BLASTX nr result

ID: Coptis24_contig00000225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000225
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK82275.1| PR-4 protein [Chimonanthus praecox]                    241   1e-61
ref|XP_002884463.1| PR4-type protein [Arabidopsis lyrata subsp. ...   238   1e-60
ref|XP_002319077.1| predicted protein [Populus trichocarpa] gi|1...   238   1e-60
ref|XP_002328493.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
ref|XP_002319078.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59

>gb|AFK82275.1| PR-4 protein [Chimonanthus praecox]
          Length = 142

 Score =  241 bits (615), Expect = 1e-61
 Identities = 113/142 (79%), Positives = 120/142 (84%)
 Frame = -1

Query: 667 MGNTSLYMVFLLCLIGGAVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAW 488
           MGN  + MVFLLCL   A AQSASNVRATYHIYNP Q GWD N  S +CATWDANKPLAW
Sbjct: 1   MGNLGVSMVFLLCLAAYAEAQSASNVRATYHIYNPQQIGWDYNTASVFCATWDANKPLAW 60

Query: 487 RQQYGWTAFCGPVGPRGQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLD 308
           R +YGWTAFCG VGPRGQASCG+CLRVTNT TG+Q TVRIVDQCSNGGLDLEEGVFR+LD
Sbjct: 61  RSKYGWTAFCGLVGPRGQASCGKCLRVTNTGTGSQATVRIVDQCSNGGLDLEEGVFRQLD 120

Query: 307 TNGRGNAQGHLIVNYQFVNC*D 242
           TNG G  QGHLIVNY FV+C D
Sbjct: 121 TNGAGIQQGHLIVNYDFVDCGD 142


>ref|XP_002884463.1| PR4-type protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330303|gb|EFH60722.1| PR4-type protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 141

 Score =  238 bits (607), Expect = 1e-60
 Identities = 110/141 (78%), Positives = 120/141 (85%), Gaps = 1/141 (0%)
 Frame = -1

Query: 667 MGNTSLYMVFLLCLIGG-AVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLA 491
           M   SL +  LLC     A AQSA NVRATYHIYNPAQN WDL RVSAYC+TWD N+PL 
Sbjct: 1   MSRLSLCVFVLLCAFAAKAAAQSAPNVRATYHIYNPAQNNWDLYRVSAYCSTWDGNQPLE 60

Query: 490 WRQQYGWTAFCGPVGPRGQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRL 311
           WRQ+YGWTAFCGPVGPRG+ SCGRCLRVTNT TG Q TVRIVDQCSNGGLDL+EGVFR+L
Sbjct: 61  WRQRYGWTAFCGPVGPRGRDSCGRCLRVTNTATGTQATVRIVDQCSNGGLDLDEGVFRQL 120

Query: 310 DTNGRGNAQGHLIVNYQFVNC 248
           DTNG+GNA+GHLIVNY+FVNC
Sbjct: 121 DTNGQGNARGHLIVNYEFVNC 141


>ref|XP_002319077.1| predicted protein [Populus trichocarpa] gi|118487978|gb|ABK95810.1|
           unknown [Populus trichocarpa]
           gi|222857453|gb|EEE95000.1| predicted protein [Populus
           trichocarpa]
          Length = 196

 Score =  238 bits (607), Expect = 1e-60
 Identities = 107/126 (84%), Positives = 116/126 (92%)
 Frame = -1

Query: 619 GAVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAFCGPVGPR 440
           G   +SASNVRATYH YNP QNGWDLN VSAYC+TWDANKPLAWR++YGWTAFCGPVGPR
Sbjct: 71  GGGGESASNVRATYHYYNPDQNGWDLNAVSAYCSTWDANKPLAWRRKYGWTAFCGPVGPR 130

Query: 439 GQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLDTNGRGNAQGHLIVNYQ 260
           GQASCG+CLRVTNT TGAQ TVRIVDQCSNGGLDL+ GVFR++DT+GRGNAQGHLIVNYQ
Sbjct: 131 GQASCGKCLRVTNTGTGAQVTVRIVDQCSNGGLDLDAGVFRQIDTDGRGNAQGHLIVNYQ 190

Query: 259 FVNC*D 242
           FVNC D
Sbjct: 191 FVNCGD 196


>ref|XP_002328493.1| predicted protein [Populus trichocarpa] gi|222838208|gb|EEE76573.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  237 bits (605), Expect = 2e-60
 Identities = 106/120 (88%), Positives = 113/120 (94%)
 Frame = -1

Query: 607 QSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAFCGPVGPRGQAS 428
           +SASNVRATYH YNP QNGWDLN V AYC+TWDANKPLAWR+QYGWTAFCGPVGPRGQAS
Sbjct: 76  ESASNVRATYHFYNPEQNGWDLNAVRAYCSTWDANKPLAWRRQYGWTAFCGPVGPRGQAS 135

Query: 427 CGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLDTNGRGNAQGHLIVNYQFVNC 248
           CGRCLRVTNT TGAQ T+RIVDQCSNGGLDL+ GVFR+LDT+GRGNAQGHLIVNYQFVNC
Sbjct: 136 CGRCLRVTNTGTGAQATMRIVDQCSNGGLDLDAGVFRQLDTDGRGNAQGHLIVNYQFVNC 195


>ref|XP_002319078.1| predicted protein [Populus trichocarpa] gi|222857454|gb|EEE95001.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  233 bits (595), Expect = 3e-59
 Identities = 105/130 (80%), Positives = 115/130 (88%)
 Frame = -1

Query: 631 CLIGGAVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAFCGP 452
           C  G    +SASNVRATYH YNP QNGWDLN VSAYC+TWDANKPL WR++YGWTAFCGP
Sbjct: 61  CSPGTGAGESASNVRATYHYYNPDQNGWDLNAVSAYCSTWDANKPLEWRRKYGWTAFCGP 120

Query: 451 VGPRGQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLDTNGRGNAQGHLI 272
           VGP GQASCGRCLRVTNT TGAQ TVRIVDQCSNGGLDL+ GVF+++DT+GRGNAQGHLI
Sbjct: 121 VGPSGQASCGRCLRVTNTGTGAQATVRIVDQCSNGGLDLDAGVFQQIDTDGRGNAQGHLI 180

Query: 271 VNYQFVNC*D 242
           VNYQFV+C D
Sbjct: 181 VNYQFVDCGD 190


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