BLASTX nr result
ID: Coptis24_contig00000133
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000133 (631 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1... 184 2e-44 ref|XP_002526939.1| cystinosin, putative [Ricinus communis] gi|2... 181 8e-44 ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|s... 175 7e-42 ref|XP_002268329.1| PREDICTED: cystinosin homolog [Vitis vinifer... 174 2e-41 ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis l... 173 2e-41 >ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1| unknown [Populus trichocarpa] gi|222867000|gb|EEF04131.1| predicted protein [Populus trichocarpa] Length = 274 Score = 184 bits (466), Expect = 2e-44 Identities = 108/196 (55%), Positives = 131/196 (66%), Gaps = 9/196 (4%) Frame = -1 Query: 610 MIPVATNDVAFSIHAILLIGITLIPVLIYDRGSQRVSMTCIAISCVVWISATVCVRGLAN 431 MIPVA NDVAFSIHA+LL ITL ++IYDRG+Q+VS IA CVVW+ A VC Sbjct: 85 MIPVAANDVAFSIHAVLLTAITLFQIVIYDRGNQKVSKISIATVCVVWLVAAVCF----- 139 Query: 430 PILALANLSV*YNTSLHDSHQIHSPG--------HHVSRKSTIGWSIGNILLDLLEGMTN 275 +AL + S + S+ +S Q+ + RKST G+SIGNILLD L G+TN Sbjct: 140 -FIALPSHSWLWLISIFNSIQVFMTVIKYIPQVIMNFMRKSTDGFSIGNILLDCLGGVTN 198 Query: 274 YRQMAMQSIDQGSWVNFNGNIGKTLLSLVSIFFDLLFIVQH*FLYPSKKEKVSPEIDWES 95 Y QMA+QSIDQ SWVNF GNIGKTLLSLVSIFFDL+F+ QH LYP K V P+++ E Sbjct: 199 YAQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMCQHYILYPENK-AVPPKLNKEG 257 Query: 94 TAPLIK-SSQPLQSEN 50 T PLI+ S +P EN Sbjct: 258 TEPLIRFSEEPAAPEN 273 >ref|XP_002526939.1| cystinosin, putative [Ricinus communis] gi|223533691|gb|EEF35426.1| cystinosin, putative [Ricinus communis] Length = 244 Score = 181 bits (460), Expect = 8e-44 Identities = 104/184 (56%), Positives = 126/184 (68%), Gaps = 10/184 (5%) Frame = -1 Query: 610 MIPVATNDVAFSIHAILLIGITLIPVLIYDRGSQRVSMTCIAISCVVWISATVCVRGLAN 431 MIPVA NDVAFSIHA+LL ITL + IY+RG Q+VS IAI C+VW++A C+ Sbjct: 57 MIPVAVNDVAFSIHAVLLTAITLFQIAIYERGRQKVSKIAIAIVCIVWVAAAACL----- 111 Query: 430 PILALANLSV*YNTSLHDSHQIHSPG--------HHVSRKSTIGWSIGNILLDLLEGMTN 275 +AL + S + S+ S Q+ + G + RKST G+SIGNILLD L G+TN Sbjct: 112 -FVALHHHSWLWLISVFSSIQVCTTGIKYIPQAIMNFMRKSTDGFSIGNILLDFLGGVTN 170 Query: 274 YRQMAMQSIDQGSWVNFNGNIGKTLLSLVSIFFDLLFIVQH*FLYPSKKEK--VSPEIDW 101 Y QMA QSIDQ SWVNF GNIGKTLLSLVSIFFDLLF+ QH LYP+KK+K SPE + Sbjct: 171 YAQMAAQSIDQHSWVNFYGNIGKTLLSLVSIFFDLLFMFQHYILYPAKKKKENASPETER 230 Query: 100 ESTA 89 +S A Sbjct: 231 DSAA 234 >ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|sp|P57758.1|CTNS_ARATH RecName: Full=Cystinosin homolog gi|9758095|dbj|BAB08539.1| unnamed protein product [Arabidopsis thaliana] gi|15529266|gb|AAK97727.1| AT5g40670/MNF13_190 [Arabidopsis thaliana] gi|16974419|gb|AAL31135.1| AT5g40670/MNF13_190 [Arabidopsis