BLASTX nr result

ID: Coptis24_contig00000211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000211
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303672.1| predicted protein [Populus trichocarpa] gi|2...   658   0.0  
sp|Q03684.1|BIP4_TOBAC RecName: Full=Luminal-binding protein 4; ...   656   0.0  
ref|XP_002299448.1| predicted protein [Populus trichocarpa] gi|2...   656   0.0  
ref|XP_002518865.1| heat shock protein, putative [Ricinus commun...   654   0.0  
sp|Q03685.1|BIP5_TOBAC RecName: Full=Luminal-binding protein 5; ...   653   0.0  

>ref|XP_002303672.1| predicted protein [Populus trichocarpa] gi|222841104|gb|EEE78651.1|
            predicted protein [Populus trichocarpa]
          Length = 666

 Score =  658 bits (1697), Expect = 0.0
 Identities = 340/404 (84%), Positives = 353/404 (87%)
 Frame = -1

Query: 1214 GCLSAFVIAKDEAPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRIXXXXXXXXXX 1035
            GCL A  IAK+EA KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN            
Sbjct: 19   GCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN------------ 66

Query: 1034 XXXXXXXNDQGNRITPSWVAFTDGERLIGEXXXXXXXXXAERTVFDVKRLIGRKFEDKEV 855
                        RITPSWVAFTD ERLIGE          ERT+FDVKRLIGRKFEDKEV
Sbjct: 67   ------------RITPSWVAFTDSERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEV 114

Query: 854  QRDMKLVPFKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 675
            Q+DMKLVP+KIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA
Sbjct: 115  QKDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 174

Query: 674  VITVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 495
            V+TVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG
Sbjct: 175  VVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 234

Query: 494  TFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGXX 315
            TFDVSVLTIDNGVFEVL+TNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALG  
Sbjct: 235  TFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKL 294

Query: 314  XXXXXXXXXXLSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 135
                      LS+QHQVRVEIESL+DG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMDD
Sbjct: 295  RRECERAKRALSSQHQVRVEIESLHDGMDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 354

Query: 134  AGLEKNQIDEIVLVGGSTRIPKVQELLKEFFNGKEPNKGVNPDE 3
            AGLEKNQIDEIVLVGGSTRIPKVQ+LLK++F+GKEPNKGVNPDE
Sbjct: 355  AGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDE 398


>sp|Q03684.1|BIP4_TOBAC RecName: Full=Luminal-binding protein 4; Short=BiP 4; AltName:
            Full=78 kDa glucose-regulated protein homolog 4;
            Short=GRP-78-4; Flags: Precursor gi|19811|emb|CAA42659.1|
            luminal binding protein (BiP) [Nicotiana tabacum]
          Length = 667

 Score =  656 bits (1693), Expect = 0.0
 Identities = 338/404 (83%), Positives = 353/404 (87%)
 Frame = -1

Query: 1214 GCLSAFVIAKDEAPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRIXXXXXXXXXX 1035
            GCL AF IA +EA KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN            
Sbjct: 21   GCLFAFSIATEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN------------ 68

Query: 1034 XXXXXXXNDQGNRITPSWVAFTDGERLIGEXXXXXXXXXAERTVFDVKRLIGRKFEDKEV 855
                        RITPSWVAFTDGERLIGE          ERTVFDVKRLIGRKF+DKEV
Sbjct: 69   ------------RITPSWVAFTDGERLIGEAAKNLAAVNPERTVFDVKRLIGRKFDDKEV 116

Query: 854  QRDMKLVPFKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 675
            QRDMKLVP+KIVNKDGKPYIQVKIKDGETK+FSPEEISAMILTKMKETAEA+LGKKIKDA
Sbjct: 117  QRDMKLVPYKIVNKDGKPYIQVKIKDGETKIFSPEEISAMILTKMKETAEAYLGKKIKDA 176

Query: 674  VITVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 495
            V+TVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG
Sbjct: 177  VVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 236

Query: 494  TFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGXX 315
            TFDVS+LTIDNGVFEVL+TNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALG  
Sbjct: 237  TFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKL 296

Query: 314  XXXXXXXXXXLSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 135
                      LS+QHQVRVEIESL+DG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMDD
Sbjct: 297  RREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 356

Query: 134  AGLEKNQIDEIVLVGGSTRIPKVQELLKEFFNGKEPNKGVNPDE 3
            AGLEK QIDEIVLVGGSTRIPKVQ+LLK++F+GKEPNKGVNPDE
Sbjct: 357  AGLEKTQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDE 400


>ref|XP_002299448.1| predicted protein [Populus trichocarpa] gi|222846706|gb|EEE84253.1|
            predicted protein [Populus trichocarpa]
          Length = 666

 Score =  656 bits (1692), Expect = 0.0
 Identities = 339/404 (83%), Positives = 353/404 (87%)
 Frame = -1

Query: 1214 GCLSAFVIAKDEAPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRIXXXXXXXXXX 1035
            GCL A  IAK+EA KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN            
Sbjct: 19   GCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN------------ 66

