BLASTX nr result
ID: Coptis24_contig00000182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000182
(1032 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15033.3| unnamed protein product [Vitis vinifera] 313 4e-83
ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicag... 273 3e-80
ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arab... 246 8e-73
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara... 246 2e-72
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin... 246 2e-72
>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
Length = 3085
Score = 313 bits (802), Expect = 4e-83
Identities = 172/338 (50%), Positives = 216/338 (63%), Gaps = 11/338 (3%)
Frame = -3
Query: 1030 KELVNCISTLHSLLENPPGDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLK 851
+E+ C+ TLHSLLENPPGDFPDN+R++ V+G + I+S + DEG I+ KLI+CIN +LLK
Sbjct: 189 EEVFRCVLTLHSLLENPPGDFPDNLREDAVKGFIGIFSFLRDEGKIARKLIECINIFLLK 248
Query: 850 DGPNLDREYLESIHSAVHGFAFRSWPKIQNLGLKDAVILYARLHLNLIRNATDGVHLVEQ 671
DGPNL + LE IH+AV F RSW + GLKDAVI YARL LNL R A DG LVEQ
Sbjct: 249 DGPNLGCQCLE-IHNAVQQFVLRSWLTSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQ 307
Query: 670 VLDVC-EELDQSNTTNTSITQG----------MTNSQIQLMELAAFVFFKACVNTTKVPS 524
+LDV ELDQ+N ++TS+ +T+SQ L+ELAA VF++AC N K PS
Sbjct: 308 LLDVVGRELDQTNISSTSVPWSDTTKDDRLGTLTSSQCGLVELAALVFYRACANPLKAPS 367
Query: 523 SEKQTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNYHSRICKELLVYWFGGICESFERIV 344
+ K+ KRE+A R+GLM GKWLWN+AFC L NYH+RICK+L VYWF GIC SFERI+
Sbjct: 368 TAKRAKREHAAAYFREGLMKGKWLWNAAFCCLTHNYHTRICKDLFVYWFEGICTSFERIL 427
Query: 343 SEGNAMRTYDGLLWVLRSLDELSSIQLLPGLGVEASQCLSLGMNELFSSRTTHFQ*RDSS 164
+E N YDGLLW LRSL E SS LLP LG E S NE + T
Sbjct: 428 NEANMEHAYDGLLWTLRSLQEFSSELLLPVLGAEMLMRPSFTSNEFDNGWHT-------- 479
Query: 163 CRCCIVASCKYHFKGVGQSSNCTSGYMGAPIIHAHVIN 50
+ SC H G+ SN TS A ++ ++++
Sbjct: 480 -----IWSCLMH--GLPIFSNITSVVDAALVLLGNIVS 510
Score = 83.2 bits (204), Expect = 1e-13
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -1
Query: 192 LPIFSNVTXXXXXXXXXXANIISKELVNLPIVPQDIWELRLFMHMSSMSALYFLLCYFTR 13
LPIFSN+T NI+S +L++ PIVPQ+IW+LRLF HM S+S LYF+ CYF+R
Sbjct: 488 LPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVLYFISCYFSR 547
Query: 12 KGSQ 1
KGSQ
Sbjct: 548 KGSQ 551
>ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicago truncatula]
gi|355490309|gb|AES71512.1| Serine/threonine protein
kinase ATM [Medicago truncatula]
Length = 641
Score = 273 bits (697), Expect(2) = 3e-80
Identities = 142/294 (48%), Positives = 195/294 (66%), Gaps = 17/294 (5%)
Frame = -3
Query: 1030 KELVNCISTLHSLLENPPGDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLK 851
+E+ I TLHSLL+ PPGD+P N+R++I +G + I S + +EG +S KL++CINTYLL
Sbjct: 229 EEVFRNILTLHSLLDYPPGDYPVNLREDIAKGFVRICSFIREEGKVSRKLVECINTYLLN 288
Query: 850 DGPNLDREYLESIHSAVHGFAFRSWPKIQNLGLKDAVILYARLHLNLIRNATDGVHLVEQ 671
DGPNL + LE IH A+ F F W + LKD+++ YAR LNL R A D LVEQ
Sbjct: 289 DGPNLGCQLLE-IHKAIQQFLFHCWLTTHDRVLKDSLMFYARTQLNLTRGAADRCLLVEQ 347
