BLASTX nr result

ID: Coptis24_contig00000107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000107
         (2336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   758   0.0  
ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|2...   721   0.0  
ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C...   715   0.0  
ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [C...   706   0.0  
ref|XP_004167322.1| PREDICTED: LOW QUALITY PROTEIN: large subuni...   690   0.0  

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  758 bits (1957), Expect = 0.0
 Identities = 391/600 (65%), Positives = 445/600 (74%), Gaps = 6/600 (1%)
 Frame = +2

Query: 110  MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289
            MGKNEKTGLGRALVK HNQM+ ++ EKGR Y+NQ KKVLES+T+V D            R
Sbjct: 1    MGKNEKTGLGRALVKHHNQMLQQSNEKGRFYKNQHKKVLESITDVNDIDAVIQEADEAQR 60

Query: 290  LYSTDHPAPNLPINLD---GVSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEE 460
            L++ DHPAPN+ INLD     S +  E +R+Q+K EEA H SSLRVPRRPPWN GM  EE
Sbjct: 61   LFAFDHPAPNVLINLDTNASTSNMTDEERREQQKKEEALHASSLRVPRRPPWNVGMTAEE 120

Query: 461  LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 640
            LD NE+QA L+WRRSLARLE NE LVLTPFEKNLDIWRQLWRVLERSDL+VMVVDARDPL
Sbjct: 121  LDANERQALLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPL 180

Query: 641  FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 820
            FYRCPDLEAYA+EIDEHK+TLLLVNKADLLP ++RE+WAKYF  +GILF+FWSAKAA AA
Sbjct: 181  FYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRERWAKYFRLHGILFIFWSAKAASAA 240

Query: 821  LEGKPLKGS-ENQSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXX 997
            LEGK L    E Q  LQ +D  DT I+GRD                +             
Sbjct: 241  LEGKKLNVQWETQKPLQETDDADTKIYGRDELLARLQSEAEEISVRKRKSSSSSTDSSHV 300

Query: 998  XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1177
                              GFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD
Sbjct: 301  QFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 360

Query: 1178 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1357
            EL LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRVPR  IE+VY ITL
Sbjct: 361  ELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL 420

Query: 1358 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1537
            PKPKPYE Q RPPLA+E LRAYC+SRGYVASSGLPDET+AAR ILKDY+DGK+PHFE PP
Sbjct: 421  PKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEMPP 480

Query: 1538 GMPNKDDQEVDTLELGTSPAYETDSSDAEN--NSATEGTSTNNLEFVLNDLESFDITNGL 1711
            GM ++  +  D  E   S  +E+D+SD+EN  NS +E  S  NLE VLNDL++FD+ NGL
Sbjct: 481  GMTDEVSEFEDPAEPSFSETHESDASDSENPPNSESESESAPNLEHVLNDLDAFDMANGL 540

Query: 1712 XXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPL 1891
                                +KQHKKPQRKK+RSWRV N+E DGMP+ +VFQKP+N+GPL
Sbjct: 541  ------ASKKAPVQKTPKAPHKQHKKPQRKKDRSWRVKNDEDDGMPVARVFQKPVNTGPL 594


>ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  721 bits (1861), Expect = 0.0
 Identities = 378/604 (62%), Positives = 437/604 (72%), Gaps = 9/604 (1%)
 Frame = +2

Query: 110  MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289
            MGKNEKT LGRALVK HNQM+ E+KEKGR Y++Q KKVLES T+VT+             
Sbjct: 1    MGKNEKTRLGRALVKHHNQMIQESKEKGRYYKSQHKKVLESFTDVTEIDAVMEQVDEGEL 60

Query: 290  LYSTD----HPAPNLPINLD---GVSEIPVEVQRQQRKMEEAEHESSLR-VPRRPPWNAG 445
              S+     HP PNL INLD   GVS++  E +R+++K EEA H SSLR + + PPWNAG
Sbjct: 61   FSSSSSSVHHPVPNLLINLDTGSGVSDMTAEEKREKQKKEEALHASSLRFLSKMPPWNAG 120

Query: 446  MPVEELDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVD 625
            M VEELD NEKQAFL WRRSLA LEENE LVLTPFEKNLDIWRQLWRVLERSDL+VMVVD
Sbjct: 121  MSVEELDANEKQAFLTWRRSLASLEENENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVD 180

Query: 626  ARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAK 805
            ARDPLFYRCPDLEAYAREIDEHK TLLLVNKADLLP ++R+KWA YF   GILFLFWSAK
Sbjct: 181  ARDPLFYRCPDLEAYAREIDEHKRTLLLVNKADLLPFSVRQKWADYFRHLGILFLFWSAK 240

Query: 806  AAYAALEGKPLKGSEN-QSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXX 982
            AA A LEGK L+G  N Q+TLQ  D  DT I+GRD                R        
Sbjct: 241  AATAVLEGKILQGPWNEQATLQEMDDPDTKIYGRDELLARLQSEAETIVRIRSKSVSSGS 300

Query: 983  XXXXXXXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQT 1162
                                   GFVGYPNVGKSSTINALVG+KRTGVTSTPGKTKHFQT
Sbjct: 301  GPSNFQSSGGKFAGNSAPKHVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQT 360

Query: 1163 LIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEV 1342
            LI+S++L LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRVPR  IE+V
Sbjct: 361  LIMSEKLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRRVIEDV 420

