BLASTX nr result

ID: Coptis24_contig00000161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000161
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635356.1| PREDICTED: uncharacterized protein LOC100854...    67   3e-09
emb|CBI41073.3| unnamed protein product [Vitis vinifera]               67   3e-09
gb|AFK45136.1| unknown [Medicago truncatula]                           65   1e-08
ref|XP_003635355.1| PREDICTED: uncharacterized protein LOC100854...    65   1e-08
ref|XP_003631688.1| PREDICTED: uncharacterized protein LOC100260...    64   2e-08

>ref|XP_003635356.1| PREDICTED: uncharacterized protein LOC100854766 isoform 2 [Vitis
           vinifera]
          Length = 100

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = +2

Query: 143 RRFSISRTFGELGCAQSLMPLHSVVAAARLTSHLTVNARSCCELSQG 283
           RRFS SRT GELGC QSL+PLHS VAAAR+TS L+  +RSC  LSQG
Sbjct: 53  RRFSSSRTRGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQG 99


>emb|CBI41073.3| unnamed protein product [Vitis vinifera]
          Length = 108

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = +2

Query: 143 RRFSISRTFGELGCAQSLMPLHSVVAAARLTSHLTVNARSCCELSQG 283
           RRFS SRT GELGC QSL+PLHS VAAAR+TS L+  +RSC  LSQG
Sbjct: 53  RRFSSSRTRGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQG 99


>gb|AFK45136.1| unknown [Medicago truncatula]
          Length = 90

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +2

Query: 152 SISRTFGELGCAQSLMPLHSVVAAARLTSHLTVNARSCCELSQG 283
           ++ R  G LGC QSLMPLH+  AAARLTSH++V  R+CCELSQG
Sbjct: 46  TVPRALGILGCTQSLMPLHNADAAARLTSHVSVELRACCELSQG 89


>ref|XP_003635355.1| PREDICTED: uncharacterized protein LOC100854766 isoform 1 [Vitis
           vinifera]
          Length = 106

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +2

Query: 143 RRFSISRTFGELGCAQSLMPLHSVVAAARLTSHLTVNARSCCELSQ 280
           RRFS SRT GELGC QSL+PLHS VAAAR+TS L+  +RSC  LSQ
Sbjct: 53  RRFSSSRTRGELGCIQSLLPLHSAVAAARMTSCLSSTSRSCKALSQ 98


>ref|XP_003631688.1| PREDICTED: uncharacterized protein LOC100260985 isoform 2 [Vitis
           vinifera]
          Length = 91

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 149 FSISRTFGELGCAQSLMPLHSVVAAARLTSHLTVNARSCCELSQG 283
           F+  R  GELGC QSL+PLH+V+A+ RLTSHL+V+ R+CCEL  G
Sbjct: 46  FTNPRNLGELGCVQSLLPLHNVMASPRLTSHLSVDVRACCELFHG 90


Top