Query: 670 VLDVC-EELDQSNTTNTSITQG----------MTNSQIQLMELAAFVFFK------ACVN 542
+LDV ++LDQ + ++TS+ +G +++SQ L+ELAA +F++ AC+N
Sbjct: 348 LLDVIYKDLDQGSMSSTSMPRGDGNKDDKLGTLSSSQCGLVELAAVLFYRVATRNSACLN 407
Query: 541 TTKVPSSEKQTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNYHSRICKELLVYWFGGICE 362
TT+ SEK+ KRE A V LR+ LM GKWLWN+AFC+L RN+HSR+CK+L +YWF GIC
Sbjct: 408 TTRASPSEKRVKREPAAVVLREALMKGKWLWNAAFCYLTRNFHSRMCKDLFLYWFEGICM 467
Query: 361 SFERIVSEGNAMRTYDGLLWVLRSLDELSSIQLLPGLGVEASQCLSLGMNELFS 200
SF+RI++ N R YDGLLW LR ELSS LLP ++ S +NE+ +
Sbjct: 468 SFDRILNSANVDRAYDGLLWTLRYATELSSALLLPNSMIKISSMPPSTLNEVIN 521
Score = 53.5 bits (127), Expect(2) = 3e-80
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Frame = -1
Query: 192 LPIFSNVTXXXXXXXXXXANIISKELVNLPIVPQDIWELRLFMHMSSM------------ 49
LPIFSN+ +NI S +LV+ ++PQD+W+L+ F +SM
Sbjct: 534 LPIFSNIAILVDAALTLLSNITSNDLVDTCLIPQDVWDLQFFKRPTSMEVKIEILPRTWR 593
Query: 48 SALYFLLCYFTRKGS 4
S L+F CYF+RK S
Sbjct: 594 SILHFFSCYFSRKNS 608
>ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp.
lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein
ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata]
Length = 3832
Score = 246 bits (628), Expect(2) = 8e-73
Identities = 131/276 (47%), Positives = 180/276 (65%), Gaps = 10/276 (3%)
Frame = -3
Query: 1030 KELVNCISTLHSLLENPPGDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLK 851
+E I TL SLLEN PGDFPD++R+EIV GL+ I+S V DEG +S KLI+C+NT+LLK
Sbjct: 978 EEAFRYILTLQSLLENSPGDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLK 1037
Query: 850 DGPNLDREYLESIHSAVHGFAFRSWPKIQNLGLKDAVILYARLHLNLIRNATDGVHLVEQ 671
DGPNL E IH+AV F FR W + LK+ ++ Y RL LNL R +++ LVEQ
Sbjct: 1038 DGPNLGSLSFE-IHNAVEQFVFRCWLTTHDKNLKEILVSYGRLQLNLTRGSSESSSLVEQ 1096
Query: 670 VLDVCEELDQSNTTNTSITQGMTNS----------QIQLMELAAFVFFKACVNTTKVPSS 521
+LDV +++TS + G T Q L+ELAA VF++ACVNT++ S
Sbjct: 1097 LLDVVTRELDLGSSSTSASWGDTTKDEKLGALNSYQNSLVELAAHVFYRACVNTSRPSMS 1156
Query: 520 EKQTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNYHSRICKELLVYWFGGICESFERIVS 341
EK+ +R++ +R+ L +GKWLW +AF LVRNY +RI +LL+YWF IC +F+R++
Sbjct: 1157 EKRARRQHIAMRMVDALTEGKWLWCAAFGCLVRNYCARINMDLLIYWFEAICTNFQRLLE 1216
Query: 340 EGNAMRTYDGLLWVLRSLDELSSIQLLPGLGVEASQ 233
+ + R+YDGLLW LRSL LSS LLP ++ S+
Sbjct: 1217 DASMRRSYDGLLWTLRSLQGLSSGLLLPDTTMDISK 1252
Score = 55.1 bits (131), Expect(2) = 8e-73
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = -1
Query: 192 LPIFSNVTXXXXXXXXXXANIISKELVNLPIVPQDIWELRLFMHMSSMSALYFLLCYFTR 13
L FS+++ +IIS +N+ I+PQ++W+ +LF H+ S ALYF+ CYF+R
Sbjct: 1275 LATFSSMSVIVDAVLVLLGSIISSNHINVGILPQEVWDHQLFRHIPSEPALYFIACYFSR 1334
Query: 12 KGSQ 1
G Q
Sbjct: 1335 LGCQ 1338
>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
Length = 3856
Score = 246 bits (629), Expect(2) = 2e-72
Identities = 132/276 (47%), Positives = 183/276 (66%), Gaps = 10/276 (3%)
Frame = -3
Query: 1030 KELVNCISTLHSLLENPPGDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLK 851
