BLASTX nr result
ID: Coptis24_contig00000180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000180
(890 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera] 98 2e-40
ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267... 98 2e-40
emb|CBI17132.3| unnamed protein product [Vitis vinifera] 98 2e-40
gb|EEC74274.1| hypothetical protein OsI_09509 [Oryza sativa Indi... 80 3e-28
gb|EEE58074.1| hypothetical protein OsJ_08935 [Oryza sativa Japo... 80 4e-27
>emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]
Length = 1252
Score = 97.8 bits (242), Expect(3) = 2e-40
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = -2
Query: 457 KGSSSVVILSRPLSKSEGGLRKKLQSSLEAQIHFLIKKCRTLAGSEGSHTGSRGGGNVTS 278
KGS SVV+L+RP SKSEGG RKKLQSSLEAQI FLIKKCRTL GSE +H+ SRGGG +S
Sbjct: 147 KGSGSVVVLARPGSKSEGGFRKKLQSSLEAQIRFLIKKCRTLTGSE-THSASRGGGVSSS 205
Query: 277 APFFSLRLTR 248
AP FSL +R
Sbjct: 206 APLFSLDASR 215
Score = 60.1 bits (144), Expect(3) = 2e-40
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 621 YSSLFPGQCTPV-LFVFIDNFWETANSDSNIEDSA*TISMNQSSNISGLPRSSLQIKG 451
Y+SLFPGQC PV LFVF+D+F + N SN+++S S NQSS++S L R SL KG
Sbjct: 92 YASLFPGQCNPVTLFVFLDDFSDVLNPTSNVDEST-DNSFNQSSSLSNLARPSLPTKG 148
Score = 55.8 bits (133), Expect(3) = 2e-40
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = -1
Query: 869 NHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSPGR 690
+ FDTQVLKKFR+LQ AK++L PFV+++ NPSPGR
Sbjct: 14 SRFDTQVLKKFRVLQAAKHSLAPFVRSRTTPTSISTSRPPSSRPSLSATSS--NNPSPGR 71
Query: 689 LSGNGVTSYHCSAISLMSGSGSH 621
G G ++ + S+ISLMSG GS+
Sbjct: 72 --GGGSSNRNTSSISLMSGLGSY 92
>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
Length = 1226
Score = 97.8 bits (242), Expect(3) = 2e-40
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = -2
Query: 457 KGSSSVVILSRPLSKSEGGLRKKLQSSLEAQIHFLIKKCRTLAGSEGSHTGSRGGGNVTS 278
KGS SVV+L+RP SKSEGG RKKLQSSLEAQI FLIKKCRTL GSE +H+ SRGGG +S
Sbjct: 300 KGSGSVVVLARPGSKSEGGFRKKLQSSLEAQIRFLIKKCRTLTGSE-THSASRGGGVSSS 358
Query: 277 APFFSLRLTR 248
AP FSL +R
Sbjct: 359 APLFSLDASR 368
Score = 60.1 bits (144), Expect(3) = 2e-40
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 621 YSSLFPGQCTPV-LFVFIDNFWETANSDSNIEDSA*TISMNQSSNISGLPRSSLQIKG 451
Y+SLFPGQC PV LFVF+D+F + N SN+++S S NQSS++S L R SL KG
Sbjct: 245 YASLFPGQCNPVTLFVFLDDFSDVLNPTSNVDEST-DNSFNQSSSLSNLARPSLPTKG 301
Score = 55.8 bits (133), Expect(3) = 2e-40
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = -1
Query: 869 NHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSPGR 690
+ FDTQVLKKFR+LQ AK++L PFV+++ NPSPGR
Sbjct: 167 SRFDTQVLKKFRVLQAAKHSLAPFVRSRTTPTSISTSRPPSSRPSLSATSS--NNPSPGR 224
Query: 689 LSGNGVTSYHCSAISLMSGSGSH 621
G G ++ + S+ISLMSG GS+
Sbjct: 225 --GGGSSNRNTSSISLMSGLGSY 245
>emb|CBI17132.3| unnamed protein product [Vitis vinifera]
Length = 935
Score = 97.8 bits (242), Expect(3) = 2e-40
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = -2
Query: 457 KGSSSVVILSRPLSKSEGGLRKKLQSSLEAQIHFLIKKCRTLAGSEGSHTGSRGGGNVTS 278
KGS SVV+L+RP SKSEGG RKKLQSSLEAQI FLIKKCRTL GSE +H+ SRGGG +S
