BLASTX nr result

ID: Coptis24_contig00000246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000246
         (2007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266494.2| PREDICTED: transketolase, chloroplastic-like...   754   0.0  
ref|XP_004133921.1| PREDICTED: transketolase, chloroplastic-like...   749   0.0  
ref|XP_003536788.1| PREDICTED: transketolase, chloroplastic-like...   752   0.0  
ref|XP_003592793.1| Transketolase [Medicago truncatula] gi|35748...   749   0.0  
ref|XP_003521870.1| PREDICTED: transketolase, chloroplastic-like...   749   0.0  

>ref|XP_002266494.2| PREDICTED: transketolase, chloroplastic-like [Vitis vinifera]
          Length = 729

 Score =  754 bits (1947), Expect(2) = 0.0
 Identities = 377/441 (85%), Positives = 399/441 (90%)
 Frame = +3

Query: 300  YDEIRAAIEEAKSVKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRQNLGWP 479
            YDEIRAAI+EAK+VKDKPTLIKVTTTIG+GSPNKANSYSVHGSALGAKEVDATR+NLGWP
Sbjct: 288  YDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHGSALGAKEVDATRKNLGWP 347

Query: 480  YEPFHVPEDVKKHWSRHIPEGASLEAEWNXXXXXXXXXXXXXXXXLKSLITGELPTGWEK 659
            +EPFHVPEDVKKHWSRHIP+GA+LEAEWN                LKS+ITGELP GW+K
Sbjct: 348  HEPFHVPEDVKKHWSRHIPDGAALEAEWNAKFAEYEKKYKEEAAELKSIITGELPAGWDK 407

Query: 660  ALPKYTPEIPGDATRNLSQACLNALAPVLPGLVGGSADLASSNMTLLKMFGDFQKNTPEE 839
            ALP YTPE   DATRNLSQ CLNALA VLPGL+GGSADLASSNMTLLKMFGDFQK TPEE
Sbjct: 408  ALPTYTPESAADATRNLSQQCLNALAKVLPGLLGGSADLASSNMTLLKMFGDFQKGTPEE 467

Query: 840  RNIRFGVREHAMGAICNGICLHSPGYIPYCATFFVFTDYMRAAIRISALSESGVIYVMTH 1019
            RN+RFGVREH MGAICNGI LHS G IPYCATFFVFTDYMRAAIRISALSE+GVIYVMTH
Sbjct: 468  RNVRFGVREHGMGAICNGIALHSLGLIPYCATFFVFTDYMRAAIRISALSEAGVIYVMTH 527

Query: 1020 DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVDNRKRPSILALSRQ 1199
            DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAV NRKRPSILALSRQ
Sbjct: 528  DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVNRKRPSILALSRQ 587

Query: 1200 KLPNLLGTSIEGVEKGGYIISDNSTGNKPDVILTATGSELEIASKAADELRKEGKTVRVV 1379
            KLP L GTSI GVEKGGY ISDNS+GNKPDVIL  TGSELEIA+KA DELRKEGKTVRVV
Sbjct: 588  KLPQLPGTSIAGVEKGGYAISDNSSGNKPDVILIGTGSELEIAAKAGDELRKEGKTVRVV 647

Query: 1380 SLVSWELYEERSDEYKESVFPAAVTARVSIEAGSTFGWHKIVGSGGKAIGIDKFGASAPA 1559
            SLVSWEL++++SD YKESV PAAVTARVSIEAGSTFGW KIVGS GKAIGID+FGASAPA
Sbjct: 648  SLVSWELFDDQSDAYKESVLPAAVTARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPA 707

Query: 1560 GKIYKEYGITAEAVIAAAKSL 1622
            GKIYKE+GIT EAVI AAK++
Sbjct: 708  GKIYKEFGITVEAVIEAAKAV 728



 Score =  162 bits (410), Expect(2) = 0.0
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +1

