BLASTX nr result

ID: Coptis24_contig00000214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000214
         (2690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25055.3| unnamed protein product [Vitis vinifera]              246   3e-62
ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251...   246   3e-62
ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-58
ref|XP_002520955.1| cyclophilin, putative [Ricinus communis] gi|...   231   8e-58
emb|CAN75764.1| hypothetical protein VITISV_034442 [Vitis vinifera]   231   8e-58

>emb|CBI25055.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  246 bits (627), Expect = 3e-62
 Identities = 132/210 (62%), Positives = 149/210 (70%)
 Frame = -1

Query: 2522 MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 2343
            M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G+ T K LH+K
Sbjct: 1    MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 2342 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 2163
            GS FHRIIKGFM QGGDFSK +GTGGESI+GG+FADENFK +H   G LSMAN+G +TNG
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 2162 SQFFITLKATPHLDXXXXXXXXXXXGMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 1983
            SQFF+T K  PHLD           G+DT+ +IE Q G+ DGKP  LVKIVDCGE SE K
Sbjct: 121  SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIE-QLGTGDGKPARLVKIVDCGETSENK 179

Query: 1982 FNXXXXXXXXXXXXXXXXXASFSDDSSDEK 1893
             +                 +  SDDSSDE+
Sbjct: 180  IHGAVGTEKGRKKKSGKALS--SDDSSDEQ 207



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 67/218 (30%), Positives = 90/218 (41%), Gaps = 6/218 (2%)
 Frame = -1

Query: 1580 TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDQ----- 1416
            T S  S SDD+ A    SA     NS H E          KHP     +   ++Q     
Sbjct: 320  TSSSRSSSDDEKASHHVSAHKTS-NSTHTE---------SKHPRNLGKKTGALEQDTITK 369

Query: 1415 -QKKDGLKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKSDKIANKYPDSDNEXXXXXXXX 1239
             QK   LK+++DDSSHEEGEF+Q K + LNNGH TE KS+K A ++P SD+         
Sbjct: 370  PQKDHELKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTP 428

Query: 1238 XXXXRYQXXXXXXXXXXXXXXXXXXXXXXXXXXPAGRYNRQTNXXXXXXXXXXXXXXXXX 1059
                R +                             R + + N                 
Sbjct: 429  SPRRRAKISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATE 488

Query: 1058 XPVAXXXXXXXXXXSPDGNPKRIRRGRGFTERYASARK 945
             P +          SP+G PKRIR+GRGFT+R++ AR+
Sbjct: 489  PPASNHGRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 526


>ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251093 [Vitis vinifera]
          Length = 702

 Score =  246 bits (627), Expect = 3e-62
 Identities = 132/210 (62%), Positives = 149/210 (70%)
 Frame = -1

Query: 2522 MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 2343
            M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G+ T K LH+K
Sbjct: 1    MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 2342 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 2163
            GS FHRIIKGFM QGGDFSK +GTGGESI+GG+FADENFK +H   G LSMAN+G +TNG
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 2162 SQFFITLKATPHLDXXXXXXXXXXXGMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 1983
            SQFF+T K  PHLD           G+DT+ +IE Q G+ DGKP  LVKIVDCGE SE K
Sbjct: 121  SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIE-QLGTGDGKPARLVKIVDCGETSENK 179

Query: 1982 FNXXXXXXXXXXXXXXXXXASFSDDSSDEK 1893
             +                 +  SDDSSDE+
Sbjct: 180  IHGAVGTEKGRKKKSGKALS--SDDSSDEQ 207



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 65/212 (30%), Positives = 88/212 (41%)
 Frame = -1

Query: 1580 TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDQQKKDG 1401
            T S  S SDD+ A    SA     NS H E K   +    K     + +      QK   
Sbjct: 320  TSSSRSSSDDEKASHHVSAHKTS-NSTHTESKHPRNLDAGKKTGA-LEQDTITKPQKDHE 377

Query: 1400 LKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKSDKIANKYPDSDNEXXXXXXXXXXXXRY 1221
            LK+++DDSSHEEGEF+Q K + LNNGH TE KS+K A ++P SD+             R 
Sbjct: 378  LKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTPSPRRRA 436

Query: 1220 QXXXXXXXXXXXXXXXXXXXXXXXXXXPAGRYNRQTNXXXXXXXXXXXXXXXXXXPVAXX 1041
            +                             R + + N                  P +  
Sbjct: 437  KISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATEPPASNH 496

Query: 1040 XXXXXXXXSPDGNPKRIRRGRGFTERYASARK 945
                    SP+G PKRIR+GRGFT+R++ AR+
Sbjct: 497  GRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 528


>ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|222856251|gb|EEE93798.1|
            predicted protein [Populus trichocarpa]
          Length = 206

 Score =  231 bits (590), Expect = 6e-58
 Identities = 123/180 (68%), Positives = 135/180 (75%)
 Frame = -1

