BLASTX nr result

ID: Coptis24_contig00000166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000166
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47838.1| unknown [Medicago truncatula]                          296   4e-78
gb|AFR23349.1| eukaryotic translation initiation factor 5A [Arac...   294   2e-77
ref|NP_001237458.1| eukaryotic translation initiation factor 5A3...   292   8e-77
gb|AFC01198.1| eukaryotic translation initiation factor [Ammopip...   291   1e-76
gb|ACJ84199.1| unknown [Medicago truncatula]                          291   1e-76

>gb|AFK47838.1| unknown [Medicago truncatula]
          Length = 160

 Score =  296 bits (758), Expect = 4e-78
 Identities = 146/160 (91%), Positives = 152/160 (95%), Gaps = 1/160 (0%)
 Frame = +2

Query: 29  MSDEEHHFEAKGDAGASKTYPQQAGAIRKGGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 208
           MSDEEHHFE+K DAGASKTYPQQAG IRK GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 209 VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP-E 385
           VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LP +
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 386 EPLLTQITEGFAEGKDLVVTVMSSMGEEQISTLKDIGPKN 505
           + LLTQI EGFAEGKDLVV+VMSSMGEEQI+ LKDIGPKN
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPKN 160


>gb|AFR23349.1| eukaryotic translation initiation factor 5A [Arachis hypogaea]
          Length = 160

 Score =  294 bits (753), Expect = 2e-77
 Identities = 144/160 (90%), Positives = 151/160 (94%), Gaps = 1/160 (0%)
 Frame = +2

Query: 29  MSDEEHHFEAKGDAGASKTYPQQAGAIRKGGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 208
           MSDEEHHFE+K DAGASKTYPQQAG IRK GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 209 VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP-E 385
           V IDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP +
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 386 EPLLTQITEGFAEGKDLVVTVMSSMGEEQISTLKDIGPKN 505
           + LLTQI +GFAEGKDLVV+VMS+MGEEQI  LKDIGPKN
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN 160


>ref|NP_001237458.1| eukaryotic translation initiation factor 5A3 [Glycine max]
           gi|356516830|ref|XP_003527096.1| PREDICTED: eukaryotic
           translation initiation factor 5A-2-like [Glycine max]
           gi|356562868|ref|XP_003549690.1| PREDICTED: eukaryotic
           translation initiation factor 5A-2-like isoform 1
           [Glycine max] gi|356562870|ref|XP_003549691.1|
           PREDICTED: eukaryotic translation initiation factor
           5A-2-like isoform 2 [Glycine max]
           gi|217038832|gb|ACJ76773.1| eukaryotic translation
           initiation factor 5A2 [Glycine max]
           gi|217038834|gb|ACJ76774.1| eukaryotic translation
           initiation factor 5A3 [Glycine max]
          Length = 160

 Score =  292 bits (747), Expect = 8e-77
 Identities = 142/160 (88%), Positives = 151/160 (94%), Gaps = 1/160 (0%)
 Frame = +2

Query: 29  MSDEEHHFEAKGDAGASKTYPQQAGAIRKGGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 208
           MSDEEHHFE+K DAGASKTYPQQAG IRK GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 209 VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP-E 385
           V IDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDGF+SLLTENGNTKDDL+LP +
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120

Query: 386 EPLLTQITEGFAEGKDLVVTVMSSMGEEQISTLKDIGPKN 505
           E LLTQI +GFAEGKDLVV+VMS+MGEEQI  LKDIGPKN
Sbjct: 121 ESLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN 160


>gb|AFC01198.1| eukaryotic translation initiation factor [Ammopiptanthus
           mongolicus]
          Length = 160

 Score =  291 bits (746), Expect = 1e-76
 Identities = 142/160 (88%), Positives = 151/160 (94%), Gaps = 1/160 (0%)
 Frame = +2

Query: 29  MSDEEHHFEAKGDAGASKTYPQQAGAIRKGGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 208
           MSDEEHHFE+K DAGASKTYPQQAG IRK GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 209 VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP-E 385
           V IDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF+SLLTENGNTKDDL+LP +
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD 120

Query: 386 EPLLTQITEGFAEGKDLVVTVMSSMGEEQISTLKDIGPKN 505
           + LLTQI +GFAEGKDLVV+VMS+MGEEQI  LKDIGPKN
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN 160


>gb|ACJ84199.1| unknown [Medicago truncatula]
          Length = 160

 Score =  291 bits (746), Expect = 1e-76
 Identities = 145/160 (90%), Positives = 151/160 (94%), Gaps = 1/160 (0%)
 Frame = +2

Query: 29  MSDEEHHFEAKGDAGASKTYPQQAGAIRKGGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 208
           MSDEEHHFE+K DAGASKTYPQQAG IRK GYIVIK RP KVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPRKVVEVSTSKTGKHGHAKCHF 60

Query: 209 VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP-E 385
           VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LP +
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 386 EPLLTQITEGFAEGKDLVVTVMSSMGEEQISTLKDIGPKN 505
           + LLTQI EGFAEGKDLVV+VMSSMGEEQI+ LKDIGPKN
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPKN 160


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