BLASTX nr result

ID: Coptis24_contig00000128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000128
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633611.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ...   117   1e-24
ref|XP_002275765.1| PREDICTED: GTP-binding protein SAR1A [Vitis ...   116   2e-24
ref|XP_002276743.1| PREDICTED: GTP-binding protein SAR1A [Vitis ...   115   5e-24
ref|XP_003594789.1| GTP-binding protein SAR1A [Medicago truncatu...   114   6e-24
ref|XP_002874941.1| Os01g0254000 [Arabidopsis lyrata subsp. lyra...   114   6e-24

>ref|XP_003633611.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein SAR1A-like
           [Vitis vinifera]
          Length = 193

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = +2

Query: 2   YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178
           YAASEDELRYHLGLT+FTTGKGKV LA+SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVSLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 193


>ref|XP_002275765.1| PREDICTED: GTP-binding protein SAR1A [Vitis vinifera]
           gi|297743967|emb|CBI36937.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = +2

Query: 2   YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178
           YAASEDELRYHLGLT+FTTGKGKV LA+SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 193


>ref|XP_002276743.1| PREDICTED: GTP-binding protein SAR1A [Vitis vinifera]
          Length = 193

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +2

Query: 2   YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178
           YAASEDELRYHLGLT+FTTGKGKV L +SNVRPLEVFMCSIVRKMGYGEGFKW+SQYIK
Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193


>ref|XP_003594789.1| GTP-binding protein SAR1A [Medicago truncatula]
           gi|355483837|gb|AES65040.1| GTP-binding protein SAR1A
           [Medicago truncatula] gi|388509862|gb|AFK42997.1|
           unknown [Medicago truncatula]
           gi|388516193|gb|AFK46158.1| unknown [Medicago
           truncatula]
          Length = 193

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +2

Query: 2   YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178
           YAASEDELRYHLGLT+FTTGKGKV L +SNVRPLEVFMCSIVRKMGYGEGF+WLSQYIK
Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFQWLSQYIK 193


>ref|XP_002874941.1| Os01g0254000 [Arabidopsis lyrata subsp. lyrata]
           gi|297320778|gb|EFH51200.1| Os01g0254000 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 193

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +2

Query: 2   YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178
           YAASEDELRYHLGL++FTTGKGKV L +SNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK
Sbjct: 135 YAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193


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