BLASTX nr result

ID: Coptis24_contig00000181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000181
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ77893.1| GASA [Fagus sylvatica]                                145   1e-32
ref|XP_002284937.1| PREDICTED: gibberellin-regulated protein 6 [...   144   1e-32
ref|NP_001240084.1| uncharacterized protein LOC100787539 precurs...   141   1e-31
gb|ACF74297.1| gibberellin-regulated protein [Arachis hypogaea]       141   1e-31
gb|ACM47319.1| Gasa4-like protein [Rosa x damascena] gi|22216007...   141   1e-31

>emb|CAJ77893.1| GASA [Fagus sylvatica]
          Length = 107

 Score =  145 bits (365), Expect = 1e-32
 Identities = 65/94 (69%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
 Frame = -1

Query: 570 SMLQSTLVLASETQA--NLDGGRSYGQGALRSYQCPNQCSRRCRKVGHHHQTCMFLCQKC 397
           SMLQ T+V+AS      + D    YGQG+L+SYQCP+QCSRRC K   +H+ CMF CQKC
Sbjct: 16  SMLQ-TMVMASHGHGGHHYDNTSKYGQGSLKSYQCPSQCSRRCSKT-QYHKPCMFFCQKC 73

Query: 396 CTKCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 295
           C KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 74  CKKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107


>ref|XP_002284937.1| PREDICTED: gibberellin-regulated protein 6 [Vitis vinifera]
           gi|297733977|emb|CBI15224.3| unnamed protein product
           [Vitis vinifera]
          Length = 104

 Score =  144 bits (364), Expect = 1e-32
 Identities = 62/88 (70%), Positives = 71/88 (80%)
 Frame = -1

Query: 558 STLVLASETQANLDGGRSYGQGALRSYQCPNQCSRRCRKVGHHHQTCMFLCQKCCTKCLC 379
           +T V+A E Q +LD G SYG G+L+S QCP+QC+RRC K   +H+ CMF CQKCC KCLC
Sbjct: 19  ATKVMAKEAQYHLDSG-SYGPGSLKSNQCPSQCTRRCSKT-QYHKPCMFFCQKCCAKCLC 76

Query: 378 VPPGTYGNKAVCPCYNNWKTKRGGPKCP 295
           VPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 77  VPPGYYGNKAVCPCYNNWKTKEGGPKCP 104


>ref|NP_001240084.1| uncharacterized protein LOC100787539 precursor [Glycine max]
           gi|255637976|gb|ACU19304.1| unknown [Glycine max]
           gi|323319531|gb|ADX36136.1| gibberellic acid-stimulated
           protein 2 [Glycine soja]
          Length = 107

 Score =  141 bits (356), Expect = 1e-31
 Identities = 60/93 (64%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
 Frame = -1

Query: 570 SMLQSTLVLASETQANL-DGGRSYGQGALRSYQCPNQCSRRCRKVGHHHQTCMFLCQKCC 394
           SMLQ+ ++ A+E   +L D    YG G+++ YQCP+QCSRRC +   +H+ CMF CQKCC
Sbjct: 16  SMLQTVVMAANEQGGHLYDNKSKYGSGSVKRYQCPSQCSRRCSQT-QYHKPCMFFCQKCC 74

Query: 393 TKCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 295
            KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 75  RKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107


>gb|ACF74297.1| gibberellin-regulated protein [Arachis hypogaea]
          Length = 107

 Score =  141 bits (356), Expect = 1e-31
 Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
 Frame = -1

Query: 570 SMLQSTLVLASETQAN--LDGGRSYGQGALRSYQCPNQCSRRCRKVGHHHQTCMFLCQKC 397
           SMLQ T+V+A+  Q     D    YG G+++SYQCP+QCSRRC K   +H+ CMF CQKC
Sbjct: 16  SMLQ-TMVMAANGQGGHLYDNKSQYGPGSVKSYQCPSQCSRRCGKT-QYHKPCMFFCQKC 73

Query: 396 CTKCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 295
           C KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 74  CRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107


>gb|ACM47319.1| Gasa4-like protein [Rosa x damascena] gi|222160078|gb|ACM47320.1|
           Gasa4-like protein [Rosa x damascena]
          Length = 108

 Score =  141 bits (355), Expect = 1e-31
 Identities = 59/92 (64%), Positives = 70/92 (76%)
 Frame = -1

Query: 570 SMLQSTLVLASETQANLDGGRSYGQGALRSYQCPNQCSRRCRKVGHHHQTCMFLCQKCCT 391
           SMLQS ++       +  G   YG G+L+SYQCP+QC+RRC +   +H+ CMF CQKCC+
Sbjct: 18  SMLQSMVMANHGHGGHHKGNNQYGPGSLKSYQCPSQCTRRCSQT-QYHKPCMFFCQKCCS 76

Query: 390 KCLCVPPGTYGNKAVCPCYNNWKTKRGGPKCP 295
           KCLCVPPG YGNKAVCPCYNNWKTK GGPKCP
Sbjct: 77  KCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 108


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