BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000149
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]   216   8e-54
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...   212   1e-52
gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tub...   205   1e-50
ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...   196   5e-48
ref|XP_002531259.1| RNA binding protein, putative [Ricinus commu...   192   1e-46

>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score =  216 bits (549), Expect = 8e-54
 Identities = 117/181 (64%), Positives = 130/181 (71%)
 Frame = +1

Query: 187 KMGSRLGRRVINFANLPIKLLMPTSFDYIKEIALKTIPSASKIEIKRVLESLYGFEVEEV 366
           KMGSRLGRRVINF NLPIKLLMP+SF  IKEIALKT+PSASKIEIKRVLESLYGFEVE+V
Sbjct: 309 KMGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKV 368

Query: 367 RTLNMDXXXXXXXXXXXXXPDYKKAYVTLKYPLSINPDLYPIRVIEEERKNMNKQSKSSV 546
           RTLNM+             PDYKKAY+TLK PLSI+PDLYPIR+IEEE+KN NKQSKSS+
Sbjct: 369 RTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSI 428

Query: 547 VGDEQEVKSHWLDGSGNKTIKPGKQGNMRYTRDDRKPRGSSRGDRDTGTAKFPWTSMRTP 726
           V +E E KSHWLDG      +P K    R        RG  RG      AKFPW+ MR  
Sbjct: 429 V-EEGEAKSHWLDGKDGDRFRPEKSSAER-------GRG-GRGGAAAAAAKFPWSGMRAS 479

Query: 727 K 729
           +
Sbjct: 480 R 480


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  212 bits (539), Expect = 1e-52
 Identities = 115/180 (63%), Positives = 129/180 (71%)
 Frame = +1

Query: 190 MGSRLGRRVINFANLPIKLLMPTSFDYIKEIALKTIPSASKIEIKRVLESLYGFEVEEVR 369
           MGSRLGRRVINF NLPIKLLMP+SF  IKEIALKT+PSASKIEIKRVLESLYGFEVE+VR
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 370 TLNMDXXXXXXXXXXXXXPDYKKAYVTLKYPLSINPDLYPIRVIEEERKNMNKQSKSSVV 549
           TLNM+             PDYKKAY+TLK PLSI+PDLYPIR+IEEE+KN NKQSKSS+V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 550 GDEQEVKSHWLDGSGNKTIKPGKQGNMRYTRDDRKPRGSSRGDRDTGTAKFPWTSMRTPK 729
            +E E KSHWLDG      +P K    R     R  RG +        AKFPW+ MR  +
Sbjct: 121 -EEGEAKSHWLDGKDGDRFRPEKSSAER----GRGGRGGA-----AAAAKFPWSGMRASR 170


>gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
          Length = 188

 Score =  205 bits (521), Expect = 1e-50
 Identities = 110/184 (59%), Positives = 132/184 (71%), Gaps = 6/184 (3%)
 Frame = +1

Query: 190 MGSRLGRRVINFANLPIKLLMPTSFDYIKEIALKTIPSASKIEIKRVLESLYGFEVEEVR 369
           MGSRLGRRV+NFANLPIKLLMP+SF  I EI+LKTIPSASKIEIKRVLESLYGFEVE+V+
Sbjct: 1   MGSRLGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQ 60

Query: 370 TLNMDXXXXXXXXXXXXXPDYKKAYVTLKYPLSINPDLYPIRVIEEERKNMNKQSKSSVV 549
           TLNMD             PDYKKAYVTL+ PLSI+PDL+PI VI+EE+KNM+K+SKSS+V
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDLFPIGVIQEEKKNMSKKSKSSIV 120

Query: 550 GDEQEVKSHWL----DGSGNKTIKPGKQGNMR--YTRDDRKPRGSSRGDRDTGTAKFPWT 711
            D++  K HWL    DG     ++ G+  + R     D  + RG    D     AKFPW+
Sbjct: 121 EDDEPKKMHWLDEKKDGRNRSEMRFGRGRDHRSGQRSDVGRDRGGEHRDVGAAAAKFPWS 180

Query: 712 SMRT 723
           SMR+
Sbjct: 181 SMRS 184


>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  196 bits (499), Expect = 5e-48
 Identities = 107/178 (60%), Positives = 127/178 (71%)
 Frame = +1

Query: 190 MGSRLGRRVINFANLPIKLLMPTSFDYIKEIALKTIPSASKIEIKRVLESLYGFEVEEVR 369
           MGSRLGRRV++FANLPIKLLMPTSF  I EIALKTIPSASKIEIKRVLESLYGFEV++V+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 370 TLNMDXXXXXXXXXXXXXPDYKKAYVTLKYPLSINPDLYPIRVIEEERKNMNKQSKSSVV 549
           TLNM+             PDYKKAYVTL+ PLSI+PD+YPIR+IEE+++NMNKQSKSS+V
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 550 GDEQEVKSHWLDGSGNKTIKPGKQGNMRYTRDDRKPRGSSRGDRDTGTAKFPWTSMRT 723
            +E E K HWL       IK  K        D  + R     +    + KFPW+SMR+
Sbjct: 121 -EEGEAKKHWLHEKEPVGIKTYKG-----FADRGRRRSGGGAETVEPSTKFPWSSMRS 172


>ref|XP_002531259.1| RNA binding protein, putative [Ricinus communis]
           gi|223529144|gb|EEF31123.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 174

 Score =  192 bits (487), Expect = 1e-46
 Identities = 105/186 (56%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
 Frame = +1

Query: 190 MGSRLGRRVINFANLPIKLLMPTSFDYIKEIALKTIPSASKIEIKRVLESLYGFEVEEVR 369
           M SR+G RV++FANLPIKLLMP +F+ I+E ALKTIPSASKIEIKRVLESLYGFEV++VR
Sbjct: 1   MASRVGGRVVHFANLPIKLLMPKTFNNIEEFALKTIPSASKIEIKRVLESLYGFEVDKVR 60

Query: 370 TLNMDXXXXXXXXXXXXXPDYKKAYVTLKYPLSINPDLYPIRVIEEERKNMNKQSKSSVV 549
           TLNM+             PDYKKAY+TLK PLSI+PDLYP+R+I E+++ MNK+ KSS+V
Sbjct: 61  TLNMEGKKKKRGGFLAAKPDYKKAYITLKNPLSISPDLYPVRIIAEDKERMNKERKSSIV 120

Query: 550 GDEQEVKSHWLDGSGNKTIKPGKQGNMRYTRDDRKPRGSSRGDRD------TGTAKFPWT 711
            D+ E K HWLD          K  N R+  + R    +SRG RD         +KFPWT
Sbjct: 121 -DDGEGKKHWLDDK-------KKMKNERFGNEKR----NSRGGRDFHVENANANSKFPWT 168

Query: 712 SMRTPK 729
           SMRT +
Sbjct: 169 SMRTSR 174