BLASTX nr result

ID: Coptis24_contig00000178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000178
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...   155   1e-35
ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002511034.1| ankyrin repeat-containing protein, putative ...   149   6e-34
ref|XP_003635081.1| PREDICTED: uncharacterized protein LOC100852...   146   5e-33
ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein...   144   1e-32

>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At2g01680-like [Vitis vinifera]
          Length = 450

 Score =  155 bits (391), Expect = 1e-35
 Identities = 85/200 (42%), Positives = 133/200 (66%), Gaps = 4/200 (2%)
 Frame = -1

Query: 614 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 435
           M+ R+L+AA++G+ E + +LLRE+P +L T AL+S E+ LHI+S+ GHVDF +++++L+ 
Sbjct: 1   MDRRLLDAAQAGNVEDLHQLLRENPLILHTTALASAENPLHISSISGHVDFVKELIRLKP 60

Query: 434 SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVIK 255
               ELNQDG+S +H+++ +G+ E+V  LL+F        + C       ++P HCA +K
Sbjct: 61  DFIKELNQDGFSPIHMAAANGHQEVVMELLKFD------WKXCHLEGRDEKTPLHCAAMK 114

Query: 254 GKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKL----LINFI 87
           GK++V+ V+L AC E   ++T Q E  LHLAVKN+Q EA   L+E ++ ++    ++N  
Sbjct: 115 GKVNVVRVILSACKECIEDVTVQKEIALHLAVKNSQYEAVRVLVE-KVREMRREDVLNMK 173

Query: 86  DNEGNNILHLATAGKQYQAR 27
           D  GN ILHLAT  KQ QA+
Sbjct: 174 DEHGNTILHLATWRKQRQAK 193


>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  150 bits (380), Expect = 2e-34
 Identities = 81/198 (40%), Positives = 129/198 (65%), Gaps = 4/198 (2%)
 Frame = -1

Query: 614 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 435
           M+ R+ +A  SG       LL EDP +L   +L+S E+ LH++S+ GH++  R++   + 
Sbjct: 1   MDSRLSDAILSGDIAAFRSLLAEDPLILDRISLNSTENPLHLSSLAGHLEITREVACQKP 60

Query: 434 SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVIK 255
           + A ELNQDG+S +HI+S++G+VE+V  LL  G       +IC+ +   G++P H A +K
Sbjct: 61  AFARELNQDGFSPVHIASSNGHVELVRELLRVG------YDICLLKGKDGKTPLHLAAMK 114

Query: 254 GKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKL----LINFI 87
           G++ +++ L+ ACP+S  E+T   ETVLH+AVK+NQ EA   L+E +I KL    ++N+ 
Sbjct: 115 GRVDIVKELVCACPQSVKEVTICGETVLHVAVKSNQAEAVKVLLE-EIKKLDMMEIVNWK 173

Query: 86  DNEGNNILHLATAGKQYQ 33
           D +GN I+HLAT  KQ++
Sbjct: 174 DKDGNTIMHLATLRKQHE 191


>ref|XP_002511034.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223550149|gb|EEF51636.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 320

 Score =  149 bits (376), Expect = 6e-34
 Identities = 85/199 (42%), Positives = 125/199 (62%), Gaps = 3/199 (1%)
 Frame = -1

Query: 614 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 435
           M+ R+LEAA+SG+   + +LL E+P +L + AL S E+ LHIAS+ GHVDF + +L+L+ 
Sbjct: 1   MDARLLEAAQSGNIVYLHQLLAENPLILLSTALFSSENPLHIASIAGHVDFVKDLLRLKP 60

Query: 434 SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCAVIK 255
             A ELNQDGYS MH+++T G+VEIV  L +      +   +C  R    ++P H A IK
Sbjct: 61  EFAQELNQDGYSPMHMAATIGHVEIVRELAK------VDSRLCRVRGKQKKTPLHLAAIK 114

Query: 254 GKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIE---GQISKLLINFID 84
           G+  V  V+L++CP+   ++T + ET +H AVKNNQ  A   L++   G   + ++N  D
Sbjct: 115 GRAEVTSVMLMSCPDCIEDVTVRGETAVHQAVKNNQFHAVNVLVDWIRGTNREEMLNVKD 174

Query: 83  NEGNNILHLATAGKQYQAR 27
             GN +LHLA   KQ QA+
Sbjct: 175 ELGNTVLHLAAWKKQRQAK 193


>ref|XP_003635081.1| PREDICTED: uncharacterized protein LOC100852638 [Vitis vinifera]
          Length = 460

 Score =  146 bits (368), Expect = 5e-33
 Identities = 76/201 (37%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
 Frame = -1

Query: 614 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 435
           M+  + +AAR G+   +L LL  DP +L     +S ++ LH+A+MFGH+DF +++++ + 
Sbjct: 1   MDPIMFKAARDGNVADLLNLLEGDPLILERLVTASADTPLHVAAMFGHLDFVKEVIKHKS 60

Query: 434 SSA---LELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCA 264
           +      ELNQ GYS +H+++ HG+V++V ML+E      I  E+C  +   G +P HCA
Sbjct: 61  NVVEYVKELNQQGYSPIHLAAAHGHVDVVRMLIE------ISSELCCLKGRDGMTPLHCA 114

Query: 263 VIKGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIE---GQISKLLIN 93
            +KG+   M +L+ A P    E+T++ ET LH+A +NNQ +A   L+E      + ++IN
Sbjct: 115 SVKGRAETMSLLISASPLCVIEVTERGETALHVAARNNQLDALRVLVEWLRRTKALVVIN 174

Query: 92  FIDNEGNNILHLATAGKQYQA 30
             D +GN +LHLA A K +QA
Sbjct: 175 SKDGDGNTVLHLAAARKNHQA 195


>ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 430

 Score =  144 bits (364), Expect = 1e-32
 Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
 Frame = -1

Query: 614 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLHIASMFGHVDFARQILQLQQ 435
           M+  + +AA+ GS E +L+LL  DP +L   A ++ ++ LH+ +M GH+DFA+++L+ + 
Sbjct: 1   MDPLLFKAAKDGSIEALLKLLESDPLILERVATTTADTPLHVVAMLGHLDFAKEVLKYKT 60

Query: 434 SSA---LELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEICVQRNIYGRSPFHCA 264
           +      ELNQ GYS +H+++ +G+V +V MLL       I  E+C  R   G +P H A
Sbjct: 61  NVVEYVKELNQHGYSPIHLAAANGHVNVVEMLL------GISHELCYLRGKGGLTPLHYA 114

Query: 263 VIKGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEG---QISKLLIN 93
            IKG+   + +LL + P    E T++ ET LH+AV+NNQ EA   L+EG     + ++IN
Sbjct: 115 SIKGRADTISLLLSSSPLCVVEETERGETALHIAVRNNQLEALRVLVEGLKRSNNLVIIN 174

Query: 92  FIDNEGNNILHLATAGKQYQ 33
           + D EGN ILHLA A K +Q
Sbjct: 175 WKDREGNTILHLAAARKNHQ 194


Top