Query: 2522 MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 2343
            M+K KNPLVFLDV IDG   E+I IELF+DVVP+TAENFRALCTGEKGTG  T K LH+K
Sbjct: 1    MSKKKNPLVFLDVSIDGDPAERIFIELFADVVPRTAENFRALCTGEKGTGKTTGKPLHYK 60

Query: 2342 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 2163
            GS FHRIIK FM QGGDFSK +GTGGESI+GG+FADENF L H  AG LSMAN+G +TNG
Sbjct: 61   GSSFHRIIKEFMAQGGDFSKGNGTGGESIYGGKFADENFILRHEGAGHLSMANSGPNTNG 120

Query: 2162 SQFFITLKATPHLDXXXXXXXXXXXGMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 1983
            SQFFITLK   HLD           GMD V +IE Q GS  G+P   VKIVDCGE SE K
Sbjct: 121  SQFFITLKPQAHLDGKHVVFGKVVKGMDIVKKIE-QVGSARGQPARPVKIVDCGETSESK 179


>ref|XP_002520955.1| cyclophilin, putative [Ricinus communis] gi|223539792|gb|EEF41372.1|
            cyclophilin, putative [Ricinus communis]
          Length = 688

 Score =  231 bits (589), Expect = 8e-58
 Identities = 126/210 (60%), Positives = 141/210 (67%)
 Frame = -1

Query: 2522 MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 2343
            M+K KNPLV+ DV IDG   E+IVIELF+DV PKTAENFRALCTGE G G  T K LH+K
Sbjct: 1    MSKKKNPLVYFDVSIDGDPVERIVIELFADVAPKTAENFRALCTGEMGIGKTTGKPLHYK 60

Query: 2342 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 2163
            GS FHRIIKGFM QGGDFSK +GTGGESI+GG+F+DENF L H+ AG LSMAN+G +TNG
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFSDENFILKHDGAGFLSMANSGPNTNG 120

Query: 2162 SQFFITLKATPHLDXXXXXXXXXXXGMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 1983
            SQFFIT K  P LD           G++ V RIE Q G+ DGKP   VKIVDCGE SE K
Sbjct: 121  SQFFITFKRQPQLDRKHVVFGKVIKGIEVVKRIE-QLGTADGKPVHPVKIVDCGETSENK 179

Query: 1982 FNXXXXXXXXXXXXXXXXXASFSDDSSDEK 1893
                                  SD SSDEK
Sbjct: 180  IQ--DTVGKDAGKKKKSGKVPLSDSSSDEK 207


>emb|CAN75764.1| hypothetical protein VITISV_034442 [Vitis vinifera]
          Length = 786

 Score =  231 bits (589), Expect = 8e-58
 Identities = 132/237 (55%), Positives = 149/237 (62%), Gaps = 27/237 (11%)
 Frame = -1

Query: 2522 MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 2343
            M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G+ T K LH+K
Sbjct: 1    MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 2342 GSLFHRIIKGFMVQGGDFSKRDG---------------------------TGGESIWGGR 2244
            GS FHRIIKGFM QGGDFSK +G                           TGGESI+GG+
Sbjct: 61   GSFFHRIIKGFMAQGGDFSKGNGMCFLFPSSIASVDAYSLFDLYLNAQTCTGGESIYGGK 120

Query: 2243 FADENFKLSHNEAGLLSMANAGKHTNGSQFFITLKATPHLDXXXXXXXXXXXGMDTVFRI 2064
            FADENFK +H   G LSMAN+G +TNGSQFF+T K  PHLD           G+DT+ +I
Sbjct: 121  FADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKI 180

Query: 2063 EKQAGSEDGKPCCLVKIVDCGEGSEKKFNXXXXXXXXXXXXXXXXXASFSDDSSDEK 1893
            E Q G+ DGKP  LVKIVDCGE SE K +                 +  SDDSSDE+
Sbjct: 181  E-QLGTGDGKPARLVKIVDCGETSENKIHGAVGTEKGRKKKSGKALS--SDDSSDEQ 234



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 67/218 (30%), Positives = 90/218 (41%), Gaps = 6/218 (2%)
 Frame = -1

Query: 1580 TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDQ----- 1416
            T S  S SDD+ A    SA     NS H E          KHP     +   ++Q     
Sbjct: 386  TSSSRSSSDDEKASXHVSAHKTS-NSTHTE---------SKHPXNLGKKTGALEQDTIAK 435

Query: 1415 -QKKDGLKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKSDKIANKYPDSDNEXXXXXXXX 1239
             QK   LK+++DDSSHEEGEF+Q K + LNNGH TE KS+K A ++P SD+         
Sbjct: 436  PQKDHELKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTP 494

Query: 1238 XXXXRYQXXXXXXXXXXXXXXXXXXXXXXXXXXPAGRYNRQTNXXXXXXXXXXXXXXXXX 1059
                R +                             R + + N                 
Sbjct: 495  SPRRRAKISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATE 554

Query: 1058 XPVAXXXXXXXXXXSPDGNPKRIRRGRGFTERYASARK 945
             P +          SP+G PKRIR+GRGFT+R++ AR+
Sbjct: 555  PPASNHGRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 592


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