BLASTX nr result

ID: Coptis24_contig00000125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000125
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69114.1| hypothetical protein VITISV_031841 [Vitis vinifera]   411   e-112
gb|ABK23672.1| unknown [Picea sitchensis] gi|148908495|gb|ABR173...   394   e-107
ref|XP_002284792.2| PREDICTED: uncharacterized protein LOC100255...   353   4e-95
ref|XP_002522665.1| structural constituent of cell wall, putativ...   339   8e-91
ref|XP_004161429.1| PREDICTED: uncharacterized LOC101207232 [Cuc...   338   2e-90

>emb|CAN69114.1| hypothetical protein VITISV_031841 [Vitis vinifera]
          Length = 310

 Score =  411 bits (1057), Expect = e-112
 Identities = 188/298 (63%), Positives = 224/298 (75%)
 Frame = -2

Query: 969 EMGGAWVVFGIFCFSYFHILVDAWRATCHNPYYGNCYGISHNCPPGCPRLCEVDCRLCKP 790
           +M   W++ GI C SY   +V A +A CH+P+Y  CYGI H CP GCP+LCE+DCRLCKP
Sbjct: 31  DMNKGWILLGILCLSYIPSIVRAGKAACHDPFYRRCYGIPHTCPAGCPKLCEIDCRLCKP 90

Query: 789 YCACDRPGAVCQDPRFIGGDGIMFYFHGKKDKDFCLVTDSNIHINAHFIGKRSKKGRDFT 610
           YC+CDRPGAVCQDPR IGGDG+MFYFHGKKDKDFCLV+D  +HINAHFIGK  KKGRDFT
Sbjct: 91  YCSCDRPGAVCQDPRLIGGDGLMFYFHGKKDKDFCLVSDPTVHINAHFIGKSGKKGRDFT 150

Query: 609 WVQAIGLLFGSHQLHLGALQVAKWQEVTENMLIKLDGENILVPAGEGKTWRSPGAGLRIQ 430
           WVQ+IG+LFGSHQL++GA +V+KW E  +NMLI+L+GE I+V AG  K WRSP +GL+IQ
Sbjct: 151 WVQSIGVLFGSHQLYIGAKKVSKWHESVDNMLIQLNGEEIMVAAGMSKRWRSPVSGLKIQ 210

Query: 429 RHAEANLVTVEVAGLFKILARVVPITPHESKVHGYDVTQEDCFAHLELNFKFYSLSSNVN 250
             AE N                       S+VHGYD+T++DCFAHLELNFKF++LS  V+
Sbjct: 211 GIAETN--------------------KRNSRVHGYDITEDDCFAHLELNFKFHTLSKRVD 250

Query: 249 GVLGQTYRPTYRSRVKMAAPMPIMGAAELFTCPHLFAIDCAVSNFNKKIDEEKGGEPL 76
           GVLGQTYR +YRSRVK+AA MPIMG A+ F   HLFA DCAVSNF  K    +GGEPL
Sbjct: 251 GVLGQTYRSSYRSRVKLAAAMPIMGGADKFNTSHLFATDCAVSNFGLKKGIAEGGEPL 308


>gb|ABK23672.1| unknown [Picea sitchensis] gi|148908495|gb|ABR17360.1| unknown
           [Picea sitchensis]
          Length = 319

 Score =  394 bits (1013), Expect = e-107
 Identities = 186/319 (58%), Positives = 234/319 (73%), Gaps = 5/319 (1%)
 Frame = -2

Query: 966 MGGAWVVFGIFCFSYFHILVDAWRATCHNPYYGNCYGISHNCPPGCPRLCEVDCRLCKPY 787
           M   WV+F + C       V AW+A+C +PYYG+CYGI+H CPPGCPR+CEVDC+LCKP 
Sbjct: 1   MACKWVLFAVACCLVAAAQVRAWKASCQDPYYGSCYGIAHVCPPGCPRVCEVDCKLCKPI 60

Query: 786 CACDRPGAVCQDPRFIGGDGIMFYFHGKKDKDFCLVTDSNIHINAHFIGKRSKKG--RDF 613
           CACD+PGAVCQDPRFIGGDGIMFYFHGKKD+DFCLV+++N+HIN HFIGK  K+G  RDF
Sbjct: 61  CACDKPGAVCQDPRFIGGDGIMFYFHGKKDRDFCLVSETNLHINGHFIGKSKKQGLKRDF 120

