BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000172
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...   413   e-113
ref|XP_002519950.1| chlorophyll A/B binding protein, putative [R...   410   e-112
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia...   407   e-111
ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein C...   405   e-111
ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein C...   405   e-111

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  413 bits (1062), Expect = e-113
 Identities = 205/274 (74%), Positives = 217/274 (79%), Gaps = 4/274 (1%)
 Frame = +1

Query: 118 EMLGNPLNFXXXXXXXXXXXXXXXXKIVALFSXXXXXXXXXXX----PADDELSKWYGPD 285
           EMLGNPLNF                K VALFS               PAD+EL+KWYGPD
Sbjct: 17  EMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPD 76

Query: 286 RRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENFSKYQAYELIHARWAMLGAA 465
           RRIFLP+GLLDRSEIP YLTGEVPGDYGYDPFGLSKKPE+F+KYQAYELIHARWAMLGAA
Sbjct: 77  RRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAA 136

Query: 466 GFIIPEAFNKYGAVCGPEAVWFKTGALLLDGNTLSYFGNNIPINXXXXXXXXXXXXGSAE 645
           GFIIPEAFNK+GA CGPEAVWFKTGALLLDGNTL+YFG NIPIN            G AE
Sbjct: 137 GFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLVGGAE 196

Query: 646 YYRLTNSLDFEDTLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVT 825
           YYR+ N LD ED LHPGGPFDPLGLA DPDQAA+LKVKEIKNGRLAMFAMLGFFIQAYVT
Sbjct: 197 YYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVT 256

Query: 826 GEGPVENLSAHLSDPFANNLLTVLQGSVERIPTL 927
           GEGPVENL+AHLSDPF NNLLTV+ G+ ER PTL
Sbjct: 257 GEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 290


>ref|XP_002519950.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223540996|gb|EEF42554.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 292

 Score =  410 bits (1053), Expect = e-112
 Identities = 206/276 (74%), Positives = 217/276 (78%), Gaps = 6/276 (2%)
 Frame = +1

Query: 118 EMLGNPLNFXXXXXXXXXXXXXXXX-KIVALFSXXXXXXXXXXXPA-----DDELSKWYG 279
           EMLGNPLNF                 K VALFS           PA     DDEL+KWYG
Sbjct: 17  EMLGNPLNFSGATRSAAPTSSTPSTLKTVALFSKKKAAPPPKAKPAAVSPVDDELAKWYG 76

Query: 280 PDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENFSKYQAYELIHARWAMLG 459
           PDRRIFLP+GLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPE+F+KYQAYELIHARWAMLG
Sbjct: 77  PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLG 136

Query: 460 AAGFIIPEAFNKYGAVCGPEAVWFKTGALLLDGNTLSYFGNNIPINXXXXXXXXXXXXGS 639
           AAGFI+PEAFNK+GA CGPEAVWFKTGALLLDG TL+YFGN+IPIN            G 
Sbjct: 137 AAGFIVPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGNSIPINLVVAVIAEVVLLGG 196

Query: 640 AEYYRLTNSLDFEDTLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAY 819
           AEYYR+ N LD ED LHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGF+ QAY
Sbjct: 197 AEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFYFQAY 256

Query: 820 VTGEGPVENLSAHLSDPFANNLLTVLQGSVERIPTL 927
           VTGEGPVENL+ HLSDPF NNLLTVL GS ER PTL
Sbjct: 257 VTGEGPVENLAKHLSDPFGNNLLTVLAGSAERAPTL 292


>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
          Length = 285

 Score =  407 bits (1046), Expect = e-111
 Identities = 203/275 (73%), Positives = 218/275 (79%), Gaps = 5/275 (1%)
 Frame = +1

Query: 118 EMLGNPLNFXXXXXXXXXXXXXXXX-KIVALF----SXXXXXXXXXXXPADDELSKWYGP 282
           EMLG+P+ F                 K VALF    +           PAD+EL+KWYGP
Sbjct: 11  EMLGSPVKFSGVARPAAPTPSSPATFKTVALFKKKAAAAPAKKAVAIAPADEELAKWYGP 70