Query: 1   DHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDTRF 180
           DHYTY ILGDGCQMEGISNE CSLAGHWGLGKLIAFYDDNHISIDGDT IAFTESVDTRF
Sbjct: 212 DHYTYVILGDGCQMEGISNEVCSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVDTRF 271

Query: 181 EGLGWHVIWVKNGNTG 228
           EGLGWHVIWVKNGNTG
Sbjct: 272 EGLGWHVIWVKNGNTG 287


>ref|XP_004133921.1| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus]
            gi|449480047|ref|XP_004155784.1| PREDICTED:
            transketolase, chloroplastic-like [Cucumis sativus]
            gi|351735634|gb|AEQ59483.1| chloroplast transketolase
            [Cucumis sativus]
          Length = 742

 Score =  749 bits (1935), Expect(2) = 0.0
 Identities = 369/441 (83%), Positives = 396/441 (89%)
 Frame = +3

Query: 300  YDEIRAAIEEAKSVKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRQNLGWP 479
            YDEIRAAI+EAK+VKDKPT+IKVTTTIGFGSPNKANSYSVHGSALGAKEV+ATR NLGWP
Sbjct: 301  YDEIRAAIQEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRSNLGWP 360

Query: 480  YEPFHVPEDVKKHWSRHIPEGASLEAEWNXXXXXXXXXXXXXXXXLKSLITGELPTGWEK 659
            YEPFHVPEDV+KHWSRH P GA  EAEWN                LKS+ITGELP GWE 
Sbjct: 361  YEPFHVPEDVQKHWSRHTPLGADFEAEWNAKFAEYEKKYPEEAAELKSIITGELPAGWED 420

Query: 660  ALPKYTPEIPGDATRNLSQACLNALAPVLPGLVGGSADLASSNMTLLKMFGDFQKNTPEE 839
            ALPKYTPE PGDATRNLSQ CLNALA VLPG +GGSADLASSNMTLLKM+GDFQKNTPEE
Sbjct: 421  ALPKYTPESPGDATRNLSQQCLNALAKVLPGFLGGSADLASSNMTLLKMYGDFQKNTPEE 480

Query: 840  RNIRFGVREHAMGAICNGICLHSPGYIPYCATFFVFTDYMRAAIRISALSESGVIYVMTH 1019
            RN+RFGVREH MGAICNGI LHSPG+IPYCATFFVFTDYMRAA+RISALSE+GVIYVMTH
Sbjct: 481  RNLRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAMRISALSEAGVIYVMTH 540

Query: 1020 DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVDNRKRPSILALSRQ 1199
            DSIGLGEDGPTHQPIEHLASFRAMPNILM RPADGNETAGAYKVAV NRKRPSI+ALSRQ
Sbjct: 541  DSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVVNRKRPSIMALSRQ 600

Query: 1200 KLPNLLGTSIEGVEKGGYIISDNSTGNKPDVILTATGSELEIASKAADELRKEGKTVRVV 1379
            KLP+L GTSIEGVEKGGYI+SDNS+GNKPDVIL  TGSELEIA +A +ELRKEGK VRVV
Sbjct: 601  KLPHLPGTSIEGVEKGGYIVSDNSSGNKPDVILIGTGSELEIAFQAGEELRKEGKAVRVV 660

Query: 1380 SLVSWELYEERSDEYKESVFPAAVTARVSIEAGSTFGWHKIVGSGGKAIGIDKFGASAPA 1559
            S VSWEL++++SD YKESV P AVTARVSIEAGSTFGW KIVGS GKAIGID+FGASAPA
Sbjct: 661  SFVSWELFDDQSDAYKESVLPEAVTARVSIEAGSTFGWGKIVGSKGKAIGIDRFGASAPA 720

Query: 1560 GKIYKEYGITAEAVIAAAKSL 1622
            GKIYKE+G+T EAV+AAA+ L
Sbjct: 721  GKIYKEFGLTVEAVVAAAREL 741



 Score =  160 bits (405), Expect(2) = 0.0
 Identities = 72/76 (94%), Positives = 73/76 (96%)
 Frame = +1

