BLASTX nr result

ID: Coptis24_contig00000241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000241
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872048.1| hypothetical protein ARALYDRAFT_489189 [Arab...   127   4e-27
ref|XP_003536737.1| PREDICTED: transcription factor TCP7-like [G...   122   7e-26
ref|XP_002268058.1| PREDICTED: transcription factor TCP7-like [V...   118   2e-24
ref|XP_004143620.1| PREDICTED: transcription factor TCP7-like [C...   117   3e-24
ref|NP_001234581.1| TCP transcription factor 14 [Solanum lycoper...   117   4e-24

>ref|XP_002872048.1| hypothetical protein ARALYDRAFT_489189 [Arabidopsis lyrata subsp.
           lyrata] gi|297317885|gb|EFH48307.1| hypothetical protein
           ARALYDRAFT_489189 [Arabidopsis lyrata subsp. lyrata]
          Length = 243

 Score =  127 bits (318), Expect = 4e-27
 Identities = 76/139 (54%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
 Frame = +3

Query: 204 NMSTEGV---SNGMEQQQTNTNGVKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQEL 374
           N + +GV   SNG   +Q ++  VKKPP+KDRHSKVDGR  RIRMPIICAARVFQLT+EL
Sbjct: 6   NNNNDGVMISSNGALIEQPSSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTREL 65

Query: 375 GHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXXFSAVSLFVRISSTPSLSASLVHKPSPHN 554
           GHKSDGQ IEWLLRQAE               FS  S+ +R +S+ SLS+SL HKP+   
Sbjct: 66  GHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGTSSTSLSSSLDHKPT--- 122

Query: 555 HNLNNTSKKDILIARSKAD 611
            +L   S   IL  R +AD
Sbjct: 123 -SLLGGSSPFILGKRVRAD 140


>ref|XP_003536737.1| PREDICTED: transcription factor TCP7-like [Glycine max]
          Length = 246

 Score =  122 bits (307), Expect = 7e-26
 Identities = 70/115 (60%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
 Frame = +3

Query: 210 STEGVSNG--MEQQQTNTNGVKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQELGHK 383
           +T GVSNG  ++ Q+     VKKPPSKDRHSKVDGR  RIRMPIICAARVFQLT+ELGHK
Sbjct: 7   TTNGVSNGAIIDAQRQQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 66

Query: 384 SDGQAIEWLLRQAEXXXXXXXXXXXXXXXFSAVSLFVR--ISSTPSLSASLVHKP 542
           SDGQ IEWLLRQAE               FS+VSL VR   +S  S S++  HKP
Sbjct: 67  SDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVRAAANSLSSPSSTSDHKP 121


>ref|XP_002268058.1| PREDICTED: transcription factor TCP7-like [Vitis vinifera]
          Length = 255

 Score =  118 bits (295), Expect = 2e-24
 Identities = 70/119 (58%), Positives = 80/119 (67%), Gaps = 7/119 (5%)
 Frame = +3

Query: 210 STEGVSNGM----EQQQTNTNG---VKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQ 368
           +  GV+NG     ++QQ   NG   VKKPP+KDRHSKVDGR  RIRMPIICAARVFQLT+
Sbjct: 7   AANGVTNGAIVDSQRQQQPGNGALAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTR 66

Query: 369 ELGHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXXFSAVSLFVRISSTPSLSASLVHKPS 545
           ELGHKSDGQ IEWLLRQAE               FS+VS+ VR   + S SA+L  KPS
Sbjct: 67  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGGSTS-SAALDQKPS 124


>ref|XP_004143620.1| PREDICTED: transcription factor TCP7-like [Cucumis sativus]
           gi|449528835|ref|XP_004171408.1| PREDICTED:
           transcription factor TCP7-like [Cucumis sativus]
          Length = 256

 Score =  117 bits (293), Expect = 3e-24
 Identities = 68/112 (60%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
 Frame = +3

Query: 213 TEGVSNGM----EQQQTNTNG---VKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQE 371
           T GVSNG      +  +++NG   VKKPPSKDRHSKVDGR  RIRMPIICAARVFQLT+E
Sbjct: 7   TNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRE 66

Query: 372 LGHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXXFSAVSLFVRISSTPSLSAS 527
           LGHKSDGQ IEWLLRQAE               FS+VSL VR +   S S S
Sbjct: 67  LGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 118


>ref|NP_001234581.1| TCP transcription factor 14 [Solanum lycopersicum]
           gi|306416839|gb|ADM87263.1| TCP transcription factor 14
           [Solanum lycopersicum]
          Length = 266

 Score =  117 bits (292), Expect = 4e-24
 Identities = 80/165 (48%), Positives = 91/165 (55%), Gaps = 31/165 (18%)
 Frame = +3

Query: 207 MSTEGVSNGM------EQQQT----NTNG---VKKPPSKDRHSKVDGRRWRIRMPIICAA 347
           MST    NG       +QQQ      TNG   VKKPP KDRHSKVDGR  RIRMPI+CAA
Sbjct: 1   MSTSAEGNGAIIDPQRQQQQAPTGVGTNGALTVKKPPVKDRHSKVDGRGRRIRMPIVCAA 60

Query: 348 RVFQLTQELGHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXXFSAVSLFVRISS---TPSL 518
           RVFQLT+ELGHKSDGQ IEWLLRQAE               FS VS+ VR S+     SL
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTIPASFSTVSVSVRNSTASLVSSL 120

Query: 519 SASLVHK------PSP---------HNHNLNNTSKKDILIARSKA 608
           SA L  K      P+P          + N+ N +K D+ +A   A
Sbjct: 121 SAPLDQKSSQMISPAPFILGKRLRSDDENIENGNKDDVAVAAGGA 165


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