Query: 612 TWVQAIGLLFGSHQLHLGALQVAKWQEVTENMLIKLDGENILVPAGEGKTWRSPGA-GLR 436
           TWVQ+IG+ F SH+L+LGA +VAKW +  + + + LD + I++P G G  W S  A GL+
Sbjct: 121 TWVQSIGVQFDSHKLYLGANKVAKWDDARDELSLLLDDQPIVLPPGRGADWESASAPGLK 180

Query: 435 IQRHAEANLVTVEVAGLFKILARVVPITPHESKVHGYDVTQEDCFAHLELNFKFYSLSSN 256
           I R  +AN VTVEVA  F I ARVVPIT  ES++H Y++T++DCFAHLELNFKF++LS  
Sbjct: 181 ISRLQDANSVTVEVAESFVITARVVPITAEESRIHKYEITEDDCFAHLELNFKFFALSPQ 240

Query: 255 VNGVLGQTYRPTYRSRVKMAAPMPIMGAAELFTCPHLFAIDCAVSNF-NKKIDEEKGGEP 79
           V GVLGQTY   ++S VK+   MPIMG  + F    LFA DC V+ F  + I+   G   
Sbjct: 241 VTGVLGQTYSAGFKSPVKVGVAMPIMGGEDKFAASDLFAADCKVARFAGRAIESVAGHNF 300

Query: 78  LNVACGGGSGA-KGMVCRR 25
             VACG GS A +G+VCR+
Sbjct: 301 PEVACGSGSAAGRGIVCRK 319


>ref|XP_002284792.2| PREDICTED: uncharacterized protein LOC100255757 [Vitis vinifera]
          Length = 247

 Score =  353 bits (906), Expect = 4e-95
 Identities = 167/236 (70%), Positives = 195/236 (82%)
 Frame = -2

Query: 783 ACDRPGAVCQDPRFIGGDGIMFYFHGKKDKDFCLVTDSNIHINAHFIGKRSKKGRDFTWV 604
           ACDRPGAVCQDPR IGGDG+MFYFHGKKDKDFCLV+D  +HINAHFIGK  KKGRDFTWV
Sbjct: 10  ACDRPGAVCQDPRLIGGDGLMFYFHGKKDKDFCLVSDPTVHINAHFIGKSGKKGRDFTWV 69

Query: 603 QAIGLLFGSHQLHLGALQVAKWQEVTENMLIKLDGENILVPAGEGKTWRSPGAGLRIQRH 424
           Q+IG+LFGSHQL++GA +V+KW E  +NMLI+L+GE I+VPAG  K WRSP +GL+IQ  
Sbjct: 70  QSIGVLFGSHQLYIGAKKVSKWHESVDNMLIQLNGEEIMVPAGMSKRWRSPVSGLKIQGI 129

Query: 423 AEANLVTVEVAGLFKILARVVPITPHESKVHGYDVTQEDCFAHLELNFKFYSLSSNVNGV 244
           AE N V V V GL +I ARVVPI+  ES+VHGYD+T++DCFAHLELNFKF++LS  V+GV
Sbjct: 130 AETNKVKVAVEGLVEIEARVVPISSEESRVHGYDITEDDCFAHLELNFKFHTLSKRVDGV 189

Query: 243 LGQTYRPTYRSRVKMAAPMPIMGAAELFTCPHLFAIDCAVSNFNKKIDEEKGGEPL 76
           LGQTYR +YRSRVK+AA MPIMG A+ F   HLFA DCAVSNF  K    +GGEPL
Sbjct: 190 LGQTYRSSYRSRVKLAAAMPIMGGADKFNTSHLFATDCAVSNFGLKKGIAEGGEPL 245


>ref|XP_002522665.1| structural constituent of cell wall, putative [Ricinus communis]
            gi|223538141|gb|EEF39752.1| structural constituent of
            cell wall, putative [Ricinus communis]
          Length = 535

 Score =  339 bits (869), Expect = 8e-91
 Identities = 163/297 (54%), Positives = 200/297 (67%), Gaps = 7/297 (2%)
 Frame = -2

Query: 894  ATCHNPYYGNCYGISHNCPPGCPRLCEVDCRLCKPYCACDRPGAVCQDPRFIGGDGIMFY 715
            A C N YY  CY   H CP  CP  CEVDC  CKP C CDRPGAVCQDPRFIGGDGI FY
Sbjct: 239  AKCRNEYYPQCYNSEHVCPSSCPGGCEVDCVTCKPVCKCDRPGAVCQDPRFIGGDGITFY 298