thaliana] gi|332007197|gb|AED94580.1| cystinosin [Arabidopsis thaliana] Length = 270 Score = 175 bits (443), Expect = 7e-42 Identities = 97/188 (51%), Positives = 119/188 (63%), Gaps = 8/188 (4%) Frame = -1 Query: 610 MIPVATNDVAFSIHAILLIGITLIPVLIYDRGSQRVSMTCIAISCVVWISATVCVRGLAN 431 MIPVA NDVAFSIHA+++ +TL + IY+RG Q+VS I I VVW A +C Sbjct: 85 MIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICF----- 139 Query: 430 PILALANLSV*YNTSLHDSHQIH--------SPGHHVSRKSTIGWSIGNILLDLLEGMTN 275 +AL S + S+ +S Q+ + +RKST+GWSIGNILLD G+ N Sbjct: 140 -FIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLAN 198 Query: 274 YRQMAMQSIDQGSWVNFNGNIGKTLLSLVSIFFDLLFIVQH*FLYPSKKEKVSPEIDWES 95 Y QM +QSIDQ SW NF GN+GKTLLSL+SIFFD+LF+ QH LYP KK SPE ES Sbjct: 199 YLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEES 258 Query: 94 TAPLIKSS 71 PLI SS Sbjct: 259 NEPLIDSS 266 >ref|XP_002268329.1| PREDICTED: cystinosin homolog [Vitis vinifera] gi|296081321|emb|CBI17703.3| unnamed protein product [Vitis vinifera] Length = 274 Score = 174 bits (440), Expect = 2e-41 Identities = 102/190 (53%), Positives = 123/190 (64%), Gaps = 3/190 (1%) Frame = -1 Query: 610 MIPVATNDVAFSIHAILLIGITLIPVLIYDRGSQRVSMTCIAISCVVWISATVCVRGLAN 431 MIPVA NDVAFSIHA++LI T + IY+RG+Q+VS I I W+SA VCV +A Sbjct: 85 MIPVAANDVAFSIHAVVLIAFTWFQIAIYERGTQKVSKISIGIVSAAWLSAAVCVI-IAW 143 Query: 430 PILALANLSV*YNT---SLHDSHQIHSPGHHVSRKSTIGWSIGNILLDLLEGMTNYRQMA 260 P + L +NT +L I + RKST G+SIGNIL DL G+ NY QM Sbjct: 144 PSHSWLWLISVFNTIQVALATIKYIPQAFMNFRRKSTDGFSIGNILFDLSGGVANYAQMT 203 Query: 259 MQSIDQGSWVNFNGNIGKTLLSLVSIFFDLLFIVQH*FLYPSKKEKVSPEIDWESTAPLI 80 +QSI+QGSWVNF GNIGK L+SLVS+FFDL+FI QH LYP KK P++ ES PLI Sbjct: 204 VQSINQGSWVNFYGNIGKLLISLVSVFFDLVFISQHYLLYPGKKVGKCPKLGDESREPLI 263 Query: 79 KSSQPLQSEN 50 KS QSEN Sbjct: 264 KSVDHPQSEN 273 >ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297316523|gb|EFH46946.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata] Length = 270 Score = 173 bits (439), Expect = 2e-41 Identities = 97/188 (51%), Positives = 118/188 (62%), Gaps = 8/188 (4%) Frame = -1 Query: 610 MIPVATNDVAFSIHAILLIGITLIPVLIYDRGSQRVSMTCIAISCVVWISATVCVRGLAN 431 MIPVA NDVAFSIHA+++ +TL + IY+RG Q+VS I I VVW A +C Sbjct: 85 MIPVAANDVAFSIHAVVMTALTLFQIFIYERGPQKVSRLAIGIVVVVWAFAAICF----- 139 Query: 430 PILALANLSV*YNTSLHDSHQIH--------SPGHHVSRKSTIGWSIGNILLDLLEGMTN 275 +AL S + S+ +S Q+ + +RKST+GWSIGNILLD G+ N Sbjct: 140 -FIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLAN 198 Query: 274 YRQMAMQSIDQGSWVNFNGNIGKTLLSLVSIFFDLLFIVQH*FLYPSKKEKVSPEIDWES 95 Y QM +QSIDQ SW NF GNIGKTLLSL+SIFFD+LF+ QH LYP KK S E ES Sbjct: 199 YLQMVIQSIDQNSWKNFYGNIGKTLLSLISIFFDILFMFQHYVLYPEKKASKSLETGEES 258 Query: 94 TAPLIKSS 71 PLI SS Sbjct: 259 NEPLIDSS 266