BLASTX nr result
ID: Coptis24_contig00000113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000113 (474 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147782.1| PREDICTED: DUF21 domain-containing protein A... 89 1e-20 ref|XP_002320632.1| predicted protein [Populus trichocarpa] gi|2... 88 2e-20 ref|XP_004154837.1| PREDICTED: LOW QUALITY PROTEIN: DUF21 domain... 88 3e-20 emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera] 86 1e-19 ref|XP_002282587.1| PREDICTED: DUF21 domain-containing protein A... 86 2e-19 >ref|XP_004147782.1| PREDICTED: DUF21 domain-containing protein At1g47330-like [Cucumis sativus] Length = 449 Score = 89.0 bits (219), Expect(2) = 1e-20 Identities = 44/79 (55%), Positives = 53/79 (67%) Frame = +2 Query: 26 AGVETAGVKQECCDSQTAFPSRKGYQQSDNCPPIAPGSKKRHRDCSYCILDVENSPIPEF 205 A + G+K E D+QT + G Q+ PP P KKRHR CS+CILDVEN+P+P F Sbjct: 329 AAAQNIGMKMESVDAQTV-AEKAGGLQTKKSPPATPAFKKRHRGCSFCILDVENAPLPVF 387 Query: 206 SSNEQVVGVITMEDVIEEL 262 E+VVGVITMEDVIEEL Sbjct: 388 PLGEEVVGVITMEDVIEEL 406 Score = 35.4 bits (80), Expect(2) = 1e-20 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = +3 Query: 366 YVNIHNRIKINMQASQGKTNYLNSQEPSPTL 458 YVNIHNRIKINMQ S K + +N + SP + Sbjct: 418 YVNIHNRIKINMQPSPEKLS-INQPQLSPNV 447 >ref|XP_002320632.1| predicted protein [Populus trichocarpa] gi|222861405|gb|EEE98947.1| predicted protein [Populus trichocarpa] Length = 513 Score = 87.8 bits (216), Expect(2) = 2e-20 Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = +2 Query: 8 SGAIPNAGVETAGVKQECCDSQTAFPSRKGYQQSDNCPPIAPGS-KKRHRDCSYCILDVE 184 + AIPN + A + + D+QTA G QQ PP P + KKRH+ CS+CILDVE Sbjct: 344 TSAIPN---KKAALDSD--DNQTAATKNDGGQQIKKSPPSTPPAFKKRHKGCSFCILDVE 398 Query: 185 NSPIPEFSSNEQVVGVITMEDVIEEL 262 +PIPEF SNE+VVGVITMEDVIEEL Sbjct: 399 KAPIPEFPSNEEVVGVITMEDVIEEL 424 Score = 35.8 bits (81), Expect(2) = 2e-20 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = +3 Query: 366 YVNIHNRIKINMQASQGK 419 YVNIHNRIKINM ASQ K Sbjct: 436 YVNIHNRIKINMHASQDK 453 >ref|XP_004154837.1| PREDICTED: LOW QUALITY PROTEIN: DUF21 domain-containing protein At1g47330-like [Cucumis sativus] Length = 449 Score = 87.8 bits (216), Expect(2) = 3e-20 Identities = 44/79 (55%), Positives = 52/79 (65%) Frame = +2 Query: 26 AGVETAGVKQECCDSQTAFPSRKGYQQSDNCPPIAPGSKKRHRDCSYCILDVENSPIPEF 205 A + G+K E D+QT + G Q+ PP P KKRHR CS+CILDVEN P+P F Sbjct: 329 AAAQNIGMKMESVDAQTV-AEKAGGLQTKKSPPATPAFKKRHRGCSFCILDVENVPLPVF 387 Query: 206 SSNEQVVGVITMEDVIEEL 262 E+VVGVITMEDVIEEL Sbjct: 388 PLGEEVVGVITMEDVIEEL 406 Score = 35.4 bits (80), Expect(2) = 3e-20 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = +3 Query: 366 YVNIHNRIKINMQASQGKTNYLNSQEPSPTL 458 YVNIHNRIKINMQ S K + +N + SP + Sbjct: 418 YVNIHNRIKINMQPSPEKLS-INQPQLSPNV 447 >emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera] Length = 1762 Score = 85.9 bits (211), Expect(2) = 1e-19 Identities = 45/73 (61%), Positives = 50/73 (68%) Frame = +2 Query: 44 GVKQECCDSQTAFPSRKGYQQSDNCPPIAPGSKKRHRDCSYCILDVENSPIPEFSSNEQV 223 GVKQE D+ TA QQ P + P KKRHR CS+CILDVEN+P+PEF NE Sbjct: 373 GVKQELHDAGTAVAKNDADQQQKKNPAV-PVFKKRHRGCSFCILDVENAPLPEFPPNEVA 431 Query: 224 VGVITMEDVIEEL 262 VGVITMEDVIEEL Sbjct: 432 VGVITMEDVIEEL 444 Score = 35.0 bits (79), Expect(2) = 1e-19 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +3 Query: 366 YVNIHNRIKINMQASQGKTNYLNSQEPSPT 455 YVNIHNRIK+NM AS + + NS P P+ Sbjct: 456 YVNIHNRIKVNMHASSQEKD-PNSNXPQPS 484 >ref|XP_002282587.1| PREDICTED: DUF21 domain-containing protein At1g47330-like [Vitis vinifera] Length = 526 Score = 85.9 bits (211), Expect(2) = 2e-19 Identities = 45/73 (61%), Positives = 50/73 (68%) Frame = +2 Query: 44 GVKQECCDSQTAFPSRKGYQQSDNCPPIAPGSKKRHRDCSYCILDVENSPIPEFSSNEQV 223 GVKQE D+ TA QQ P + P KKRHR CS+CILDVEN+P+PEF NE Sbjct: 347 GVKQELHDAGTAVAKNDADQQQKKNPSV-PVFKKRHRGCSFCILDVENAPLPEFPPNEVA 405 Query: 224 VGVITMEDVIEEL 262 VGVITMEDVIEEL Sbjct: 406 VGVITMEDVIEEL 418 Score = 34.7 bits (78), Expect(2) = 2e-19 Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 366 YVNIHNRIKINMQA-SQGKTNYLNSQEPSPTLLSKA 470 YVNIHNRIK+NM A SQ K N +PS + S A Sbjct: 430 YVNIHNRIKVNMHASSQEKDPNSNLPQPSTKVSSIA 465