BLASTX nr result
ID: Coptis24_contig00000260
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000260 (1005 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like ... 359 7e-97 gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Popu... 352 8e-95 gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab... 352 1e-94 ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|1... 352 1e-94 gb|ACX47456.1| LIM1 [Hevea brasiliensis] 351 1e-94 >ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus] gi|449516649|ref|XP_004165359.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus] Length = 189 Score = 359 bits (921), Expect = 7e-97 Identities = 165/190 (86%), Positives = 181/190 (95%) Frame = +2 Query: 224 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 403 MSFIGTQ+KCK CEKTVY ++QLSADGVSYHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60 Query: 404 HFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 583 HFEQLFKE+GNFN+NFQSP KS KLTPELTRSPSKAAGMFSGTQ+KCATCGKT YPLE Sbjct: 61 HFEQLFKETGNFNKNFQSP-AKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLE 119 Query: 584 KVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASI 763 KVTVE+Q+YHKSCFKCSHGGC+LSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIKSAS+ Sbjct: 120 KVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASM 179 Query: 764 RRAPTPIPDA 793 +R+ P+P+A Sbjct: 180 KRSAAPVPEA 189 >gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Populus alba] Length = 189 Score = 352 bits (903), Expect = 8e-95 Identities = 161/190 (84%), Positives = 179/190 (94%) Frame = +2 Query: 224 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 403 MSF GTQ+KCK CEKTVY M+ LSADGV+YHKSCFKC HCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60 Query: 404 HFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 583 HF+QLFKE+GNFN+NFQSP K+ KLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE Sbjct: 61 HFDQLFKETGNFNKNFQSP-AKTAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 119 Query: 584 KVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASI 763 KVTVE+QAYHKSCFKCSHGGC+++PS+YAAL+G+LYCKHHFSQLFKEKGSYNHLIKSAS+ Sbjct: 120 KVTVESQAYHKSCFKCSHGGCAITPSSYAALEGVLYCKHHFSQLFKEKGSYNHLIKSASM 179 Query: 764 RRAPTPIPDA 793 +RA P+P+A Sbjct: 180 KRAAAPVPEA 189 >gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum] gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein [Nicotiana tabacum] Length = 189 Score = 352 bits (902), Expect = 1e-94 Identities = 164/190 (86%), Positives = 178/190 (93%) Frame = +2 Query: 224 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 403 MSFIGTQ+KCK CEKTVY ++ LSADGV+YHKSCFKC+HCKGTLKLSN+SSMEGVLYCKP Sbjct: 1 MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60 Query: 404 HFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 583 HFEQLFKESGNFN+NFQSP KS KLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE Sbjct: 61 HFEQLFKESGNFNKNFQSP-AKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 119 Query: 584 KVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASI 763 KVTVENQ+YHK+CFKCSHGGCSLSPSNYAAL+GILYCK HFSQLFKEKGSYNHLIKSAS+ Sbjct: 120 KVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPHFSQLFKEKGSYNHLIKSASM 179 Query: 764 RRAPTPIPDA 793 +R +PD+ Sbjct: 180 KRPAATVPDS 189 >ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|118485190|gb|ABK94456.1| unknown [Populus trichocarpa] gi|222851959|gb|EEE89506.1| predicted protein [Populus trichocarpa] Length = 189 Score = 352 bits (902), Expect = 1e-94 Identities = 161/190 (84%), Positives = 177/190 (93%) Frame = +2 Query: 224 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 403 MSF GTQ+KCK CEKTVY M+ LS DGV+YHKSCFKC HCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60 Query: 404 HFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 583 HF+QLFKE+GNFN+NFQSP KS KLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE Sbjct: 61 HFDQLFKETGNFNKNFQSP-AKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 119 Query: 584 KVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASI 763 KVTVE+QAYHKSCFKCSHGGC+++PSNYAAL+G+LYCKHHFSQLFKEKGSYNHLIK AS+ Sbjct: 120 KVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKCASM 179 Query: 764 RRAPTPIPDA 793 +RA P+P+A Sbjct: 180 KRAAAPVPEA 189 >gb|ACX47456.1| LIM1 [Hevea brasiliensis] Length = 189 Score = 351 bits (901), Expect = 1e-94 Identities = 164/190 (86%), Positives = 175/190 (92%) Frame = +2 Query: 224 MSFIGTQEKCKVCEKTVYVMDQLSADGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 403 MSF GTQ+KCK CEKTVY M+ LSADGV YHKSCFKC HCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60 Query: 404 HFEQLFKESGNFNRNFQSPLTKSVSKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLE 583 HFEQLFKE+GNFN+NFQSP KS KLTPELTRSPSKAA MFSGTQEKCATCGKTAYPLE Sbjct: 61 HFEQLFKETGNFNKNFQSP-AKSAEKLTPELTRSPSKAASMFSGTQEKCATCGKTAYPLE 119 Query: 584 KVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASI 763 KVTVE+QAYHKSCFKCSHGGCSLSPSNYAAL+G+LYCKHHFSQLFKEKGSYNHLIK AS+ Sbjct: 120 KVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKCASM 179 Query: 764 RRAPTPIPDA 793 +RA +P+A Sbjct: 180 KRAAASVPEA 189