BLASTX nr result

ID: Coptis24_contig00000244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000244
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33643.3| unnamed protein product [Vitis vinifera]              325   7e-87
ref|XP_002278371.1| PREDICTED: 40S ribosomal protein S7 isoform ...   325   9e-87
ref|XP_003534165.1| PREDICTED: 40S ribosomal protein S7 [Glycine...   325   1e-86
ref|NP_001235883.1| uncharacterized protein LOC100527680 [Glycin...   323   3e-86
gb|ACU13510.1| unknown [Glycine max]                                  323   3e-86

>emb|CBI33643.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  325 bits (834), Expect = 7e-87
 Identities = 161/203 (79%), Positives = 187/203 (92%)
 Frame = +3

Query: 51  RASILVLRFIKMFTGRRKIQKDKDADLSEFEETVAQSFFDLENTNAGELKTELKDLYINS 230
           R ++   R +KM++  RKIQKDK A+ SEFEETVAQ+ FDLENT   ELK++LKDL+INS
Sbjct: 54  RTALPPQRSVKMYSASRKIQKDKGAEPSEFEETVAQALFDLENT-VPELKSDLKDLFINS 112

Query: 231 ALQIDVSGNRKAVVIHVPYRLRKAFRKIHVKLVRELEKKFSGKDVILIATRRILRPPKKG 410
           A QID+SGNRKA+V+HVPYRLRK +RKIH+KLVRELEKKFSGK+V+LIATRRI+RPPKKG
Sbjct: 113 ASQIDISGNRKAIVVHVPYRLRKGYRKIHLKLVRELEKKFSGKEVVLIATRRIVRPPKKG 172

Query: 411 SAVQRPRSRTLTAVHDAVLEDVVYPAEIVGKRIKYRLDGSKIMKVFLDPKERNNTEYKLE 590
           SAVQRPRSRTLT+VH+A+LED+VYPAEIVGKRI+YRLDGSKI+K+FLDPKERNNTEYKLE
Sbjct: 173 SAVQRPRSRTLTSVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYKLE 232

Query: 591 TFAGVYRKLSGKDVVFEYPVIEA 659
           TFAGVYRKLSGKDVVFEYP+ EA
Sbjct: 233 TFAGVYRKLSGKDVVFEYPLTEA 255


>ref|XP_002278371.1| PREDICTED: 40S ribosomal protein S7 isoform 1 [Vitis vinifera]
           gi|147789484|emb|CAN71757.1| hypothetical protein
           VITISV_000603 [Vitis vinifera]
           gi|297734220|emb|CBI15467.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score =  325 bits (833), Expect = 9e-87
 Identities = 161/192 (83%), Positives = 182/192 (94%)
 Frame = +3

Query: 84  MFTGRRKIQKDKDADLSEFEETVAQSFFDLENTNAGELKTELKDLYINSALQIDVSGNRK 263
           M+T  RKIQKDKD++ +EFEE+VAQ+FFDLENTN  E+K++LKDLYINSALQ+DVSG RK
Sbjct: 1   MYTAARKIQKDKDSEPTEFEESVAQAFFDLENTNP-EIKSDLKDLYINSALQVDVSGTRK 59

Query: 264 AVVIHVPYRLRKAFRKIHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTL 443
           AVVIH+PYRLRKAFRKIHV+LVRELEKKFSGKDVI IATRRI+RPPKKGSAVQRPRSRTL
Sbjct: 60  AVVIHIPYRLRKAFRKIHVRLVRELEKKFSGKDVIFIATRRIVRPPKKGSAVQRPRSRTL 119

Query: 444 TAVHDAVLEDVVYPAEIVGKRIKYRLDGSKIMKVFLDPKERNNTEYKLETFAGVYRKLSG 623
           T+VH+A+LED+V PAEIVGKRI+YRLDGSKI+K+FLDPKERNNTEYKLETFA VYRKLSG
Sbjct: 120 TSVHEAMLEDIVLPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYKLETFAAVYRKLSG 179

Query: 624 KDVVFEYPVIEA 659
           KDVVFEYP+ EA
Sbjct: 180 KDVVFEYPLTEA 191


>ref|XP_003534165.1| PREDICTED: 40S ribosomal protein S7 [Glycine max]
          Length = 191