Query: 1034 XXXXXXXNDQGNRITPSWVAFTDGERLIGEXXXXXXXXXAERTVFDVKRLIGRKFEDKEV 855
                        RITPSWVAFTD ERLIGE         AERT+FDVKRLIGRKFEDKEV
Sbjct: 67   ------------RITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEV 114

Query: 854  QRDMKLVPFKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 675
            Q+DMKL P+KIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA
Sbjct: 115  QKDMKLFPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 174

Query: 674  VITVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 495
            V+TVPAYFNDAQRQATKDAG+IAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG
Sbjct: 175  VVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 234

Query: 494  TFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGXX 315
            TFDVSVLTIDNGVFEVL+TNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALG  
Sbjct: 235  TFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKL 294

Query: 314  XXXXXXXXXXLSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 135
                      LS+QHQVRVEIESLYDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+D
Sbjct: 295  RRECERAKRALSSQHQVRVEIESLYDGMDFSEPLTRARFEELNNDLFRKTMGPVKKAMED 354

Query: 134  AGLEKNQIDEIVLVGGSTRIPKVQELLKEFFNGKEPNKGVNPDE 3
            AGLEKNQIDEIVLVGGSTRIPKVQ+LLK++F+GKEPNKGVNPDE
Sbjct: 355  AGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDE 398


>ref|XP_002518865.1| heat shock protein, putative [Ricinus communis]
            gi|223541852|gb|EEF43398.1| heat shock protein, putative
            [Ricinus communis]
          Length = 664

 Score =  654 bits (1686), Expect = 0.0
 Identities = 336/404 (83%), Positives = 353/404 (87%)
 Frame = -1

Query: 1214 GCLSAFVIAKDEAPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRIXXXXXXXXXX 1035
            GCL A  IAK+EA KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN            
Sbjct: 19   GCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN------------ 66

Query: 1034 XXXXXXXNDQGNRITPSWVAFTDGERLIGEXXXXXXXXXAERTVFDVKRLIGRKFEDKEV 855
                        RITPSWVAFTD ERLIGE          ERT+FDVKRLIGRKFEDKEV
Sbjct: 67   ------------RITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEV 114

Query: 854  QRDMKLVPFKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 675
            QRDMKLVP+KIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEA+LGKKIKDA
Sbjct: 115  QRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDA 174

Query: 674  VITVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 495
            V+TVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDK+GGEKNILVFDLGGG
Sbjct: 175  VVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKRGGEKNILVFDLGGG 234

Query: 494  TFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGXX 315
            TFDVS+LTIDNGVFEVL+TNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALG  
Sbjct: 235  TFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKL 294

Query: 314  XXXXXXXXXXLSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 135
                      LS+QHQVRVEIESL+DG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+D
Sbjct: 295  RREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMED 354

Query: 134  AGLEKNQIDEIVLVGGSTRIPKVQELLKEFFNGKEPNKGVNPDE 3
            AGL+KNQIDEIVLVGGSTRIPKVQ+LLK++F+GKEPNKGVNPDE
Sbjct: 355  AGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDE 398


>sp|Q03685.1|BIP5_TOBAC RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName:
            Full=78 kDa glucose-regulated protein homolog 5;
            Short=GRP-78-5; Flags: Precursor gi|19813|emb|CAA42660.1|
            luminal binding protein (BiP) [Nicotiana tabacum]
          Length = 668

 Score =  653 bits (1684), Expect = 0.0
 Identities = 337/404 (83%), Positives = 353/404 (87%)
 Frame = -1

Query: 1214 GCLSAFVIAKDEAPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRIXXXXXXXXXX 1035
            G L AF IAK+EA KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN            
Sbjct: 20   GSLFAFSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGN------------ 67

Query: 1034 XXXXXXXNDQGNRITPSWVAFTDGERLIGEXXXXXXXXXAERTVFDVKRLIGRKFEDKEV 855
                        RITPSWVAFTDGERLIGE          ERT+FDVKRLIGRKF+DKEV
Sbjct: 68   ------------RITPSWVAFTDGERLIGEAAKNQAAVNPERTIFDVKRLIGRKFDDKEV 115

Query: 854  QRDMKLVPFKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDA 675
            QRD KLVP++IVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEA+LGKKIKDA
Sbjct: 116  QRDKKLVPYEIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDA 175

Query: 674  VITVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 495
            V+TVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG
Sbjct: 176  VVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGG 235

Query: 494  TFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGXX 315
            TFDVS+LTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALG  
Sbjct: 236  TFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKL 295

Query: 314  XXXXXXXXXXLSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDD 135
                      LS+QHQVRVEIESL+DG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+D
Sbjct: 296  RREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMED 355

Query: 134  AGLEKNQIDEIVLVGGSTRIPKVQELLKEFFNGKEPNKGVNPDE 3
            AGLEKNQIDEIVLVGGSTRIPKVQ+LLK++F+GKEPNKGVNPDE
Sbjct: 356  AGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDE 399


Top