAIPTPKVIIDQDSDPNATIVEITFGDRLGALLDTMNAL 118

Query: 699  TNLGLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPELLEAIRLTIINNLLEYHPESSA 878
             NLGLNVVKANVFLDSSGKHN FAITKADTGRKV+DPELLEAIRLTIINN+L+YHPESS 
Sbjct: 119  KNLGLNVVKANVFLDSSGKHNTFAITKADTGRKVEDPELLEAIRLTIINNMLQYHPESSE 178

Query: 879  QLAMGIAFGMEPPKYQIDVDIATHINIYDDGPDRSLLYVESADRPGLLVDLVKIITDISV 1058
            QLAMG+AFG+ PPK Q+DVDIATHI++ DDGPDRSLLYVE+ADRPGLLVDLVK ITDI++
Sbjct: 179  QLAMGVAFGITPPKQQVDVDIATHISVNDDGPDRSLLYVETADRPGLLVDLVKSITDINI 238

Query: 1059 AVESGEFDTEGLLAKAKFHVSYRGKAISKPLQLVLANSLRYYLRRPSTEDASF 1217
             VESGEFDTEGLLAKAKFHVSYRGKAI KPLQ VL NSLRY+LRRPSTE+ASF
Sbjct: 239  DVESGEFDTEGLLAKAKFHVSYRGKAIIKPLQQVLGNSLRYFLRRPSTEEASF 291


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