BLASTX nr result

ID: Coptis24_contig00000243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000243
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|2...   633   e-179
dbj|BAG09236.2| UDP-glucose 4-epimerase [Pisum sativum]               632   e-178
ref|XP_002283103.1| PREDICTED: UDP-glucose 4-epimerase [Vitis vi...   631   e-178
sp|Q43070.1|GALE1_PEA RecName: Full=UDP-glucose 4-epimerase; Alt...   629   e-178
ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Ar...   628   e-177

>ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|222841910|gb|EEE79457.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  633 bits (1633), Expect = e-179
 Identities = 306/343 (89%), Positives = 325/343 (94%)
 Frame = -2

Query: 1349 ILVTGGAGFIGTHTVVQLLNEGFGVTVIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 1170
            ILVTGGAGFIGTHTVVQLL EGF V++IDN DNSV EAV RV+ +VG QLSK L+F+LGD
Sbjct: 6    ILVTGGAGFIGTHTVVQLLKEGFKVSIIDNLDNSVTEAVDRVKEVVGPQLSKNLEFNLGD 65

Query: 1169 LRNKDDLEKLFSKNKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYGCKK 990
            LRNKDDLEKLFS+ KFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKY CKK
Sbjct: 66   LRNKDDLEKLFSRTKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYNCKK 125

Query: 989  MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 810
            MVFSSSATVYGQPEKIPCVEDF+L AMNPYGRTKLFLEEIARDIQKAEP+W IILLRYFN
Sbjct: 126  MVFSSSATVYGQPEKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPEWSIILLRYFN 185

Query: 809  PVGAHESGKLGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 630
            PVGAHESGKLGEDPKGIPNNLMPYIQQVAV RLPELNVYGHDYPTKDGSAVRDYIHVMDL
Sbjct: 186  PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGSAVRDYIHVMDL 245

Query: 629  ADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKLCPRRPGDAT 450
            ADGH+AALRK+ T+++IGC AYNLGTG GTSVLEMV AFEKASGKKIP+KLCPRRPGDAT
Sbjct: 246  ADGHVAALRKISTSKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIPVKLCPRRPGDAT 305

Query: 449  AVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 321
            AVYASTEKAE+ELGWKAKYG+EEMCRDQWKWAS NP+GY+SKP
Sbjct: 306  AVYASTEKAERELGWKAKYGVEEMCRDQWKWASNNPWGYQSKP 348


>dbj|BAG09236.2| UDP-glucose 4-epimerase [Pisum sativum]
          Length = 350

 Score =  632 bits (1629), Expect = e-178
 Identities = 304/343 (88%), Positives = 322/343 (93%)
 Frame = -2

Query: 1349 ILVTGGAGFIGTHTVVQLLNEGFGVTVIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 1170
            ILVTGGAGFIGTHTVVQLLN GF V++IDNFDNSV EAV RVR +VG  LS+ L+F LGD
Sbjct: 8    ILVTGGAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGD 67

Query: 1169 LRNKDDLEKLFSKNKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYGCKK 990
            LRNKDDLEKLFSK+KFDAVIHFAGLKAVGESV NPRRYFDNNLVGTINLYEVMAK+ CKK
Sbjct: 68   LRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKK 127

Query: 989  MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 810
            MVFSSSATVYGQPEKIPCVEDF L+AMNPYGRTKLFLEEIARDIQKAEP+WRI+LLRYFN
Sbjct: 128  MVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRYFN 187

Query: 809  PVGAHESGKLGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 630
            PVGAHESGKLGEDP+GIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSA+RDYIHVMDL
Sbjct: 188  PVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDL 247

Query: 629  ADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKLCPRRPGDAT 450
            ADGHIAALRKLFT+ENIGCTAYNLGTGRG+SVLEMVAAFEKASGKKI +KLCPRRPGDAT
Sbjct: 248  ADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPRRPGDAT 307

Query: 449  AVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 321
             VYAST KAEKELGWKAKYG+EEMCRDQW WA  NP+GY  KP
Sbjct: 308  EVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGKP 350


>ref|XP_002283103.1| PREDICTED: UDP-glucose 4-epimerase [Vitis vinifera]
            gi|297742582|emb|CBI34731.3| unnamed protein product
            [Vitis vinifera]
          Length = 350

 Score =  631 bits (1628), Expect = e-178
 Identities = 306/343 (89%), Positives = 324/343 (94%)
 Frame = -2

Query: 1349 ILVTGGAGFIGTHTVVQLLNEGFGVTVIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 1170
            ILVTGGAGFIGTHTVVQLL+EGF V +IDN DNSV EA+ RVR LVG +LS+KL F+LGD
Sbjct: 8    ILVTGGAGFIGTHTVVQLLSEGFTVWIIDNLDNSVLEAIERVRDLVGAELSRKLHFNLGD 67

Query: 1169 LRNKDDLEKLFSKNKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYGCKK 990
            LRNK DLEKLFS+ KFDAVIHFAGLKAVGESV NPRRYFDNNL+GTINLYE+MAKY CKK
Sbjct: 68   LRNKADLEKLFSQTKFDAVIHFAGLKAVGESVVNPRRYFDNNLIGTINLYEIMAKYNCKK 127

Query: 989  MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 810
            MVFSSSATVYGQP+KIPCVEDF+L AMNPYGRTKLFLEEIARDIQKAEPDW+IILLRYFN
Sbjct: 128  MVFSSSATVYGQPDKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPDWKIILLRYFN 187

Query: 809  PVGAHESGKLGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 630
            PVGAHESGKLGEDPKGIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSA+RDYIHVMDL
Sbjct: 188  PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDL 247

