BLASTX nr result

ID: Coptis24_contig00000152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000152
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440197.1| hypothetical protein SORBIDRAFT_09g027610 [S...    89   1e-15
ref|XP_004137545.1| PREDICTED: probable serine/threonine-protein...    86   1e-14
ref|XP_003532514.1| PREDICTED: probable receptor-like protein ki...    85   3e-14
tpg|DAA58038.1| TPA: putative WAK receptor-like protein kinase f...    84   6e-14
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    84   6e-14

>ref|XP_002440197.1| hypothetical protein SORBIDRAFT_09g027610 [Sorghum bicolor]
           gi|241945482|gb|EES18627.1| hypothetical protein
           SORBIDRAFT_09g027610 [Sorghum bicolor]
          Length = 959

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 66/233 (28%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
 Frame = +1

Query: 301 GYPGLVLKC--LNSRLVISISNHFYHVRDINYNSQVVNIVDVDILDE----PDCPQPRTN 462
           GYPG+ + C     R  + + +  Y V  I+Y+   V + D D+L       DCP+   N
Sbjct: 76  GYPGMAIACDEAGGRATLKLKSDNYTVLGIDYDKHTVTVADADVLAAGDGGDDCPRVAHN 135

Query: 463 VSLQSTPFLRAVITSESNLPYDSSESNLLYDNMTFFYNCTNNTQNVEQLIP---CLDKYN 633
           V++    +L    T+               DN+ FFY+C   +     L P    L   N
Sbjct: 136 VTVPRETWLNLSDTAN--------------DNLVFFYDCVFTSSETTTLPPPASVLPPIN 181

Query: 634 ----NNNTNLRSYALLEADIPKGFNGYKNCLESVVVPFTNAITFDDSIPVLNRT-----Q 786
                N T  +S+ ++E D+    +  + C + +V P    +   D   +L        Q
Sbjct: 182 CSSFRNPTGAKSFVVVERDMRLQDDWPRECKQPLVAPVLKKLLSPDEDYLLRLNSDGYGQ 241

Query: 787 GLKRGFQLSWSTPTTECQGCENSRGRCQYNNTG-FRRCHCRYDGSFADRNCPQ 942
            LK+GFQL+W      C  CENS G+C YN  G F  C C  DG     +C Q
Sbjct: 242 LLKQGFQLTWDPSAGSCYFCENSGGQCSYNQVGEFIGCLCS-DGRVRSPDCEQ 293


>ref|XP_004137545.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
            [Cucumis sativus]
          Length = 668

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
 Frame = +1

Query: 301  GYPGLVLKCLNSRLVISISNHFYHVRDINYNSQVVNIVDVDILDEP-DCPQPRTNVSLQS 477
            GYP   +KC     V+ IS+  + V DI + ++   +V     D+P  CP P   + L  
Sbjct: 58   GYPDFKIKCSRDYPVLEISDDIFIVEDIFHQTKSFLLVSAAAYDDPHSCPSPSHGIRLDG 117

Query: 478  TPFLRAVITSESNLPYDSSESNLLYDNMTFFYNCTNNTQNVEQLIPCLDKYNNNNTNLRS 657
             PF            + SSE+    +N +FFY+C    ++    + C      NNT   S
Sbjct: 118  KPF------------HFSSEN----ENFSFFYDCPKVYKDYIYELSC-----TNNTTHFS 156

Query: 658  YALLEADIPKGFN-GYKNCLESVVVPFTNAITFD-DSIPVLNRTQGLKRGFQLSWSTPTT 831
            +A    D+ +  N   ++C  SV VP    +T     +  ++  +  KRGF L+W+    
Sbjct: 157  FATFHKDLLEFQNFPLQSCRSSVHVPIRKNLTASVADLREMSYVEIWKRGFFLNWN--AQ 214

Query: 832  ECQGCENSRGRCQYNNTGFRRCHCRYDGSFADRNCPQFDYYLAGHGLTTGVKVIIGVSTG 1011
            +C  CE S G C+  N  F  C C  DG  ++ +C         HG  T  K+IIGV +G
Sbjct: 215  DCSKCEQSGGYCRLENNKF-ACSCS-DGLHSN-SCK--------HGNRTRTKIIIGVCSG 263

Query: 1012 VG 1017
            VG
Sbjct: 264  VG 265


>ref|XP_003532514.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Glycine max]
          Length = 629

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
 Frame = +1

Query: 364  FYHVRDINYNSQVVNIVDVDILDEPDCPQPRTNVSLQSTPFLRAVITSESNLPYDSSESN 543
            +Y+V+DI+Y + ++ +VD D  +   CP+     +L S P          NLP   S  N
Sbjct: 77   YYYVKDIDYANHILKLVDFDTANIT-CPR-----ALHSFPL--------GNLPLSHSPLN 122

