BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000129
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   112   5e-23
ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group] g...   108   8e-22
ref|XP_003575171.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   108   8e-22
ref|XP_002519364.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare]    107   2e-21

>ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 3-B [Vitis vinifera]
          Length = 70

 Score =  112 bits (281), Expect = 5e-23
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = -1

Query: 558 MGKQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIALVAFGIYLVGEAAYNKFYSSSD 379
           MGK LGPTGEFF+RRDEWRKHPM+  QLRHATPGLGIA+VAF IYLVGEAAYNK Y+ S 
Sbjct: 1   MGKPLGPTGEFFRRRDEWRKHPMLNKQLRHATPGLGIAVVAFSIYLVGEAAYNKLYAPSH 60

Query: 378 SVSH 367
           S SH
Sbjct: 61  SNSH 64


>ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group]
           gi|46390154|dbj|BAD15588.1| unknown protein [Oryza
           sativa Japonica Group] gi|46390350|dbj|BAD15815.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|125539926|gb|EAY86321.1| hypothetical protein
           OsI_07695 [Oryza sativa Indica Group]
           gi|125582543|gb|EAZ23474.1| hypothetical protein
           OsJ_07168 [Oryza sativa Japonica Group]
           gi|215704134|dbj|BAG92974.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765172|dbj|BAG86869.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255671009|dbj|BAH91756.1| Os02g0564200 [Oryza sativa
           Japonica Group]
          Length = 66

 Score =  108 bits (271), Expect = 8e-22
 Identities = 49/64 (76%), Positives = 54/64 (84%)
 Frame = -1

Query: 555 GKQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIALVAFGIYLVGEAAYNKFYSSSDS 376
           GK L  TGEFF+RRD+WR+HPMVGNQLRHATPGLGIA+VAFGIYLVGEAAYN+ Y  S  
Sbjct: 3   GKGLNATGEFFRRRDDWRRHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLYRPSGD 62

Query: 375 VSHH 364
             HH
Sbjct: 63  HHHH 66


>ref|XP_003575171.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 3-B-like isoform 1 [Brachypodium distachyon]
           gi|357149612|ref|XP_003575172.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           3-B-like isoform 2 [Brachypodium distachyon]
          Length = 66

 Score =  108 bits (271), Expect = 8e-22
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = -1

Query: 555 GKQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIALVAFGIYLVGEAAYNKFYSSSDS 376
           GK L  TGEFF+RRDEWR+HPMVGNQLRHATPGLGIA+VAFGIYLVGEAAYN+ Y SS  
Sbjct: 5   GKGLNATGEFFRRRDEWRRHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLYPSSG- 63

Query: 375 VSHH 364
            +HH
Sbjct: 64  -NHH 66


>ref|XP_002519364.1| conserved hypothetical protein [Ricinus communis]
           gi|223541431|gb|EEF42981.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/64 (78%), Positives = 53/64 (82%)
 Frame = -1

Query: 558 MGKQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIALVAFGIYLVGEAAYNKFYSSSD 379
           MGK LG TGEFFKRRDEWRKHPM+ NQ RHATPGLGIALVAFGIYLVGE  Y+K Y+ S 
Sbjct: 1   MGKPLGTTGEFFKRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYDKLYAPSS 60

Query: 378 SVSH 367
           S  H
Sbjct: 61  SHHH 64


>dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 78

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = -1

Query: 555 GKQLGPTGEFFKRRDEWRKHPMVGNQLRHATPGLGIALVAFGIYLVGEAAYNKFYSSSDS 376
           GK L  TGEFF+RRDEWRKHPMVGNQLRHATPGLGIA+VAFGIYLVGEAAYN+ Y  +  
Sbjct: 16  GKGLNATGEFFRRRDEWRKHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYNRLYRPAGD 75

Query: 375 VSHH 364
            +HH
Sbjct: 76  -NHH 78