BLASTX nr result

ID: Coptis24_contig00000108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000108
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265919.1| PREDICTED: uncharacterized protein LOC100248...   162   3e-38
emb|CAN79858.1| hypothetical protein VITISV_030201 [Vitis vinifera]   162   3e-38
emb|CBJ19441.1| nucleotide-sensitive chloride conductance regula...   159   3e-37
ref|XP_002510919.1| Methylosome subunit pICln, putative [Ricinus...   158   5e-37
ref|XP_002864782.1| hypothetical protein ARALYDRAFT_496406 [Arab...   153   1e-35

>ref|XP_002265919.1| PREDICTED: uncharacterized protein LOC100248089 [Vitis vinifera]
           gi|296084143|emb|CBI24531.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/105 (72%), Positives = 91/105 (86%)
 Frame = +2

Query: 20  MVLGLRNFSQRTGDGVGLPVLDTANGEELMHVQSNVSIVLGNNPAPDSPGTLYISTKKVV 199
           MV+GLRNF++R GDG G PVL+  NGEELMHV+S V+IVLGN+P P+SPGTL+ISTK+V+
Sbjct: 1   MVVGLRNFTERVGDGAGQPVLNADNGEELMHVESGVAIVLGNHP-PESPGTLFISTKQVI 59

Query: 200 WLSDVDKEKGYAVDFLSISLHATSRDPETFPSPCIYAQIETEAGE 334
           WLSDVD+ KGYAVDFLS+SLHA SRDPE + SPCIY QIETE  +
Sbjct: 60  WLSDVDRAKGYAVDFLSVSLHAVSRDPEAYSSPCIYTQIETEEND 104


>emb|CAN79858.1| hypothetical protein VITISV_030201 [Vitis vinifera]
          Length = 212

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/105 (72%), Positives = 91/105 (86%)
 Frame = +2

Query: 20  MVLGLRNFSQRTGDGVGLPVLDTANGEELMHVQSNVSIVLGNNPAPDSPGTLYISTKKVV 199
           MV+GLRNF++R GDG G PVL+  NGEELMHV+S V+IVLGN+P P+SPGTL+ISTK+V+
Sbjct: 1   MVVGLRNFTERVGDGAGQPVLNADNGEELMHVESGVAIVLGNHP-PESPGTLFISTKQVI 59

Query: 200 WLSDVDKEKGYAVDFLSISLHATSRDPETFPSPCIYAQIETEAGE 334
           WLSDVD+ KGYAVDFLS+SLHA SRDPE + SPCIY QIETE  +
Sbjct: 60  WLSDVDRAKGYAVDFLSVSLHAVSRDPEAYSSPCIYTQIETEEND 104


>emb|CBJ19441.1| nucleotide-sensitive chloride conductance regulator [Citrus
           clementina]
          Length = 230

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/102 (74%), Positives = 89/102 (87%)
 Frame = +2

Query: 20  MVLGLRNFSQRTGDGVGLPVLDTANGEELMHVQSNVSIVLGNNPAPDSPGTLYISTKKVV 199
           MV+GLR F+QRTGDG G P+LDT NGEEL+ VQ +VSIV+G   AP+SPGTLYI++K+VV
Sbjct: 1   MVVGLRQFTQRTGDGAGEPILDTENGEELIRVQPSVSIVVGTR-APESPGTLYITSKQVV 59

Query: 200 WLSDVDKEKGYAVDFLSISLHATSRDPETFPSPCIYAQIETE 325
           WLSDVD+ KGYAVDFLS+SLHA SRDPE +PSPCIY QIETE
Sbjct: 60  WLSDVDRAKGYAVDFLSLSLHAVSRDPEAYPSPCIYTQIETE 101


>ref|XP_002510919.1| Methylosome subunit pICln, putative [Ricinus communis]
           gi|223550034|gb|EEF51521.1| Methylosome subunit pICln,
           putative [Ricinus communis]
          Length = 230

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/105 (73%), Positives = 88/105 (83%)
 Frame = +2

Query: 20  MVLGLRNFSQRTGDGVGLPVLDTANGEELMHVQSNVSIVLGNNPAPDSPGTLYISTKKVV 199
           MVLGLR F++R GDG G PVLDT NGEELMHVQ  V++V+GN  A +S GTL+ISTKKV+
Sbjct: 1   MVLGLRQFTERRGDGTGEPVLDTENGEELMHVQPGVAVVIGNRSA-ESSGTLFISTKKVI 59

Query: 200 WLSDVDKEKGYAVDFLSISLHATSRDPETFPSPCIYAQIETEAGE 334
           WLSDVD+ KGYAV FLSISLHA SRDPE +PSPCIY QIET+A E
Sbjct: 60  WLSDVDRAKGYAVGFLSISLHAVSRDPEAYPSPCIYTQIETKADE 104


>ref|XP_002864782.1| hypothetical protein ARALYDRAFT_496406 [Arabidopsis lyrata subsp.
           lyrata] gi|297310617|gb|EFH41041.1| hypothetical protein
           ARALYDRAFT_496406 [Arabidopsis lyrata subsp. lyrata]
          Length = 231

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/105 (70%), Positives = 88/105 (83%)
 Frame = +2

Query: 20  MVLGLRNFSQRTGDGVGLPVLDTANGEELMHVQSNVSIVLGNNPAPDSPGTLYISTKKVV 199
           MV+GLR+F+ RTGDG G PVLD ANGEELMHVQ++V++ LGN P  +SPGTLYI+++K++
Sbjct: 1   MVVGLRDFTLRTGDGSGKPVLDEANGEELMHVQTSVAVALGNLPV-ESPGTLYITSRKLI 59

Query: 200 WLSDVDKEKGYAVDFLSISLHATSRDPETFPSPCIYAQIETEAGE 334
           WLSDVD  KGYAVDFLSISLHA SRDPE + SPCIY QIE E  E
Sbjct: 60  WLSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEIEEDE 104


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