BLASTX nr result

ID: Coptis24_contig00000253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000253
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY21307.1| pollen allergen Pla o 3 [Platanus orientalis]           94   1e-17
gb|AAL27855.1| lipid transfer protein precursor [Davidia involuc...    93   3e-17
emb|CAL07989.1| lipid transfer protein [Platanus x acerifolia]         92   3e-17
gb|AEN70936.1| lipid transfer protein [Gossypium gossypioides]         89   3e-16
gb|ACM78613.1| lipid transfer protein 1 [Tamarix hispida]              89   4e-16

>gb|ABY21307.1| pollen allergen Pla o 3 [Platanus orientalis]
          Length = 118

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/70 (62%), Positives = 55/70 (78%)
 Frame = +3

Query: 42  MANSVVLKVALVIVACMVVAAPSAEAAMSCGVVVNRLTPCLTYLQRGGPVPSACCNGVRS 221
           MA S V K+A +++ACMV  AP AEAA++CG VV RLTPCLTYL+ GG V  ACCNGV++
Sbjct: 1   MAFSRVAKLACLLLACMVATAPHAEAAITCGTVVTRLTPCLTYLRSGGAVAPACCNGVKA 60

Query: 222 LNAAARSTPD 251
           LN  A++TPD
Sbjct: 61  LNNDAKTTPD 70


>gb|AAL27855.1| lipid transfer protein precursor [Davidia involucrata]
          Length = 120

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = +3

Query: 48  NSVVLKVALV-IVACMVVAAPSAEAAMSCGVVVNRLTPCLTYLQRGGPVPSACCNGVRSL 224
           + VV+KV +V ++ CMVV+AP AEAA++CG V   L PCL YL++GGPVP ACCNG++SL
Sbjct: 4   SGVVIKVGIVAVLMCMVVSAPHAEAAITCGTVTVSLAPCLNYLKKGGPVPPACCNGIKSL 63

Query: 225 NAAARSTPD 251
           NAAA++T D
Sbjct: 64  NAAAKTTAD 72


>emb|CAL07989.1| lipid transfer protein [Platanus x acerifolia]
          Length = 118

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = +3

Query: 42  MANSVVLKVALVIVACMVVAAPSAEAAMSCGVVVNRLTPCLTYLQRGGPVPSACCNGVRS 221
           MA S V K+A +++ACMV  AP AEAA++CG VV RLTPCLT+L+ GG V  ACCNGV++
Sbjct: 1   MAFSRVAKLACLLLACMVATAPHAEAAITCGTVVTRLTPCLTFLRSGGAVAPACCNGVKA 60

Query: 222 LNAAARSTPD 251
           LN  A++TPD
Sbjct: 61  LNNDAKTTPD 70


>gb|AEN70936.1| lipid transfer protein [Gossypium gossypioides]
          Length = 119

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/71 (54%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
 Frame = +3

Query: 42  MANSVVLKVALVIVACMVVAAPSAEAAMSCGVVVNRLTPCLTYLQ-RGGPVPSACCNGVR 218
           M++S+ LK+A V+V CMV+ AP A+ A++CG V   L PC+TYL+ +GGPVP  CC G++
Sbjct: 1   MSSSMSLKLACVVVLCMVLGAPLAQGAVTCGQVTTSLAPCITYLRGKGGPVPQGCCGGIK 60

Query: 219 SLNAAARSTPD 251
           SLN+AA++TPD
Sbjct: 61  SLNSAAQTTPD 71


>gb|ACM78613.1| lipid transfer protein 1 [Tamarix hispida]
          Length = 118

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 37/70 (52%), Positives = 52/70 (74%)
 Frame = +3

Query: 42  MANSVVLKVALVIVACMVVAAPSAEAAMSCGVVVNRLTPCLTYLQRGGPVPSACCNGVRS 221
           M +S+ +K+A V+  CMVV+ P  EAA++CG+V  +L PCLT+LQRGGP  + CC  ++S
Sbjct: 1   MGSSLAIKLACVVAMCMVVSLPYTEAAITCGMVTQKLAPCLTFLQRGGPPAAGCCGAIKS 60

Query: 222 LNAAARSTPD 251
           LN+  RSTPD
Sbjct: 61  LNSMVRSTPD 70


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