Query: 714  FHGKKDKDFCLVTDSNIHINAHFIGKRSKK-GRDFTWVQAIGLLFGSHQLHLGALQVAKW 538
            FHGKKD DFCLV+D+N+HINAHFIGKR++K  RDFTWV++I +LFG HQ+ LGAL+ + W
Sbjct: 299  FHGKKDHDFCLVSDNNLHINAHFIGKRNEKMTRDFTWVKSIAVLFGDHQIFLGALKTSTW 358

Query: 537  QEVTENMLIKLDGENILVPAGEGKTWRSPGA-GLRIQRHAEANLVTVEVAGLFKILARVV 361
             +  + + I  D E + +   EG  W+S     + I R + AN V VEV G FKI A+VV
Sbjct: 359  DDSVDRLAISFDVEPLTLLENEGSRWQSASVPSVSITRTSSANNVVVEVKGNFKITAKVV 418

Query: 360  PITPHESKVHGYDVTQEDCFAHLELNFKFYSLSSNVNGVLGQTYRPTYRSRVKMAAPMPI 181
            PIT  +S++H Y +T++DCFAHL+L FKFYSLS  VNGVLGQTYRP Y SRV + A MP+
Sbjct: 419  PITEEDSRIHNYGITKDDCFAHLDLGFKFYSLSDEVNGVLGQTYRPGYASRVNVKAKMPV 478

Query: 180  MGAAELFTCPHLFAIDCAVSNFN-----KKIDEEKGGEPLNVACGGGSGAKGMVCRR 25
            MG  + F    L A DCAV+ FN           +G E   ++C  G   +G+VC+R
Sbjct: 479  MGGNKEFQTSSLLAADCAVARFNGGNGFNAEGSLQGFELPGLSCASGMDGEGVVCKR 535


>ref|XP_004161429.1| PREDICTED: uncharacterized LOC101207232 [Cucumis sativus]
          Length = 466

 Score =  338 bits (866), Expect = 2e-90
 Identities = 158/298 (53%), Positives = 204/298 (68%), Gaps = 7/298 (2%)
 Frame = -2

Query: 897  RATCHNPYYGNCYGISHNCPPGCPRLCEVDCRLCKPYCACDRPGAVCQDPRFIGGDGIMF 718
            +  C N  Y +CYG+  +CP  CP  CEVDC  C P C C+RPGAVCQDP+FIGGDGI F
Sbjct: 169  KVRCKNRGYPHCYGMELSCPSDCPSQCEVDCVTCSPVCNCNRPGAVCQDPKFIGGDGITF 228

Query: 717  YFHGKKDKDFCLVTDSNIHINAHFIGKRS-KKGRDFTWVQAIGLLFGSHQLHLGALQVAK 541
            YFHGK+DKDFC+VTDSN+HINAHFIG+R+    RDFTWVQ++G+LF SHQL + A + + 
Sbjct: 229  YFHGKRDKDFCIVTDSNLHINAHFIGRRNVDMKRDFTWVQSLGILFDSHQLFISARKTST 288

Query: 540  WQEVTENMLIKLDGENILVPAGEGKTWRSPGA--GLRIQRHAEANLVTVEVAGLFKILAR 367
            W +  + + I LD E I++P  EG TW +  +  G+ I R  + N V +EV G FKI A 
Sbjct: 289  WDDANDRLYISLDDETIILPNQEGATWSNSTSYEGIAITRSRKTNAVEIEVPGNFKIKAV 348

Query: 366  VVPITPHESKVHGYDVTQEDCFAHLELNFKFYSLSSNVNGVLGQTYRPTYRSRVKMAAPM 187
            VVPIT  ES +H Y +TQEDCFAHL+L+FKFY+LS NVNGVLGQTY   Y SR KM   M
Sbjct: 349  VVPITEKESMIHKYGITQEDCFAHLDLSFKFYALSGNVNGVLGQTYGKNYVSRAKMGVAM 408

Query: 186  PIMGAAELFTCPHLFAIDCAVSNFNKKIDEE----KGGEPLNVACGGGSGAKGMVCRR 25
            P++G  + F    +FA DC V+ F K++DE+    +     N++CG     +G+VC+R
Sbjct: 409  PVLGGDKEFASSSIFATDCEVTRFTKEMDEKESYVEAAAYANMSCGSDMDGQGVVCKR 466


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