BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000143
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   580   e-163
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   578   e-162
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   571   e-160
ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   564   e-158
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   561   e-157

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  580 bits (1495), Expect = e-163
 Identities = 293/400 (73%), Positives = 318/400 (79%)
 Frame = -1

Query: 1661 RPLVTVQKLEGEMETDGSNSIPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1482
            RPLVTVQ L+ +M TDG N++PLPDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 6    RPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQ 65

Query: 1481 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1302
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1301 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAE 1122
            Y                ARGH+IE+VPE+PLV+GDSAE VEKTS+AI +LKQ+GAY DAE
Sbjct: 126  YAVVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAE 185

Query: 1121 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 942
            KAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANVERLNLLKL
Sbjct: 186  KAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLKL 245

Query: 941  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 762
            APGGHLGRFIIWTKSA EK+DSIYGSFDK SEKKKGY+LPR+KMVNADL+RIINSDEVQS
Sbjct: 246  APGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDEVQS 305

Query: 761  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 582
            VVRPI  EVKRAPM               PYAKT                          
Sbjct: 306  VVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRAQ 365

Query: 581  IPXXXXXXXXXXXXAWYKTMISDSDYSEFDNFSKWLGISQ 462
            IP            AWY+TMISDSDY+EFDNFSKWLG+SQ
Sbjct: 366  IPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  578 bits (1489), Expect = e-162
 Identities = 292/400 (73%), Positives = 318/400 (79%)
 Frame = -1

Query: 1661 RPLVTVQKLEGEMETDGSNSIPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1482
            RPLVTVQ L+ +M TDG N++PLPDVMKASIRPDIV +VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 7    RPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRRAGHQ 66

Query: 1481 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1302
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 67   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 126

Query: 1301 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAE 1122
            Y                ARGH+IE+VPE+PLV+GDSAE VEKTS+AI +LKQ+GAY DAE
Sbjct: 127  YAVVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAE 186

Query: 1121 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 942
            KAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANV+RLNLLKL
Sbjct: 187  KAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKL 246

Query: 941  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 762
            APGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPRSKMVNADL+RIINSDEVQS
Sbjct: 247  APGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIINSDEVQS 306

Query: 761  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 582
            VVRPI  EVKRAPM               PYAKT                        K 
Sbjct: 307  VVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKLDKKRKQ 366

Query: 581  IPXXXXXXXXXXXXAWYKTMISDSDYSEFDNFSKWLGISQ 462
            IP            AWY+TMISDSDY+EFDNFSKWLG+SQ
Sbjct: 367  IPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  571 bits (1471), Expect = e-160
 Identities = 288/400 (72%), Positives = 315/400 (78%)
 Frame = -1

Query: 1661 RPLVTVQKLEGEMETDGSNSIPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1482
            RPLVTVQ L+G+M TD S ++P+PDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 6    RPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQ 65

Query: 1481 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1302
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1301 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAE 1122
            Y                ARGH+IE+VPE+PLVV DSAEGVEKT  AIKVLKQIGA+ DAE
Sbjct: 126  YAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAEGVEKTKEAIKVLKQIGAFPDAE 185

Query: 1121 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 942
            KAKDS  IRPGKGKMRNRRY+S++GPL+VYGTEG+K VKAFRN+PGVEVANVERLNLLKL
Sbjct: 186  KAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNLLKL 245

Query: 941  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 762
            APGGHLGRF+IWTKSAFEKLDSIYGSFDK SEKKKGY+LPRSKMVN+DLSRIINSDEVQS
Sbjct: 246  APGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSDEVQS 305

Query: 761  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 582
            VVRPI  +VKRA +               PYAKT                        K 
Sbjct: 306  VVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDKKRKT 365

Query: 581  IPXXXXXXXXXXXXAWYKTMISDSDYSEFDNFSKWLGISQ 462
            +             AWY TM+SDSDY+EFDNFSKWLG+SQ
Sbjct: 366  VSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405


>ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449519122|ref|XP_004166584.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  564 bits (1454), Expect = e-158
 Identities = 283/400 (70%), Positives = 315/400 (78%)
 Frame = -1

Query: 1661 RPLVTVQKLEGEMETDGSNSIPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1482
            RPLV VQ LEG+M TD S ++PLPDVMKASIRPDIV++VHSNISKNSRQPYAVS+RAGHQ
Sbjct: 6    RPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQ 65

Query: 1481 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1302
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1301 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAE 1122
            Y                ARGH+IE+VPE+PLV+ DSAEG+EKTSSAIKVLKQ+GA  DAE
Sbjct: 126  YAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGALPDAE 185

Query: 1121 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 942
            KAKDS  IR GKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPG+++ NVERLNLLKL
Sbjct: 186  KAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNLLKL 245

Query: 941  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 762
            APGGHLGRF+IWTK+AFEKLDSIYGSF+K+SEKKKGYVLPRSKMVNADL+RIINSDEVQS
Sbjct: 246  APGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSDEVQS 305

Query: 761  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 582
            VV+PI   VKR  +               PYAKT                         +
Sbjct: 306  VVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRGI 365

Query: 581  IPXXXXXXXXXXXXAWYKTMISDSDYSEFDNFSKWLGISQ 462
            IP            AWY+TMISDSDY+EFDNFSKWLG+SQ
Sbjct: 366  IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  561 bits (1445), Expect = e-157
 Identities = 282/400 (70%), Positives = 312/400 (78%)
 Frame = -1

Query: 1661 RPLVTVQKLEGEMETDGSNSIPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQ 1482
            RPLVTVQ L+ +M TD S ++P+PDVMK+SIRPDIVN+VHSNISKNSRQPYAVSRRAGHQ
Sbjct: 6    RPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSRRAGHQ 65

Query: 1481 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKR 1302
            TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKR
Sbjct: 66   TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125

Query: 1301 YXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAE 1122
            Y                ARGH+IE+VPE+PLVV DSAE VEKT  AIKVLKQIGA+ DAE
Sbjct: 126  YAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAESVEKTKEAIKVLKQIGAFPDAE 185

Query: 1121 KAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKL 942
            KAKDS  IRPGKGKMRNRRY+S++GPLIVYGTEG+K VKAFRN+PGVEVANVERLNLLKL
Sbjct: 186  KAKDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNLLKL 245

Query: 941  APGGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQS 762
            APGGHLGRF++WTKSAFEKLDSIYGSFDK SEKKKGY+LPR KMVN+DL+RIINSDEVQS
Sbjct: 246  APGGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNSDLARIINSDEVQS 305

Query: 761  VVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKV 582
            VVRPI  +VK+A +               PYAKT                        K 
Sbjct: 306  VVRPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKKRKT 365

Query: 581  IPXXXXXXXXXXXXAWYKTMISDSDYSEFDNFSKWLGISQ 462
            +             AWY TM+SDSDY+EFDNFSKWLG+SQ
Sbjct: 366  VSKEEASAIKSAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405