 Score =  325 bits (832), Expect = 1e-86
 Identities = 161/192 (83%), Positives = 180/192 (93%)
 Frame = +3

Query: 84  MFTGRRKIQKDKDADLSEFEETVAQSFFDLENTNAGELKTELKDLYINSALQIDVSGNRK 263
           M+T R+KI KDKDA+ +EFEE+V Q+ FDLENTN  ELK++LKDLYINSA+QIDVSGNRK
Sbjct: 1   MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTN-NELKSDLKDLYINSAVQIDVSGNRK 59

Query: 264 AVVIHVPYRLRKAFRKIHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTL 443
           AVVIHVPYRLRK FRKIHV+LVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPR+RTL
Sbjct: 60  AVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRTRTL 119

Query: 444 TAVHDAVLEDVVYPAEIVGKRIKYRLDGSKIMKVFLDPKERNNTEYKLETFAGVYRKLSG 623
           TAVH+A+LED+V PAEIVGKR++Y++DGSKIMKVFLDPKERNNTEYKLETFA VYRKLSG
Sbjct: 120 TAVHEAMLEDIVLPAEIVGKRVRYKIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSG 179

Query: 624 KDVVFEYPVIEA 659
           KD+VFEYP  EA
Sbjct: 180 KDIVFEYPTTEA 191


>ref|NP_001235883.1| uncharacterized protein LOC100527680 [Glycine max]
           gi|255632936|gb|ACU16822.1| unknown [Glycine max]
          Length = 191

 Score =  323 bits (829), Expect = 3e-86
 Identities = 161/192 (83%), Positives = 180/192 (93%)
 Frame = +3

Query: 84  MFTGRRKIQKDKDADLSEFEETVAQSFFDLENTNAGELKTELKDLYINSALQIDVSGNRK 263
           M+T R+KI KDKDA+ +EFEE+V Q+ FDLENTN  ELK++LKDLYINSA+Q+DVSGNRK
Sbjct: 1   MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQ-ELKSDLKDLYINSAVQVDVSGNRK 59

Query: 264 AVVIHVPYRLRKAFRKIHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTL 443
           AVVIHVPYRLRK FRKIHV+LVRELEKKFSGKDVIL+ATRRILRPPKKGSA QRPRSRTL
Sbjct: 60  AVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAAQRPRSRTL 119

Query: 444 TAVHDAVLEDVVYPAEIVGKRIKYRLDGSKIMKVFLDPKERNNTEYKLETFAGVYRKLSG 623
           TAVH+A+LEDVV PAEIVGKR+++R+DGSKIMKV+LDPKERNNTEYKLETFA VYRKLSG
Sbjct: 120 TAVHEAMLEDVVLPAEIVGKRVRFRIDGSKIMKVYLDPKERNNTEYKLETFAAVYRKLSG 179

Query: 624 KDVVFEYPVIEA 659
           KDVVFEYPV EA
Sbjct: 180 KDVVFEYPVSEA 191


>gb|ACU13510.1| unknown [Glycine max]
          Length = 190

 Score =  323 bits (828), Expect = 3e-86
 Identities = 160/191 (83%), Positives = 179/191 (93%)
 Frame = +3

Query: 84  MFTGRRKIQKDKDADLSEFEETVAQSFFDLENTNAGELKTELKDLYINSALQIDVSGNRK 263
           M+T R+KI KDKDA+ +EFEE+V Q+ FDLENTN  ELK++LKDLYINSA+QIDVSGNRK
Sbjct: 1   MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTN-NELKSDLKDLYINSAVQIDVSGNRK 59

Query: 264 AVVIHVPYRLRKAFRKIHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTL 443
           AVVIHVPYRLRK FRKIHV+LVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPR+RTL
Sbjct: 60  AVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRTRTL 119

Query: 444 TAVHDAVLEDVVYPAEIVGKRIKYRLDGSKIMKVFLDPKERNNTEYKLETFAGVYRKLSG 623
           TAVH+A+LED+V PAEIVGKR++Y++DGSKIMKVFLDPKERNNTEYKLETFA VYRKLSG
Sbjct: 120 TAVHEAMLEDIVLPAEIVGKRVRYKIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSG 179

Query: 624 KDVVFEYPVIE 656
           KD+VFEYP  E
Sbjct: 180 KDIVFEYPTTE 190


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