BLASTX nr result
ID: Coptis24_contig00000128
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000128 (356 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633611.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ... 117 1e-24 ref|XP_002275765.1| PREDICTED: GTP-binding protein SAR1A [Vitis ... 116 2e-24 ref|XP_002276743.1| PREDICTED: GTP-binding protein SAR1A [Vitis ... 115 5e-24 ref|XP_003594789.1| GTP-binding protein SAR1A [Medicago truncatu... 114 6e-24 ref|XP_002874941.1| Os01g0254000 [Arabidopsis lyrata subsp. lyra... 114 6e-24 >ref|XP_003633611.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein SAR1A-like [Vitis vinifera] Length = 193 Score = 117 bits (292), Expect = 1e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = +2 Query: 2 YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178 YAASEDELRYHLGLT+FTTGKGKV LA+SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVSLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 193 >ref|XP_002275765.1| PREDICTED: GTP-binding protein SAR1A [Vitis vinifera] gi|297743967|emb|CBI36937.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 116 bits (291), Expect = 2e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = +2 Query: 2 YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178 YAASEDELRYHLGLT+FTTGKGKV LA+SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 193 >ref|XP_002276743.1| PREDICTED: GTP-binding protein SAR1A [Vitis vinifera] Length = 193 Score = 115 bits (287), Expect = 5e-24 Identities = 54/59 (91%), Positives = 57/59 (96%) Frame = +2 Query: 2 YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178 YAASEDELRYHLGLT+FTTGKGKV L +SNVRPLEVFMCSIVRKMGYGEGFKW+SQYIK Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193 >ref|XP_003594789.1| GTP-binding protein SAR1A [Medicago truncatula] gi|355483837|gb|AES65040.1| GTP-binding protein SAR1A [Medicago truncatula] gi|388509862|gb|AFK42997.1| unknown [Medicago truncatula] gi|388516193|gb|AFK46158.1| unknown [Medicago truncatula] Length = 193 Score = 114 bits (286), Expect = 6e-24 Identities = 54/59 (91%), Positives = 57/59 (96%) Frame = +2 Query: 2 YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178 YAASEDELRYHLGLT+FTTGKGKV L +SNVRPLEVFMCSIVRKMGYGEGF+WLSQYIK Sbjct: 135 YAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFQWLSQYIK 193 >ref|XP_002874941.1| Os01g0254000 [Arabidopsis lyrata subsp. lyrata] gi|297320778|gb|EFH51200.1| Os01g0254000 [Arabidopsis lyrata subsp. lyrata] Length = 193 Score = 114 bits (286), Expect = 6e-24 Identities = 54/59 (91%), Positives = 57/59 (96%) Frame = +2 Query: 2 YAASEDELRYHLGLTHFTTGKGKVLLANSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 178 YAASEDELRYHLGL++FTTGKGKV L +SNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK Sbjct: 135 YAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193