BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000142
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   584   e-164
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   583   e-164
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   577   e-162
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   573   e-161
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   567   e-159

>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  584 bits (1505), Expect = e-164
 Identities = 298/406 (73%), Positives = 320/406 (78%)
 Frame = -1

Query: 1513 MATAAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVS 1334
            MA AAARPLVTVQ L+ +M TDG N++PLPDVMKASIRPDIV +VHSNISKNSRQPYAVS
Sbjct: 1    MAAAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVS 60

Query: 1333 RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKI 1154
            RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKI
Sbjct: 61   RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 1153 NMNQKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIG 974
            N+NQKRY                ARGH+IE+VPE+PLV+GDSAE VEKTSAAI +LKQ+G
Sbjct: 121  NVNQKRYAVVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVG 180

Query: 973  AYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVER 794
            AY DAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANV+R
Sbjct: 181  AYPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDR 240

Query: 793  LNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIIN 614
            LNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPRSKMVNADL+RIIN
Sbjct: 241  LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIIN 300

Query: 613  SDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXX 434
            SDEVQSVVRPI  EVKRAPM               PYAKT                    
Sbjct: 301  SDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKL 360

Query: 433  XXXXXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 296
                                AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361  DKKRKQIPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406


>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  583 bits (1502), Expect = e-164
 Identities = 298/403 (73%), Positives = 319/403 (79%)
 Frame = -1

Query: 1504 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1325
            AAARPLVTVQ L+ +M TDG N++PLPDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRA
Sbjct: 3    AAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRA 62

Query: 1324 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKINMN 1145
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1144 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 965
            QKRY                ARGH+IE+VPE+PLV+GDSAE VEKTSAAI +LKQ+GAY 
Sbjct: 123  QKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYP 182

Query: 964  DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 785
            DAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANVERLNL
Sbjct: 183  DAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNL 242

Query: 784  LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 605
            LKLAPGGHLGRFIIWTKSA EK+DSIYGSFDK SEKKKGY+LPR+KMVNADL+RIINSDE
Sbjct: 243  LKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDE 302

Query: 604  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 425
            VQSVVRPI  EVKRAPM               PYAKT                       
Sbjct: 303  VQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKK 362

Query: 424  XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 296
                             AWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 363  RAQIPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  577 bits (1487), Expect = e-162
 Identities = 293/403 (72%), Positives = 317/403 (78%)
 Frame = -1

Query: 1504 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1325
            AAARPLVTVQ L+G+M TD S ++P+PDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRA
Sbjct: 3    AAARPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRA 62

Query: 1324 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKINMN 1145
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1144 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 965
            QKRY                ARGH+IE+VPE+PLVV DSAEGVEKT  AIKVLKQIGA+ 
Sbjct: 123  QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAEGVEKTKEAIKVLKQIGAFP 182

Query: 964  DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 785
            DAEKAKDS  IRPGKGKMRNRRY+S++GPL+VYGTEG+K VKAFRN+PGVEVANVERLNL
Sbjct: 183  DAEKAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNL 242

Query: 784  LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 605
            LKLAPGGHLGRF+IWTKSAFEKLDSIYGSFDKPSEKKKGY+LPRSKMVN+DLSRIINSDE
Sbjct: 243  LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSDE 302

Query: 604  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 425
            VQSVVRPI  +VKRA +               PYAKT                       
Sbjct: 303  VQSVVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDKK 362

Query: 424  XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 296
                             AWY TM+SDSDYTEFDNFSKWLGVSQ
Sbjct: 363  RKTVSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  573 bits (1477), Expect = e-161
 Identities = 293/403 (72%), Positives = 317/403 (78%)
 Frame = -1

Query: 1504 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1325
            AAARPLV+VQ LEG+M TD + ++PLPDVMKASIRPDIV++VHSNISKNSRQPYAVS+RA
Sbjct: 3    AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 1324 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKINMN 1145
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1144 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 965
            QKRY                ARGH+IE VPE+PLVV DSAEGVEKTSAAIKVLKQ+GA+ 
Sbjct: 123  QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 964  DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 785
            DAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVE+ANVERLNL
Sbjct: 183  DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 784  LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 605
            LKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243  LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 604  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 425
            VQSVV+PI   VKR  +               PYAKT                       
Sbjct: 303  VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 424  XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 296
                             AWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363  RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  567 bits (1461), Expect = e-159
 Identities = 287/403 (71%), Positives = 314/403 (77%)
 Frame = -1

Query: 1504 AAARPLVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRA 1325
            AAARPLVTVQ L+ +M TD S ++P+PDVMK+SIRPDIVN+VHSNISKNSRQPYAVSRRA
Sbjct: 3    AAARPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSRRA 62

Query: 1324 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKINMN 1145
            GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+N
Sbjct: 63   GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 1144 QKRYXXXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEGVEKTSAAIKVLKQIGAYA 965
            QKRY                ARGH+IE+VPE+PLVV DSAE VEKT  AIKVLKQIGA+ 
Sbjct: 123  QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAESVEKTKEAIKVLKQIGAFP 182

Query: 964  DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 785
            DAEKAKDS  IRPGKGKMRNRRY+S++GPLIVYGTEG+K VKAFRN+PGVEVANVERLNL
Sbjct: 183  DAEKAKDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNL 242

Query: 784  LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 605
            LKLAPGGHLGRF++WTKSAFEKLDSIYGSFDKPSEKKKGY+LPR KMVN+DL+RIINSDE
Sbjct: 243  LKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNSDLARIINSDE 302

Query: 604  VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 425
            VQSVVRPI  +VK+A +               PYAKT                       
Sbjct: 303  VQSVVRPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKK 362

Query: 424  XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 296
                             AWY TM+SDSDYTEFDNFSKWLGVSQ
Sbjct: 363  RKTVSKEEASAIKSAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405