Query: 544  LLYDNMTFFYNCTNNTQNVEQLIPCLDKYNNNNTNLRSYALLEADIPKGFNGYKNCLESV 723
                N+ F+YNCT+   +    I CL    N     RS+  L  +  +GF+    C E V
Sbjct: 123  ---SNLNFYYNCTHYPSSGVPPIECLSSGAN-----RSFVFLMGNETEGFD----CQEKV 170

Query: 724  VVP-FTNAITFDDSIPVLNRTQG-LKRGFQLSWSTPTTECQGCENSRGRCQYNNTGFRR- 894
            VV    + IT  D   ++N   G +  GF L W T TT C  CE S G C Y+NT     
Sbjct: 171  VVAVLKDQITSHDDGGLINEFAGAMNEGFLLDWQT-TTNCAECEASNGTCGYSNTRKETL 229

Query: 895  CHCRYDGSFADRNCPQFDYYLAGHGLTTGV-KVIIGVSTGVG 1017
            C C+ DG+     C        G G  TG+ ++IIG+  G G
Sbjct: 230  CFCK-DGTTKSNTCQ------GGGGSRTGLSRLIIGLIIGGG 264


>tpg|DAA58038.1| TPA: putative WAK receptor-like protein kinase family protein [Zea
            mays]
          Length = 693

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
 Frame = +1

Query: 301  GYPGLVLKCLNSRLVI------SISNHFYHVRDINYNSQVVNIVDVDILDEPDCPQPRTN 462
            GYPGL + C++           S + + Y+V DI+Y +  + + D D+LD+  CP+   N
Sbjct: 78   GYPGLAIDCVDDEYPTIQLGGGSSTGYSYNVTDIDYPTSTIYLADPDVLDDASCPRVDHN 137

Query: 463  VSLQSTPFLRAVITSESNLPYDSSESNLLYDNMTFFYNCTNNTQNVEQL-----IPCLDK 627
            V++  +P           L  + S+  + Y  + FF NC+ +  +V        I C   
Sbjct: 138  VTVSPSP----------TLWLNLSDYTVRY--LLFFTNCSVHVLHVPNQSDISPIACASG 185

Query: 628  YNNNNTNLRSYALLEADIPKGFNGYKNCLESVVVPFTNAITFDDSIPVLNRT---QGLKR 798
             + ++ +     ++ +++P      + C +  +VP     T     P+ + +     LK+
Sbjct: 186  SDGDDYSF----VVPSEMPHQLLS-QQCGQVTLVPVLQNATLTPVDPLWSTSGYRDALKQ 240

Query: 799  GFQLSWST--PTTECQGCENSRGRCQYNNTG-FRRCHCRYDGSFADRNCPQFDYYLAGHG 969
            GFQL W +   T  C  CE S G+C YN +G F  C C  DG   D  C         +G
Sbjct: 241  GFQLQWDSDMKTERCDDCERSSGKCAYNTSGEFVACLCA-DGHVTDHGCT--------NG 291

Query: 970  LTTGVKVIIGVSTGVG 1017
              +   VI GV+ G G
Sbjct: 292  PKSKTAVIAGVAAGAG 307


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
 Frame = +1

Query: 301 GYPGLVLKCLNS-RLVISISNHFYHVRDINYNSQVVNIVDVDILDEPDCPQPRTNVSLQS 477
           GYP L L C N    V+ + N  Y+V++INY    + +VD+D++ +  CP+ R N++L  
Sbjct: 62  GYPKLGLSCSNDDEPVLGLPNDSYYVKNINYTDSTITLVDIDVVGQ-TCPRARHNLTL-- 118

Query: 478 TPFLRAVITSESNLPYDSSESNLLYDNMTFFYNCTNNTQNVEQLIPCLDKYNNNNTNLRS 657
                       NLP + ++ NL   N++F++NCT+N  +    +  ++      T  +S
Sbjct: 119 -----------DNLPLNYTDLNL---NLSFYFNCTSNPSSSNTSLFGIECLGVGTT--QS 162

Query: 658 YALLEADIPKGFNGYKNCLESVVVPFTNAITFDDSIPVLNRTQG----LKRGFQLSWSTP 825
           Y ++  D    + G   C++ VV     A      I  +N   G    + +GF L W T 
Sbjct: 163 YVVMTEDDEVDWIG--KCMDHVV-----ATVMRTEITGINLITGFGAAMNQGFVLDWRT- 214

Query: 826 TTECQGCENSRGRCQYNNTGFR-RCHCRYDGSFADRNC 936
             EC  CE S G C YN    +  C C+ DGS  +  C
Sbjct: 215 VKECGACEVSGGFCGYNEIDEQFLCFCQ-DGSAHENQC 251


Top