BLASTX nr result

ID: Coptis24_contig00000179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000179
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp....   136   2e-30
emb|CBI17132.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267...   132   4e-29
ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera]   102   3e-20

>ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324950|gb|EFH55370.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1189

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/125 (52%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = +2

Query: 80  SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFSIEKGDGVKDWFKFRKICYFY 259
           S GVVV+GF+ +  ++ + L+N+VLD+NVFGSG+L+K  +++K D  +DWF+FRKICY++
Sbjct: 43  SNGVVVVGFLSRRPDDSSHLINQVLDNNVFGSGKLNKILTVDKPD-FQDWFRFRKICYYH 101

Query: 260 EEEKGLVFLLFVPTWNLCMDEDKEK-LDLVVDEYEFGDLQGVLLMFSVCHVIIFLQGGSH 436
           EE+KG+VF+ F P     +    +   D V++E EFGDLQG+L MFSVCHVII +Q GS 
Sbjct: 102 EEDKGIVFVQFSPIICPALSSSSDSGFDSVLEEREFGDLQGLLFMFSVCHVIINIQEGSR 161

Query: 437 FDTQV 451
           FDT++
Sbjct: 162 FDTRL 166


>emb|CBI17132.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/127 (52%), Positives = 91/127 (71%), Gaps = 3/127 (2%)
 Frame = +2

Query: 80  SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFSIEKGDGVKDWFKFRKICYFY 259
           SE VVV+GFIG+  ++V+ LMNR+LD N FGSG L+K   IEK + VK WF+ R+I Y++
Sbjct: 57  SENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEE-VKGWFESRRISYYH 115

Query: 260 EEEKGLVFLLFVPTWNLCMD---EDKEKLDLVVDEYEFGDLQGVLLMFSVCHVIIFLQGG 430
           +EEKG++FL +  T    M+   +     D  ++E EFGDLQG+L MF+VCHVII++Q G
Sbjct: 116 DEEKGILFLQYCSTGCPAMEGFLQTDWGFDSALEEREFGDLQGMLFMFAVCHVIIYIQEG 175

Query: 431 SHFDTQV 451
           S FDTQV
Sbjct: 176 SRFDTQV 182


>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
          Length = 1226

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/127 (52%), Positives = 91/127 (71%), Gaps = 3/127 (2%)
 Frame = +2

Query: 80  SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFSIEKGDGVKDWFKFRKICYFY 259
           SE VVV+GFIG+  ++V+ LMNR+LD N FGSG L+K   IEK + VK WF+ R+I Y++
Sbjct: 48  SENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEE-VKGWFESRRISYYH 106

Query: 260 EEEKGLVFLLFVPTWNLCMD---EDKEKLDLVVDEYEFGDLQGVLLMFSVCHVIIFLQGG 430
           +EEKG++FL +  T    M+   +     D  ++E EFGDLQG+L MF+VCHVII++Q G
Sbjct: 107 DEEKGILFLQYCSTGCPAMEGFLQTDWGFDSALEEREFGDLQGMLFMFAVCHVIIYIQEG 166

Query: 431 SHFDTQV 451
           S FDTQV
Sbjct: 167 SRFDTQV 173


>ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis]
           gi|223537031|gb|EEF38667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1233

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 16/136 (11%)
 Frame = +2

Query: 83  EGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFSIEKGDGVKDWFKFRKICYFYE 262
           +GV+V+GFI  N +  +QL+NRVLD NVFGSG LDK  SI+K + +KDWFK+R+I Y+++
Sbjct: 43  DGVIVVGFISHNPDHSSQLINRVLDSNVFGSGHLDKLLSIDK-EELKDWFKWRRISYYHD 101

Query: 263 EEKGLVFLLFVPTWNLCMDEDK-----EKLDLVVDEYEFGDLQGVLLMFS---------- 397
           EEKG +FL F       +         + LD V++E EF DLQG+L MFS          
Sbjct: 102 EEKGFLFLQFCSIRCPVVHGSSRSGLLQDLDSVLEENEFEDLQGLLFMFSIFQRTAQLAM 161

Query: 398 -VCHVIIFLQGGSHFD 442
            VCHVII++Q G  FD
Sbjct: 162 QVCHVIIYIQEGLRFD 177


>emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera]
          Length = 177

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/110 (48%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
 Frame = +2

Query: 80  SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFSIEKGDGVKDWFKFRKICYFY 259
           SE VVV+GFIG+  ++V+ LMNR+LD N FGSG L+K   IEK + VK WF+ R+I Y++
Sbjct: 48  SENVVVVGFIGRRPDDVSHLMNRLLDLNAFGSGNLEKGLCIEK-EEVKGWFEGRRISYYH 106

Query: 260 EEEKGLVFLLFVPTWNLCMD---EDKEKLDLVVDEYEFGDLQGVLLMFSV 400
           +EEKG++FL +  T    M+   +     D  ++E EFGDLQG+L MF++
Sbjct: 107 DEEKGILFLQYCSTGCPAMEGFLQTDWGFDSALEEREFGDLQGMLFMFAI 156


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