+E I TL SLLEN PGDFPD++R+EIV GL+ I+S V DEG +S KLI+C+NT+LLK
Sbjct: 1000 EEAFRYILTLQSLLENSPGDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLK 1059
Query: 850 DGPNLDREYLESIHSAVHGFAFRSWPKIQNLGLKDAVILYARLHLNLIRNATDGVHLVEQ 671
DGPNL LE IH+AV F FR W + LK+ ++ Y RL LNL R++++ LVEQ
Sbjct: 1060 DGPNLGSLSLE-IHNAVEQFVFRCWLTTHDKNLKEILVSYGRLQLNLTRDSSESSSLVEQ 1118
Query: 670 VLDVC-EELDQSN---------TTNTSITQGMTNSQIQLMELAAFVFFKACVNTTKVPSS 521
+LDV ELD + TT +++ Q L+ELAA VF++ACVNT++ S
Sbjct: 1119 LLDVVTRELDLGSSSSSASWGDTTKDEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLS 1178
Query: 520 EKQTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNYHSRICKELLVYWFGGICESFERIVS 341
EK+ +R++ +R+ L +GKWLW +AF LVRNY +RI +LL+YWF IC +F+R++
Sbjct: 1179 EKRARRQHIAMRMVDALTEGKWLWCAAFGCLVRNYCARINMDLLIYWFEAICTNFQRLLE 1238
Query: 340 EGNAMRTYDGLLWVLRSLDELSSIQLLPGLGVEASQ 233
+ + R+YDGLLW LRSL LSS LP + ++ S+
Sbjct: 1239 DASMRRSYDGLLWTLRSLQGLSSGLSLPDITMDISK 1274
Score = 53.5 bits (127), Expect(2) = 2e-72
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = -1
Query: 192 LPIFSNVTXXXXXXXXXXANIISKELVNLPIVPQDIWELRLFMHMSSMSALYFLLCYFTR 13
L FS+++ +IIS + + I+PQ++W+ +LF H+ S ALYF+ CYF+R
Sbjct: 1297 LATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIACYFSR 1356
Query: 12 KGSQ 1
G Q
Sbjct: 1357 MGCQ 1360
>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
Full=Ataxia telangiectasia mutated homolog; Short=AtATM
gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
Length = 3856
Score = 246 bits (629), Expect(2) = 2e-72
Identities = 132/276 (47%), Positives = 183/276 (66%), Gaps = 10/276 (3%)
Frame = -3
Query: 1030 KELVNCISTLHSLLENPPGDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLK 851
+E I TL SLLEN PGDFPD++R+EIV GL+ I+S V DEG +S KLI+C+NT+LLK
Sbjct: 1000 EEAFRYILTLQSLLENSPGDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLK 1059
Query: 850 DGPNLDREYLESIHSAVHGFAFRSWPKIQNLGLKDAVILYARLHLNLIRNATDGVHLVEQ 671
DGPNL LE IH+AV F FR W + LK+ ++ Y RL LNL R++++ LVEQ
Sbjct: 1060 DGPNLGSLSLE-IHNAVEQFVFRCWLTTHDKNLKEILVSYGRLQLNLTRDSSESSSLVEQ 1118
Query: 670 VLDVC-EELDQSN---------TTNTSITQGMTNSQIQLMELAAFVFFKACVNTTKVPSS 521
+LDV ELD + TT +++ Q L+ELAA VF++ACVNT++ S
Sbjct: 1119 LLDVVTRELDLGSSSSSASWGDTTKDEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLS 1178
Query: 520 EKQTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNYHSRICKELLVYWFGGICESFERIVS 341
EK+ +R++ +R+ L +GKWLW +AF LVRNY +RI +LL+YWF IC +F+R++
Sbjct: 1179 EKRARRQHIAMRMVDALTEGKWLWCAAFGCLVRNYCARINMDLLIYWFEAICTNFQRLLE 1238
Query: 340 EGNAMRTYDGLLWVLRSLDELSSIQLLPGLGVEASQ 233
+ + R+YDGLLW LRSL LSS LP + ++ S+
Sbjct: 1239 DASMRRSYDGLLWTLRSLQGLSSGLSLPDITMDISK 1274
Score = 53.5 bits (127), Expect(2) = 2e-72
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = -1
Query: 192 LPIFSNVTXXXXXXXXXXANIISKELVNLPIVPQDIWELRLFMHMSSMSALYFLLCYFTR 13
L FS+++ +IIS + + I+PQ++W+ +LF H+ S ALYF+ CYF+R
Sbjct: 1297 LATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIACYFSR 1356
Query: 12 KGSQ 1
G Q
Sbjct: 1357 MGCQ 1360