Sbjct: 309 KGSGSVVVLARPGSKSEGGFRKKLQSSLEAQIRFLIKKCRTLTGSE-THSASRGGGVSSS 367
Query: 277 APFFSLRLTR 248
AP FSL +R
Sbjct: 368 APLFSLDASR 377
Score = 60.1 bits (144), Expect(3) = 2e-40
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 621 YSSLFPGQCTPV-LFVFIDNFWETANSDSNIEDSA*TISMNQSSNISGLPRSSLQIKG 451
Y+SLFPGQC PV LFVF+D+F + N SN+++S S NQSS++S L R SL KG
Sbjct: 254 YASLFPGQCNPVTLFVFLDDFSDVLNPTSNVDEST-DNSFNQSSSLSNLARPSLPTKG 310
Score = 55.8 bits (133), Expect(3) = 2e-40
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = -1
Query: 869 NHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSPGR 690
+ FDTQVLKKFR+LQ AK++L PFV+++ NPSPGR
Sbjct: 176 SRFDTQVLKKFRVLQAAKHSLAPFVRSRTTPTSISTSRPPSSRPSLSATSS--NNPSPGR 233
Query: 689 LSGNGVTSYHCSAISLMSGSGSH 621
G G ++ + S+ISLMSG GS+
Sbjct: 234 --GGGSSNRNTSSISLMSGLGSY 254
>gb|EEC74274.1| hypothetical protein OsI_09509 [Oryza sativa Indica Group]
Length = 1145
Score = 80.1 bits (196), Expect(3) = 3e-28
Identities = 41/71 (57%), Positives = 50/71 (70%)
Frame = -2
Query: 460 NKGSSSVVILSRPLSKSEGGLRKKLQSSLEAQIHFLIKKCRTLAGSEGSHTGSRGGGNVT 281
+KGSSSVV+L+RP +S+G KKL SS+E QI FL+KKCRTL G E H SRG NV+
Sbjct: 156 SKGSSSVVMLARPAIRSDGTFSKKLHSSVEGQIRFLLKKCRTLVGLEPGHIVSRGVSNVS 215
Query: 280 SAPFFSLRLTR 248
P FSL +R
Sbjct: 216 HLPLFSLDTSR 226
Score = 48.5 bits (114), Expect(3) = 3e-28
Identities = 33/81 (40%), Positives = 41/81 (50%)
Frame = -1
Query: 863 FDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSPGRLS 684
FDTQ+LKKFRLLQ +K+A+ PFV++ S P+ R
Sbjct: 28 FDTQILKKFRLLQSSKHAIAPFVKSLVAPAVPSKVARSNTPTKPTHRASSISPPA--RRG 85
Query: 683 GNGVTSYHCSAISLMSGSGSH 621
G H SAISLMSG+GSH
Sbjct: 86 GR-----HPSAISLMSGTGSH 101
Score = 43.5 bits (101), Expect(3) = 3e-28
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -3
Query: 612 LFPGQCTPV-LFVFIDNFWETANSDSNIEDSA*TISMNQSSNISGLPRSSLQIKG 451
+ PG C PV LFVF D+ + + ++ +D+ T S NQ+SN GLP+ ++ KG
Sbjct: 104 MLPGLCIPVVLFVFEDDITDAPGAPTSPDDTNDTSSSNQASNTDGLPKPNMTSKG 158
>gb|EEE58074.1| hypothetical protein OsJ_08935 [Oryza sativa Japonica Group]
Length = 1268
Score = 80.1 bits (196), Expect(3) = 4e-27
Identities = 41/71 (57%), Positives = 50/71 (70%)
Frame = -2
Query: 460 NKGSSSVVILSRPLSKSEGGLRKKLQSSLEAQIHFLIKKCRTLAGSEGSHTGSRGGGNVT 281
+KGSSSVV+L+RP +S+G KKL SS+E QI FL+KKCRTL G E H SRG NV+
Sbjct: 258 SKGSSSVVMLARPAIRSDGTFSKKLHSSVEGQIRFLLKKCRTLVGLEPGHIVSRGVSNVS 317
Query: 280 SAPFFSLRLTR 248
P FSL +R
Sbjct: 318 HLPLFSLDTSR 328
Score = 48.5 bits (114), Expect(3) = 4e-27
Identities = 33/81 (40%), Positives = 41/81 (50%)
Frame = -1
Query: 863 FDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSPGRLS 684
FDTQ+LKKFRLLQ +K+A+ PFV++ S P+ R
Sbjct: 131 FDTQILKKFRLLQSSKHAIAPFVKSLVAPAVPSKVARSNTPTKPTHRASSISPPA--RRG 188
Query: 683 GNGVTSYHCSAISLMSGSGSH 621
G H SAISLMSG+GSH
Sbjct: 189 GR-----HPSAISLMSGTGSH 204
Score = 39.7 bits (91), Expect(3) = 4e-27
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -3
Query: 612 LFPGQCTPV-LFVFIDNFWETANSDSNIEDSA*TISMNQSSNISGLPRSSLQIKG 451
+ PG C PV LFVF D+ + + ++ +D+ T S NQ+SN GLP+ ++ KG
Sbjct: 207 MLPGLCIPVVLFVFEDDITDAPGAPTSPDDTNDT-SSNQASNTDGLPKPNMTSKG 260