Query: 1   DHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDTRF 180
           DHYTY ILGDGCQMEGI+NEACSLAGHWGLGKLIA YDDNHISIDGDT IAFTESVDTRF
Sbjct: 225 DHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIALYDDNHISIDGDTEIAFTESVDTRF 284

Query: 181 EGLGWHVIWVKNGNTG 228
           EGLGWHVIWVKNGNTG
Sbjct: 285 EGLGWHVIWVKNGNTG 300


>ref|XP_003536788.1| PREDICTED: transketolase, chloroplastic-like [Glycine max]
          Length = 742

 Score =  752 bits (1942), Expect(2) = 0.0
 Identities = 375/441 (85%), Positives = 396/441 (89%)
 Frame = +3

Query: 300  YDEIRAAIEEAKSVKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRQNLGWP 479
            YDEIRAAI+EAK+VKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATR+NLGWP
Sbjct: 301  YDEIRAAIKEAKAVKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWP 360

Query: 480  YEPFHVPEDVKKHWSRHIPEGASLEAEWNXXXXXXXXXXXXXXXXLKSLITGELPTGWEK 659
            YEPFHVPEDVKKHWSRH PEGA LEAEWN                LK++ITGELP GWEK
Sbjct: 361  YEPFHVPEDVKKHWSRHTPEGAKLEAEWNAKFVEYEKQYSEEAAELKAIITGELPAGWEK 420

Query: 660  ALPKYTPEIPGDATRNLSQACLNALAPVLPGLVGGSADLASSNMTLLKMFGDFQKNTPEE 839
            ALP YTPE P DATRNLSQ  LNAL  VLPGL+GGSADLASSNMTLLK +GDFQKNTPEE
Sbjct: 421  ALPTYTPESPADATRNLSQQNLNALVKVLPGLLGGSADLASSNMTLLKSYGDFQKNTPEE 480

Query: 840  RNIRFGVREHAMGAICNGICLHSPGYIPYCATFFVFTDYMRAAIRISALSESGVIYVMTH 1019
            RN+RFGVREH MGAICNGI LHSPG+IPYCATFFVFTDYMRAAIRISAL E+GVIYVMTH
Sbjct: 481  RNVRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTH 540

Query: 1020 DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVDNRKRPSILALSRQ 1199
            DSIGLGEDGPTHQPIEHLASFRAMPN LMLRPADGNETAG+YKVAV NRKRPSILALSRQ
Sbjct: 541  DSIGLGEDGPTHQPIEHLASFRAMPNTLMLRPADGNETAGSYKVAVVNRKRPSILALSRQ 600

Query: 1200 KLPNLLGTSIEGVEKGGYIISDNSTGNKPDVILTATGSELEIASKAADELRKEGKTVRVV 1379
            KL  L GTSIEGVEKGGY ISDNS+GNKPDVIL  TGSELEIA+ AA++LRKEGK VRVV
Sbjct: 601  KLTQLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEIAAAAAEDLRKEGKAVRVV 660

Query: 1380 SLVSWELYEERSDEYKESVFPAAVTARVSIEAGSTFGWHKIVGSGGKAIGIDKFGASAPA 1559
            S VSWEL++E+SDEYKESV PA+VTARVSIEAGSTFGWHKIVGS GKAIGID+FGASAPA
Sbjct: 661  SFVSWELFDEQSDEYKESVLPASVTARVSIEAGSTFGWHKIVGSKGKAIGIDRFGASAPA 720

Query: 1560 GKIYKEYGITAEAVIAAAKSL 1622
            GKIYKE+GIT EAVIAAAK L
Sbjct: 721  GKIYKEFGITKEAVIAAAKEL 741



 Score =  155 bits (393), Expect(2) = 0.0
 Identities = 70/76 (92%), Positives = 71/76 (93%)
 Frame = +1

Query: 1   DHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDTRF 180
           DHYTY ILGDGCQMEGISNEACSLAGHWGLGKLIA YDDNHISIDGDT IAFTE+VD RF
Sbjct: 225 DHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIALYDDNHISIDGDTEIAFTENVDQRF 284

