BLASTX nr result
ID: Coptis24_contig00000225
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000225 (787 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK82275.1| PR-4 protein [Chimonanthus praecox] 241 1e-61 ref|XP_002884463.1| PR4-type protein [Arabidopsis lyrata subsp. ... 238 1e-60 ref|XP_002319077.1| predicted protein [Populus trichocarpa] gi|1... 238 1e-60 ref|XP_002328493.1| predicted protein [Populus trichocarpa] gi|2... 237 2e-60 ref|XP_002319078.1| predicted protein [Populus trichocarpa] gi|2... 233 3e-59 >gb|AFK82275.1| PR-4 protein [Chimonanthus praecox] Length = 142 Score = 241 bits (615), Expect = 1e-61 Identities = 113/142 (79%), Positives = 120/142 (84%) Frame = -1 Query: 667 MGNTSLYMVFLLCLIGGAVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAW 488 MGN + MVFLLCL A AQSASNVRATYHIYNP Q GWD N S +CATWDANKPLAW Sbjct: 1 MGNLGVSMVFLLCLAAYAEAQSASNVRATYHIYNPQQIGWDYNTASVFCATWDANKPLAW 60 Query: 487 RQQYGWTAFCGPVGPRGQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLD 308 R +YGWTAFCG VGPRGQASCG+CLRVTNT TG+Q TVRIVDQCSNGGLDLEEGVFR+LD Sbjct: 61 RSKYGWTAFCGLVGPRGQASCGKCLRVTNTGTGSQATVRIVDQCSNGGLDLEEGVFRQLD 120 Query: 307 TNGRGNAQGHLIVNYQFVNC*D 242 TNG G QGHLIVNY FV+C D Sbjct: 121 TNGAGIQQGHLIVNYDFVDCGD 142 >ref|XP_002884463.1| PR4-type protein [Arabidopsis lyrata subsp. lyrata] gi|297330303|gb|EFH60722.1| PR4-type protein [Arabidopsis lyrata subsp. lyrata] Length = 141 Score = 238 bits (607), Expect = 1e-60 Identities = 110/141 (78%), Positives = 120/141 (85%), Gaps = 1/141 (0%) Frame = -1 Query: 667 MGNTSLYMVFLLCLIGG-AVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLA 491 M SL + LLC A AQSA NVRATYHIYNPAQN WDL RVSAYC+TWD N+PL Sbjct: 1 MSRLSLCVFVLLCAFAAKAAAQSAPNVRATYHIYNPAQNNWDLYRVSAYCSTWDGNQPLE 60 Query: 490 WRQQYGWTAFCGPVGPRGQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRL 311 WRQ+YGWTAFCGPVGPRG+ SCGRCLRVTNT TG Q TVRIVDQCSNGGLDL+EGVFR+L Sbjct: 61 WRQRYGWTAFCGPVGPRGRDSCGRCLRVTNTATGTQATVRIVDQCSNGGLDLDEGVFRQL 120 Query: 310 DTNGRGNAQGHLIVNYQFVNC 248 DTNG+GNA+GHLIVNY+FVNC Sbjct: 121 DTNGQGNARGHLIVNYEFVNC 141 >ref|XP_002319077.1| predicted protein [Populus trichocarpa] gi|118487978|gb|ABK95810.1| unknown [Populus trichocarpa] gi|222857453|gb|EEE95000.1| predicted protein [Populus trichocarpa] Length = 196 Score = 238 bits (607), Expect = 1e-60 Identities = 107/126 (84%), Positives = 116/126 (92%) Frame = -1 Query: 619 GAVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAFCGPVGPR 440 G +SASNVRATYH YNP QNGWDLN VSAYC+TWDANKPLAWR++YGWTAFCGPVGPR Sbjct: 71 GGGGESASNVRATYHYYNPDQNGWDLNAVSAYCSTWDANKPLAWRRKYGWTAFCGPVGPR 130 Query: 439 GQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLDTNGRGNAQGHLIVNYQ 260 GQASCG+CLRVTNT TGAQ TVRIVDQCSNGGLDL+ GVFR++DT+GRGNAQGHLIVNYQ Sbjct: 131 GQASCGKCLRVTNTGTGAQVTVRIVDQCSNGGLDLDAGVFRQIDTDGRGNAQGHLIVNYQ 190 Query: 259 FVNC*D 242 FVNC D Sbjct: 191 FVNCGD 196 >ref|XP_002328493.1| predicted protein [Populus trichocarpa] gi|222838208|gb|EEE76573.1| predicted protein [Populus trichocarpa] Length = 195 Score = 237 bits (605), Expect = 2e-60 Identities = 106/120 (88%), Positives = 113/120 (94%) Frame = -1 Query: 607 QSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAFCGPVGPRGQAS 428 +SASNVRATYH YNP QNGWDLN V AYC+TWDANKPLAWR+QYGWTAFCGPVGPRGQAS Sbjct: 76 ESASNVRATYHFYNPEQNGWDLNAVRAYCSTWDANKPLAWRRQYGWTAFCGPVGPRGQAS 135 Query: 427 CGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLDTNGRGNAQGHLIVNYQFVNC 248 CGRCLRVTNT TGAQ T+RIVDQCSNGGLDL+ GVFR+LDT+GRGNAQGHLIVNYQFVNC Sbjct: 136 CGRCLRVTNTGTGAQATMRIVDQCSNGGLDLDAGVFRQLDTDGRGNAQGHLIVNYQFVNC 195 >ref|XP_002319078.1| predicted protein [Populus trichocarpa] gi|222857454|gb|EEE95001.1| predicted protein [Populus trichocarpa] Length = 190 Score = 233 bits (595), Expect = 3e-59 Identities = 105/130 (80%), Positives = 115/130 (88%) Frame = -1 Query: 631 CLIGGAVAQSASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAFCGP 452 C G +SASNVRATYH YNP QNGWDLN VSAYC+TWDANKPL WR++YGWTAFCGP Sbjct: 61 CSPGTGAGESASNVRATYHYYNPDQNGWDLNAVSAYCSTWDANKPLEWRRKYGWTAFCGP 120 Query: 451 VGPRGQASCGRCLRVTNTYTGAQTTVRIVDQCSNGGLDLEEGVFRRLDTNGRGNAQGHLI 272 VGP GQASCGRCLRVTNT TGAQ TVRIVDQCSNGGLDL+ GVF+++DT+GRGNAQGHLI Sbjct: 121 VGPSGQASCGRCLRVTNTGTGAQATVRIVDQCSNGGLDLDAGVFQQIDTDGRGNAQGHLI 180 Query: 271 VNYQFVNC*D 242 VNYQFV+C D Sbjct: 181 VNYQFVDCGD 190