Query: 283 DRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENFSKYQAYELIHARWAMLGA 462
           DRRIFLPDGLLDRSEIPEYL GEVPGDYGYDPFGLSKKPE+F+KYQAYELIHARWAMLGA
Sbjct: 71  DRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGA 130

Query: 463 AGFIIPEAFNKYGAVCGPEAVWFKTGALLLDGNTLSYFGNNIPINXXXXXXXXXXXXGSA 642
           AGF+IPEAFNK+GA CGPEAVWFKTGALLLDGNTL+YFG NIPIN            G A
Sbjct: 131 AGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVVAEVVLLGGA 190

Query: 643 EYYRLTNSLDFEDTLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYV 822
           EYYR+TN LD ED LHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYV
Sbjct: 191 EYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYV 250

Query: 823 TGEGPVENLSAHLSDPFANNLLTVLQGSVERIPTL 927
           TG+GPVENL+AHLSDPF NNLLTV+ G+ ER PTL
Sbjct: 251 TGKGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 285


>ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Glycine max]
          Length = 289

 Score =  405 bits (1042), Expect = e-111
 Identities = 201/273 (73%), Positives = 214/273 (78%), Gaps = 3/273 (1%)
 Frame = +1

Query: 118 EMLGNPLNFXXXXXXXXXXXXXXXXKIVALFSXXXXXXXXXXX---PADDELSKWYGPDR 288
           EMLGNP+N                 K VALFS              PA+DEL+KWYGPDR
Sbjct: 17  EMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPDR 76

Query: 289 RIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENFSKYQAYELIHARWAMLGAAG 468
           RIFLP+GLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPE+FSKYQA+ELIHARWAMLGAAG
Sbjct: 77  RIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAG 136

Query: 469 FIIPEAFNKYGAVCGPEAVWFKTGALLLDGNTLSYFGNNIPINXXXXXXXXXXXXGSAEY 648
           FIIPEAFNKYGA CGPEAVWFKTGALLLDG TL+YFG  IPIN            G AEY
Sbjct: 137 FIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGAEY 196

Query: 649 YRLTNSLDFEDTLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTG 828
           YR+ N L+FED LHPGGPFDPLGLA DPDQAA+LKVKEIKNGRLAMFAMLGF+ QAYVTG
Sbjct: 197 YRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTG 256

Query: 829 EGPVENLSAHLSDPFANNLLTVLQGSVERIPTL 927
           EGPVENL+ HLSDPF NNLLTV+ GS ER PTL
Sbjct: 257 EGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 289


>ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Glycine max]
          Length = 291

 Score =  405 bits (1042), Expect = e-111
 Identities = 201/275 (73%), Positives = 215/275 (78%), Gaps = 5/275 (1%)
 Frame = +1

Query: 118 EMLGNPLNFXXXXXXXXXXXXXXXXKIVALFSXXXXXXXXXXX-----PADDELSKWYGP 282
           EMLGNP+NF                K VALFS                PA+DEL+KWYGP
Sbjct: 17  EMLGNPINFSGATRPAPSASSPASFKTVALFSKKKATPTPPKKAAAAAPANDELAKWYGP 76

Query: 283 DRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENFSKYQAYELIHARWAMLGA 462
           DRRIFLP+GLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPE+F+KYQA+ELIHARWAMLGA
Sbjct: 77  DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGA 136

Query: 463 AGFIIPEAFNKYGAVCGPEAVWFKTGALLLDGNTLSYFGNNIPINXXXXXXXXXXXXGSA 642
           AGFIIPEAFNKYGA CGPEAVWFKTGALLLDG TL+YFG  IPIN            G A
Sbjct: 137 AGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGA 196

Query: 643 EYYRLTNSLDFEDTLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYV 822
           EYYR+ N L+FED LHPGGPFDPLGLA DPDQAA+LKVKEIKNGRLAMFAMLGF+ QAYV
Sbjct: 197 EYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYV 256

Query: 823 TGEGPVENLSAHLSDPFANNLLTVLQGSVERIPTL 927
           TGEGPVENL+ HLSDPF NNLLTV+ GS ER PTL
Sbjct: 257 TGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 291