BLASTX nr result

ID: Coptis24_contig00000154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000154
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36220.1| unknown [Lotus japonicus] gi|418730406|gb|AFX6699...   309   9e-82
ref|NP_564011.1| ubiquitin-conjugating enzyme E2 36 [Arabidopsis...   307   3e-81
ref|XP_002330723.1| predicted protein [Populus trichocarpa] gi|1...   306   4e-81
ref|NP_001241639.1| uncharacterized protein LOC100805631 [Glycin...   306   6e-81
tpg|DAA58173.1| TPA: putative ubiquitin-conjugating enzyme famil...   306   7e-81

>gb|AFK36220.1| unknown [Lotus japonicus] gi|418730406|gb|AFX66994.1|
           ubiquitin-conjugating enzyme E2 36 [Solanum tuberosum]
          Length = 153

 Score =  309 bits (791), Expect = 9e-82
 Identities = 152/153 (99%), Positives = 153/153 (100%)
 Frame = -1

Query: 944 MANNNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 765
           MAN+NLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 764 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 585
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 584 DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA 486
           DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA
Sbjct: 121 DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA 153


>ref|NP_564011.1| ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana]
           gi|225446595|ref|XP_002280480.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 36 isoform 1 [Vitis
           vinifera] gi|297850090|ref|XP_002892926.1| hypothetical
           protein ARALYDRAFT_889082 [Arabidopsis lyrata subsp.
           lyrata] gi|75334547|sp|Q9FZ48.1|UBC36_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 36; AltName:
           Full=Ubiquitin carrier protein 36
           gi|9802775|gb|AAF99844.1|AC051629_11 Putative
           ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
           gi|15450413|gb|AAK96500.1| At1g16890/F17F16.16
           [Arabidopsis thaliana] gi|16974499|gb|AAL31253.1|
           At1g16890/F17F16.16 [Arabidopsis thaliana]
           gi|21555312|gb|AAM63831.1| E2, ubiquitin-conjugating
           enzyme, putative [Arabidopsis thaliana]
           gi|66354480|gb|AAY44875.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|297338768|gb|EFH69185.1|
           hypothetical protein ARALYDRAFT_889082 [Arabidopsis
           lyrata subsp. lyrata] gi|302143419|emb|CBI21980.3|
           unnamed protein product [Vitis vinifera]
           gi|332191395|gb|AEE29516.1| ubiquitin-conjugating enzyme
           E2 36 [Arabidopsis thaliana]
          Length = 153

 Score =  307 bits (787), Expect = 3e-81
 Identities = 151/153 (98%), Positives = 152/153 (99%)
 Frame = -1

Query: 944 MANNNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 765
           MAN+NLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 764 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 585
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 584 DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA 486
           DPLSENIAKHWKSNE EAVETAKEWTRLYASGA
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153


>ref|XP_002330723.1| predicted protein [Populus trichocarpa] gi|118482721|gb|ABK93279.1|
           unknown [Populus trichocarpa]
           gi|118483536|gb|ABK93666.1| unknown [Populus
           trichocarpa] gi|118484632|gb|ABK94188.1| unknown
           [Populus trichocarpa] gi|118484964|gb|ABK94347.1|
           unknown [Populus trichocarpa]
           gi|222872499|gb|EEF09630.1| predicted protein [Populus
           trichocarpa]
          Length = 153

 Score =  306 bits (785), Expect = 4e-81
 Identities = 150/153 (98%), Positives = 153/153 (100%)
 Frame = -1

Query: 944 MANNNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 765
           MAN+NLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 764 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 585
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 584 DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA 486
           DPLSENIAKHWK+NEVEAVETAKEWTRLYASGA
Sbjct: 121 DPLSENIAKHWKTNEVEAVETAKEWTRLYASGA 153


>ref|NP_001241639.1| uncharacterized protein LOC100805631 [Glycine max]
           gi|297839753|ref|XP_002887758.1| ubiquitin-conjugating
           enzyme 1 [Arabidopsis lyrata subsp. lyrata]
           gi|71040675|gb|AAZ20286.1| ubiquitin-conjugating enzyme
           1 [Arachis hypogaea] gi|217075352|gb|ACJ86036.1| unknown
           [Medicago truncatula] gi|255628881|gb|ACU14785.1|
           unknown [Glycine max] gi|255641415|gb|ACU20984.1|
           unknown [Glycine max] gi|297333599|gb|EFH64017.1|
           ubiquitin-conjugating enzyme 1 [Arabidopsis lyrata
           subsp. lyrata] gi|378464294|gb|AFC01194.1|
           ubiquitin-conjugating enzyme [Ammopiptanthus mongolicus]
           gi|388491284|gb|AFK33708.1| unknown [Medicago
           truncatula]
          Length = 153

 Score =  306 bits (784), Expect = 6e-81
 Identities = 150/153 (98%), Positives = 152/153 (99%)
 Frame = -1

Query: 944 MANNNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 765
           MAN+NLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 764 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 585
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 584 DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA 486
           DPLSENIAKHWKSNE EAVETAKEWTRLYASGA
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153


>tpg|DAA58173.1| TPA: putative ubiquitin-conjugating enzyme family [Zea mays]
          Length = 153

 Score =  306 bits (783), Expect = 7e-81
 Identities = 150/153 (98%), Positives = 152/153 (99%)
 Frame = -1

Query: 944 MANNNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 765
           MAN+NLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGP QSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFL 60

Query: 764 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 585
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 584 DPLSENIAKHWKSNEVEAVETAKEWTRLYASGA 486
           DPLS+NIAKHWKSNEVEAVETAKEWTRLYASGA
Sbjct: 121 DPLSDNIAKHWKSNEVEAVETAKEWTRLYASGA 153


Top