Query: 181 EGLGWHVIWVKNGNTG 228
           E LGWHVIWVKNGNTG
Sbjct: 285 EALGWHVIWVKNGNTG 300


>ref|XP_003592793.1| Transketolase [Medicago truncatula] gi|357489017|ref|XP_003614796.1|
            Transketolase [Medicago truncatula]
            gi|355481841|gb|AES63044.1| Transketolase [Medicago
            truncatula] gi|355516131|gb|AES97754.1| Transketolase
            [Medicago truncatula]
          Length = 735

 Score =  749 bits (1934), Expect(2) = 0.0
 Identities = 372/441 (84%), Positives = 397/441 (90%)
 Frame = +3

Query: 300  YDEIRAAIEEAKSVKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRQNLGWP 479
            YDEIRAAI+EAK+V DKPTLIKVTTTIGFGSPNKANSYSVHG+ALGAKEVDATRQNLGWP
Sbjct: 294  YDEIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGAALGAKEVDATRQNLGWP 353

Query: 480  YEPFHVPEDVKKHWSRHIPEGASLEAEWNXXXXXXXXXXXXXXXXLKSLITGELPTGWEK 659
            YEPFHVPEDVKKHWSRH PEGA+LEAEWN                LK++I  ELP  WEK
Sbjct: 354  YEPFHVPEDVKKHWSRHTPEGAALEAEWNAKFAEYEKKYKEEAAELKAIINRELPADWEK 413

Query: 660  ALPKYTPEIPGDATRNLSQACLNALAPVLPGLVGGSADLASSNMTLLKMFGDFQKNTPEE 839
            ALP YTPE P DATRNLSQ  LNALA VLPGL+GGSADLASSNMTLLK FGDFQK TPEE
Sbjct: 414  ALPTYTPETPADATRNLSQQNLNALAKVLPGLIGGSADLASSNMTLLKSFGDFQKATPEE 473

Query: 840  RNIRFGVREHAMGAICNGICLHSPGYIPYCATFFVFTDYMRAAIRISALSESGVIYVMTH 1019
            RN+RFGVREHAMGAICNGI LHSPG+IPYCATFFVFTDYMRAAIRISAL E+GVIYVMTH
Sbjct: 474  RNVRFGVREHAMGAICNGIALHSPGFIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTH 533

Query: 1020 DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVDNRKRPSILALSRQ 1199
            DSIGLGEDGPTHQPIEHLASFRAMPN+LMLRPADGNETAG+Y+VAV N+KRPSILALSRQ
Sbjct: 534  DSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYRVAVLNQKRPSILALSRQ 593

Query: 1200 KLPNLLGTSIEGVEKGGYIISDNSTGNKPDVILTATGSELEIASKAADELRKEGKTVRVV 1379
            KLPNL GTSIEGVEKGGY ISDNS+GNKPDVIL  TGSELEIA+ AAD+LRKEGKTVRVV
Sbjct: 594  KLPNLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEIAAAAADDLRKEGKTVRVV 653

Query: 1380 SLVSWELYEERSDEYKESVFPAAVTARVSIEAGSTFGWHKIVGSGGKAIGIDKFGASAPA 1559
            S VSWEL++++SDEYKESV PA+VTARVSIEAGSTFGWHKIVGS GK IGID+FGASAPA
Sbjct: 654  SFVSWELFDDQSDEYKESVLPASVTARVSIEAGSTFGWHKIVGSKGKTIGIDRFGASAPA 713

Query: 1560 GKIYKEYGITAEAVIAAAKSL 1622
            GKIYKEYGIT EAVI+AAK +
Sbjct: 714  GKIYKEYGITKEAVISAAKEV 734



 Score =  158 bits (399), Expect(2) = 0.0
 Identities = 71/76 (93%), Positives = 72/76 (94%)
 Frame = +1

