BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000138
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   168   7e-40
gb|AFK45150.1| unknown [Lotus japonicus]                              163   2e-38
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   163   3e-38
ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
gb|ABK22541.1| unknown [Picea sitchensis]                             162   5e-38

>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  168 bits (426), Expect = 7e-40
 Identities = 79/87 (90%), Positives = 85/87 (97%)
 Frame = -2

Query: 596 ASVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLG 417
           A+VP+NPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYIDG+FTGNLG
Sbjct: 2   ATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLG 61

Query: 416 EILIRCNNVLYLRGVPEDEDITEADRD 336
           EILIRCNNVLYLRGVPEDE+I EADRD
Sbjct: 62  EILIRCNNVLYLRGVPEDEEIEEADRD 88


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  163 bits (413), Expect = 2e-38
 Identities = 76/87 (87%), Positives = 83/87 (95%)
 Frame = -2

Query: 596 ASVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLG 417
           A++PVNPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61

Query: 416 EILIRCNNVLYLRGVPEDEDITEADRD 336
           EILIRCNNVLYLRGVPEDE+I +A  D
Sbjct: 62  EILIRCNNVLYLRGVPEDEEIEDAPED 88


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
          Length = 88

 Score =  163 bits (412), Expect = 3e-38
 Identities = 76/87 (87%), Positives = 83/87 (95%)
 Frame = -2

Query: 596 ASVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLG 417
           A++PVNPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61

Query: 416 EILIRCNNVLYLRGVPEDEDITEADRD 336
           EILIRCNNVLYLRGVPEDE+I +A  D
Sbjct: 62  EILIRCNNVLYLRGVPEDEEIEDAAED 88


>ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|222866485|gb|EEF03616.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  162 bits (410), Expect = 5e-38
 Identities = 76/87 (87%), Positives = 82/87 (94%)
 Frame = -2

Query: 596 ASVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLG 417
           A+VPVNPKPFLN LTGK V+VKLKWGMEYKG+L SVDSYMNLQL NTEEYIDG+FTGNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQFTGNLG 61

Query: 416 EILIRCNNVLYLRGVPEDEDITEADRD 336
           EILIRCNNVLYLRGVPEDEDI +A+RD
Sbjct: 62  EILIRCNNVLYLRGVPEDEDIEDAERD 88


>gb|ABK22541.1| unknown [Picea sitchensis]
          Length = 84

 Score =  162 bits (410), Expect = 5e-38
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = -2

Query: 596 ASVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLG 417
           A+VPVNPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDG+FTGNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG 61

Query: 416 EILIRCNNVLYLRGVPEDEDITE 348
           E+LIRCNNVLYLRGVPEDEDI E
Sbjct: 62  EVLIRCNNVLYLRGVPEDEDIEE 84