Query: 629  ADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKLCPRRPGDAT 450
            ADGHIAALRKLFT+E+IGCTAYNLGTG+GTSVLEMVAAFEKASGKKIPIKLCPRR GDAT
Sbjct: 248  ADGHIAALRKLFTSEDIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRAGDAT 307

Query: 449  AVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 321
            AVYASTEKA KELGWKAKYGI EMCRDQWKWAS NP+GY SKP
Sbjct: 308  AVYASTEKAAKELGWKAKYGIAEMCRDQWKWASNNPWGYHSKP 350


>sp|Q43070.1|GALE1_PEA RecName: Full=UDP-glucose 4-epimerase; AltName:
            Full=Galactowaldenase; AltName: Full=UDP-galactose
            4-epimerase gi|1173555|gb|AAA86532.1|
            UDP-galactose-4-epimerase [Pisum sativum]
          Length = 350

 Score =  629 bits (1623), Expect = e-178
 Identities = 303/343 (88%), Positives = 321/343 (93%)
 Frame = -2

Query: 1349 ILVTGGAGFIGTHTVVQLLNEGFGVTVIDNFDNSVEEAVVRVRGLVGDQLSKKLDFHLGD 1170
            ILVTG AGFIGTHTVVQLLN GF V++IDNFDNSV EAV RVR +VG  LS+ L+F LGD
Sbjct: 8    ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGD 67

Query: 1169 LRNKDDLEKLFSKNKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYGCKK 990
            LRNKDDLEKLFSK+KFDAVIHFAGLKAVGESV NPRRYFDNNLVGTINLYEVMAK+ CKK
Sbjct: 68   LRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKK 127

Query: 989  MVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLRYFN 810
            MVFSSSATVYGQPEKIPCVEDF L+AMNPYGRTKLFLEEIARDIQKAEP+WRI+LLRYFN
Sbjct: 128  MVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRYFN 187

Query: 809  PVGAHESGKLGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHVMDL 630
            PVGAHESGKLGEDP+GIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSA+RDYIHVMDL
Sbjct: 188  PVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDL 247

Query: 629  ADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKLCPRRPGDAT 450
            ADGHIAALRKLFT+ENIGCTAYNLGTGRG+SVLEMVAAFEKASGKKI +KLCPRRPGDAT
Sbjct: 248  ADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPRRPGDAT 307

Query: 449  AVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESKP 321
             VYAST KAEKELGWKAKYG+EEMCRDQW WA  NP+GY  KP
Sbjct: 308  EVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGKP 350


>ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis thaliana]
            gi|12643760|sp|Q42605.2|GALE1_ARATH RecName:
            Full=UDP-glucose 4-epimerase 1; AltName:
            Full=Galactowaldenase 1; AltName: Full=UDP-galactose
            4-epimerase 1 gi|8698725|gb|AAF78483.1|AC012187_3 Strong
            similarity to UDPglucose 4-epimerase from Arabidopsis
            thaliana gi|2129759 and is a member of the NAD dependent
            Epimerase/Dehydratase PF|01370 family. ESTs gb|AI100184,
            gb|T22969, gb|T22968, gb|H76416, gb|AI998807 come from
            this gene [Arabidopsis thaliana]
            gi|12248021|gb|AAG50102.1|AF334724_1 putative uridine
            diphosphate glucose epimerase [Arabidopsis thaliana]
            gi|15809880|gb|AAL06868.1| At1g12780/F13K23_21
            [Arabidopsis thaliana] gi|21539429|gb|AAM53267.1| uridine
            diphosphate glucose epimerase [Arabidopsis thaliana]
            gi|23197648|gb|AAN15351.1| uridine diphosphate glucose
            epimerase [Arabidopsis thaliana]
            gi|332190807|gb|AEE28928.1| UDP-D-glucose/UDP-D-galactose
            4-epimerase 1 [Arabidopsis thaliana]
          Length = 351

 Score =  628 bits (1619), Expect = e-177
 Identities = 304/345 (88%), Positives = 322/345 (93%)
 Frame = -2

Query: 1358 KNNILVTGGAGFIGTHTVVQLLNEGFGVTVIDNFDNSVEEAVVRVRGLVGDQLSKKLDFH 1179
            + NILVTGGAGFIGTHTVVQLL +GF V++IDNFDNSV EAV RVR LVG  LSKKLDF+
Sbjct: 6    EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFN 65

Query: 1178 LGDLRNKDDLEKLFSKNKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYG 999
            LGDLRNK D+EKLFSK +FDAVIHFAGLKAVGESV NPRRYFDNNLVGTINLYE MAKY 
Sbjct: 66   LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYN 125

Query: 998  CKKMVFSSSATVYGQPEKIPCVEDFSLKAMNPYGRTKLFLEEIARDIQKAEPDWRIILLR 819
            CK MVFSSSATVYGQPEKIPC+EDF LKAMNPYGRTKLFLEEIARDIQKAEP+WRIILLR
Sbjct: 126  CKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185

Query: 818  YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVDRLPELNVYGHDYPTKDGSAVRDYIHV 639
            YFNPVGAHESG +GEDPKGIPNNLMPYIQQVAV RLPELNVYGHDYPT+DGSAVRDYIHV
Sbjct: 186  YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245

Query: 638  MDLADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKLCPRRPG 459
            MDLADGHIAALRKLF    IGCTAYNLGTG+GTSVLEMVAAFEKASGKKIPIKLCPRR G
Sbjct: 246  MDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSG 305

Query: 458  DATAVYASTEKAEKELGWKAKYGIEEMCRDQWKWASTNPYGYESK 324
            DATAVYASTEKAEKELGWKAKYG++EMCRDQWKWA+ NP+GY++K
Sbjct: 306  DATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350


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