BLASTX nr result

ID: Coptis24_contig00000254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000254
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY21307.1| pollen allergen Pla o 3 [Platanus orientalis]           96   4e-18
emb|CAL07989.1| lipid transfer protein [Platanus x acerifolia]         94   1e-17
gb|AAL27855.1| lipid transfer protein precursor [Davidia involuc...    94   1e-17
gb|AFI61838.1| harmalin [Peganum harmala]                              92   3e-17
gb|AEN70936.1| lipid transfer protein [Gossypium gossypioides]         92   6e-17

>gb|ABY21307.1| pollen allergen Pla o 3 [Platanus orientalis]
          Length = 118

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/70 (64%), Positives = 55/70 (78%)
 Frame = +2

Query: 41  MANSVVLKVALVIVACMVVAAPSAEAAISCGVVVRSLTPCLTYLQRGGPVPSACCNGVRS 220
           MA S V K+A +++ACMV  AP AEAAI+CG VV  LTPCLTYL+ GG V  ACCNGV++
Sbjct: 1   MAFSRVAKLACLLLACMVATAPHAEAAITCGTVVTRLTPCLTYLRSGGAVAPACCNGVKA 60

Query: 221 LNNAARSTPD 250
           LNN A++TPD
Sbjct: 61  LNNDAKTTPD 70


>emb|CAL07989.1| lipid transfer protein [Platanus x acerifolia]
          Length = 118

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/70 (62%), Positives = 55/70 (78%)
 Frame = +2

Query: 41  MANSVVLKVALVIVACMVVAAPSAEAAISCGVVVRSLTPCLTYLQRGGPVPSACCNGVRS 220
           MA S V K+A +++ACMV  AP AEAAI+CG VV  LTPCLT+L+ GG V  ACCNGV++
Sbjct: 1   MAFSRVAKLACLLLACMVATAPHAEAAITCGTVVTRLTPCLTFLRSGGAVAPACCNGVKA 60

Query: 221 LNNAARSTPD 250
           LNN A++TPD
Sbjct: 61  LNNDAKTTPD 70


>gb|AAL27855.1| lipid transfer protein precursor [Davidia involucrata]
          Length = 120

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = +2

Query: 47  NSVVLKVALV-IVACMVVAAPSAEAAISCGVVVRSLTPCLTYLQRGGPVPSACCNGVRSL 223
           + VV+KV +V ++ CMVV+AP AEAAI+CG V  SL PCL YL++GGPVP ACCNG++SL
Sbjct: 4   SGVVIKVGIVAVLMCMVVSAPHAEAAITCGTVTVSLAPCLNYLKKGGPVPPACCNGIKSL 63

Query: 224 NNAARSTPD 250
           N AA++T D
Sbjct: 64  NAAAKTTAD 72


>gb|AFI61838.1| harmalin [Peganum harmala]
          Length = 115

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +2

Query: 59  LKVALVIVACMVVAAPSAEAAISCGVVVRSLTPCLTYLQRGGPVPSACCNGVRSLNNAAR 238
           +K+   +VACM+VAAP  EAAI+CG VV +L+PC+ YL+ GG  P ACCNGVR+LNNAAR
Sbjct: 4   IKLVCALVACMLVAAPLTEAAIACGTVVSALSPCIGYLRAGGSPPLACCNGVRALNNAAR 63

Query: 239 STPD 250
           +TPD
Sbjct: 64  TTPD 67


>gb|AEN70936.1| lipid transfer protein [Gossypium gossypioides]
          Length = 119

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/71 (56%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
 Frame = +2

Query: 41  MANSVVLKVALVIVACMVVAAPSAEAAISCGVVVRSLTPCLTYLQ-RGGPVPSACCNGVR 217
           M++S+ LK+A V+V CMV+ AP A+ A++CG V  SL PC+TYL+ +GGPVP  CC G++
Sbjct: 1   MSSSMSLKLACVVVLCMVLGAPLAQGAVTCGQVTTSLAPCITYLRGKGGPVPQGCCGGIK 60

Query: 218 SLNNAARSTPD 250
           SLN+AA++TPD
Sbjct: 61  SLNSAAQTTPD 71


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