BLASTX nr result

ID: Coptis24_contig00000233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000233
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613219.1| ADP-ribosylation factor [Medicago truncatula...   366   4e-99
ref|NP_001236384.1| uncharacterized protein LOC100306021 [Glycin...   366   4e-99
dbj|BAB90396.1| ADP-ribosylation factor [Oryza sativa Japonica G...   366   5e-99
gb|AEQ94161.1| ADP-ribosylation factor [Elaeis guineensis]            366   5e-99
gb|ADH44695.1| ADP-ribosylation factor [Salvia miltiorrhiza]          366   5e-99

>ref|XP_003613219.1| ADP-ribosylation factor [Medicago truncatula]
           gi|355514554|gb|AES96177.1| ADP-ribosylation factor
           [Medicago truncatula]
          Length = 454

 Score =  366 bits (940), Expect = 4e-99
 Identities = 181/181 (100%), Positives = 181/181 (100%)
 Frame = +1

Query: 70  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 249
           MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 274 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 333

Query: 250 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 429
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 334 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 393

Query: 430 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 609
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK
Sbjct: 394 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 453

Query: 610 A 612
           A
Sbjct: 454 A 454



 Score =  365 bits (936), Expect = 1e-98
 Identities = 180/180 (100%), Positives = 180/180 (100%)
 Frame = +1

Query: 70  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 249
           MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 250 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 429
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 430 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 609
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180


>ref|NP_001236384.1| uncharacterized protein LOC100306021 [Glycine max]
           gi|356497724|ref|XP_003517709.1| PREDICTED:
           ADP-ribosylation factor 2-like [Glycine max]
           gi|356502055|ref|XP_003519837.1| PREDICTED:
           ADP-ribosylation factor 2-like isoform 1 [Glycine max]
           gi|356502057|ref|XP_003519838.1| PREDICTED:
           ADP-ribosylation factor 2-like isoform 2 [Glycine max]
           gi|356577891|ref|XP_003557055.1| PREDICTED:
           ADP-ribosylation factor 2-like [Glycine max]
           gi|449434941|ref|XP_004135254.1| PREDICTED:
           ADP-ribosylation factor 2-like isoform 2 [Cucumis
           sativus] gi|449517567|ref|XP_004165817.1| PREDICTED:
           ADP-ribosylation factor 2-like isoform 2 [Cucumis
           sativus] gi|217074208|gb|ACJ85464.1| unknown [Medicago
           truncatula] gi|224284028|gb|ACN39752.1| unknown [Picea
           sitchensis] gi|224284100|gb|ACN39787.1| unknown [Picea
           sitchensis] gi|224286854|gb|ACN41130.1| unknown [Picea
           sitchensis] gi|255627305|gb|ACU13997.1| unknown [Glycine
           max] gi|255645449|gb|ACU23220.1| unknown [Glycine max]
           gi|388493526|gb|AFK34829.1| unknown [Medicago
           truncatula] gi|388511481|gb|AFK43802.1| unknown [Lotus
           japonicus] gi|388512615|gb|AFK44369.1| unknown [Lotus
           japonicus] gi|388517053|gb|AFK46588.1| unknown [Medicago
           truncatula]
          Length = 181

 Score =  366 bits (940), Expect = 4e-99
 Identities = 181/181 (100%), Positives = 181/181 (100%)
 Frame = +1

Query: 70  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 249
           MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 250 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 429
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 430 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 609
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 610 A 612
           A
Sbjct: 181 A 181


>dbj|BAB90396.1| ADP-ribosylation factor [Oryza sativa Japonica Group]
          Length = 376

 Score =  366 bits (939), Expect = 5e-99
 Identities = 180/185 (97%), Positives = 182/185 (98%)
 Frame = +1

Query: 70  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 249
           MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 179 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 238

Query: 250 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 429
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAV
Sbjct: 239 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 298

Query: 430 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 609
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 299 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 358

Query: 610 A*GKW 624
             G W
Sbjct: 359 RFGSW 363


>gb|AEQ94161.1| ADP-ribosylation factor [Elaeis guineensis]
          Length = 181

 Score =  366 bits (939), Expect = 5e-99
 Identities = 180/181 (99%), Positives = 181/181 (100%)
 Frame = +1

Query: 70  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 249
           MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 250 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 429
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+VEARDELHRMLNEDELRDAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAV 120

Query: 430 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 609
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 610 A 612
           A
Sbjct: 181 A 181


>gb|ADH44695.1| ADP-ribosylation factor [Salvia miltiorrhiza]
          Length = 181

 Score =  366 bits (939), Expect = 5e-99
 Identities = 180/181 (99%), Positives = 181/181 (100%)
 Frame = +1

Query: 70  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 249
           MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 250 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 429
           ISFTVWDVGGQDK+RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 61  ISFTVWDVGGQDKVRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 430 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 609
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 610 A 612
           A
Sbjct: 181 A 181


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