Query: 1   DHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDTRF 180
           DHYTY ILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTE+VD RF
Sbjct: 218 DHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQRF 277

Query: 181 EGLGWHVIWVKNGNTG 228
           E LGWHVIWVKNGNTG
Sbjct: 278 EALGWHVIWVKNGNTG 293


>ref|XP_003521870.1| PREDICTED: transketolase, chloroplastic-like [Glycine max]
          Length = 731

 Score =  749 bits (1935), Expect(2) = 0.0
 Identities = 373/442 (84%), Positives = 398/442 (90%)
 Frame = +3

Query: 300  YDEIRAAIEEAKSVKDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRQNLGWP 479
            YD+IRAAI+EAK+VKDKPTLIKVTTTIG+GSPNKANSYSVHGSALGAKEVDATRQNLGW 
Sbjct: 290  YDDIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHGSALGAKEVDATRQNLGWS 349

Query: 480  YEPFHVPEDVKKHWSRHIPEGASLEAEWNXXXXXXXXXXXXXXXXLKSLITGELPTGWEK 659
            +EPFHVPEDVKKHWSRH PEGA+LEAEWN                LKS+I GE P GWEK
Sbjct: 350  HEPFHVPEDVKKHWSRHTPEGAALEAEWNAKFAEYEKKYKEEAAELKSIINGEFPAGWEK 409

Query: 660  ALPKYTPEIPGDATRNLSQACLNALAPVLPGLVGGSADLASSNMTLLKMFGDFQKNTPEE 839
            ALP YTPE P DATRNLSQ  LNALA VLPGL+GGSADLASSNMTLLKMFGDFQK+TP E
Sbjct: 410  ALPTYTPESPADATRNLSQTNLNALAKVLPGLLGGSADLASSNMTLLKMFGDFQKDTPAE 469

Query: 840  RNIRFGVREHAMGAICNGICLHSPGYIPYCATFFVFTDYMRAAIRISALSESGVIYVMTH 1019
            RN+RFGVREH MGAICNGI LHSPG IPYCATFFVFTDYMR AIR+SALSE+GVIYVMTH
Sbjct: 470  RNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYVMTH 529

Query: 1020 DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVDNRKRPSILALSRQ 1199
            DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAV NRKRPSILALSRQ
Sbjct: 530  DSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQ 589

Query: 1200 KLPNLLGTSIEGVEKGGYIISDNSTGNKPDVILTATGSELEIASKAADELRKEGKTVRVV 1379
            KLP L GTSIEGVEKGGY ISDNSTGNKPDVIL  TGSELEIA+KAAD+LRKEGK VRVV
Sbjct: 590  KLPQLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIAAKAADDLRKEGKAVRVV 649

Query: 1380 SLVSWELYEERSDEYKESVFPAAVTARVSIEAGSTFGWHKIVGSGGKAIGIDKFGASAPA 1559
            SLVSWEL++E+S+ YKESVFPAAV+ARVSIEAGSTFGW KIVG+ GKAIGID+FGASAPA
Sbjct: 650  SLVSWELFDEQSEAYKESVFPAAVSARVSIEAGSTFGWEKIVGAKGKAIGIDRFGASAPA 709

Query: 1560 GKIYKEYGITAEAVIAAAKSLL 1625
            G+IYKE+GIT EAV+AAAK L+
Sbjct: 710  GRIYKEFGITKEAVVAAAKELI 731



 Score =  157 bits (398), Expect(2) = 0.0
 Identities = 70/76 (92%), Positives = 73/76 (96%)
 Frame = +1

Query: 1   DHYTYCILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDTRF 180
           DHYTY ILGDGCQMEGI+NEACSLAGHWGLGKLIAFYDDNHISIDG+T IAFTESVD+RF
Sbjct: 214 DHYTYAILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTEIAFTESVDSRF 273

Query: 181 EGLGWHVIWVKNGNTG 228
           EGLGWHVIWVKNGN G
Sbjct: 274 EGLGWHVIWVKNGNNG 289


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