Query: 1343 YNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPH 1522
            Y I LPKPKPYE Q+RPPLA+ELLR YC+SRGYV SSGLPDET+AAR ILKDY+DGKL H
Sbjct: 421  YKINLPKPKPYEPQSRPPLASELLRTYCASRGYVGSSGLPDETRAARQILKDYIDGKLTH 480

Query: 1523 FEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDIT 1702
             E PPG+ +++  + D      S  +++DSSD EN +  +G +T  LE VL+DL SFD+ 
Sbjct: 481  HEIPPGISDEEGSDQDDAGSSLSETHQSDSSDTENPAENDGKNTPALEHVLDDLNSFDMA 540

Query: 1703 NGLXXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINS 1882
            NGL                   S+K HKKPQ+KK+RSWR+ N+  DGMP+++VFQK +N+
Sbjct: 541  NGL---AHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIENDGGDGMPVVRVFQKSVNT 597

Query: 1883 GPLK 1894
            GPLK
Sbjct: 598  GPLK 601


>ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  715 bits (1845), Expect = 0.0
 Identities = 375/601 (62%), Positives = 439/601 (73%), Gaps = 5/601 (0%)
 Frame = +2

Query: 110  MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289
            M +N+K GLGRALVKQHNQM+ ++KEKGR Y++Q KKVLESVTEV+D            R
Sbjct: 1    MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 290  LYSTDHPAPNLPINLDG---VSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEE 460
            L+S D+P PN  INLDG   VSE+ +  +R Q+K+EEA H SSLRVPRRPPWNA M  EE
Sbjct: 61   LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 461  LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 640
            LD+NE+Q+FL+WRRSLARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPL
Sbjct: 121  LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPL 180

Query: 641  FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 820
            FYRCPDLEAYARE+D+HK T+LLVNKADLLP ++R+KWA++F+ + IL+LFWSAKAA A 
Sbjct: 181  FYRCPDLEAYAREVDQHKRTMLLVNKADLLPYSVRKKWAEFFNQHEILYLFWSAKAASAT 240

Query: 821  LEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXX 997
            LEG+ L    N +  QN  D  DT I+ RD                R + R         
Sbjct: 241  LEGRKLGSGWNTNEPQNGVDDPDTKIYARDELLSRLQYEAERIVERRASSRSDNLSLEGC 300

Query: 998  XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1177
                              GFVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIISD
Sbjct: 301  MNEKSSGSVMV-------GFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISD 353

Query: 1178 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1357
            +L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+HREAVQVVANRVPR  IE+VY ITL
Sbjct: 354  KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL 413

Query: 1358 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1537
            PKPKPYE Q+RPPLA+ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PP
Sbjct: 414  PKPKPYEPQSRPPLASELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPP 473

Query: 1538 GMPNKDD-QEVDTLELGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNGLX 1714
            GM  +D  QE D      S  +++DS D E +S  +G S    E V++ L+SFDI NGL 
Sbjct: 474  GMLKEDHIQEEDARSFELSDTHDSDSDDVE-DSNMDGESAPGFEQVVDYLDSFDIANGL- 531

Query: 1715 XXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPLK 1894
                              S+KQHKKPQRKK+RSWRVGN+  DGMP ++V QKPINSG LK
Sbjct: 532  ------AKPSITEKKPKASHKQHKKPQRKKDRSWRVGNDGGDGMPAVRVLQKPINSGTLK 585

Query: 1895 A 1897
            A
Sbjct: 586  A 586


>ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  706 bits (1823), Expect = 0.0
 Identities = 367/602 (60%), Positives = 435/602 (72%), Gaps = 7/602 (1%)
 Frame = +2

Query: 110  MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289
            MGKN+K GLGRALVKQHNQM+ ++KEKGR Y++Q KKVLESVTEV+D            R
Sbjct: 1    MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 290  LYSTDHPAPNLPINLDG---VSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEE 460
            L+S D+P PN  INLDG   +SE+    +R+Q+K+EEA H SSLRVPRRPPWNA M  EE
Sbjct: 61   LFSIDNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNARMSAEE 120

Query: 461  LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 640
            LD+NE+Q+FL+WRRSLARLEENE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPL
Sbjct: 121  LDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPL 180

Query: 641  FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 820
            FYRCPDLEAYARE+D+HK T+LLVNKADLL  ++R+KWA++F  + IL+LFWSAKAA A 
Sbjct: 181  FYRCPDLEAYAREVDQHKRTMLLVNKADLLSYSVRKKWAEFFSQHDILYLFWSAKAASAT 240

Query: 821  LEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXX 997
            L+GK L    N +  QN  D  DT I+ RD                R +           
Sbjct: 241  LDGKKLSTQWNTNEPQNGVDDPDTKIYARDELLARLQYEAEQIVERRTS--STNSTSRSD 298

Query: 998  XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1177
                              GFVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIISD
Sbjct: 299  NLSQGGKMNKKSPGSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISD 358

Query: 1178 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1357
            +L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+HREA+QVVANRVPR  IE+VY I L
Sbjct: 359  KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEDVYKIKL 418

Query: 1358 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1537
            PKPKPYE Q++PPLA+ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PP
Sbjct: 419  PKPKPYEPQSQPPLASELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPP 478

Query: 1538 GMPNKD---DQEVDTLELGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNG 1708
            GM N+D   +++ +TL+L  +   ++DS D EN            E V + L+SFD+ NG
Sbjct: 479  GMSNEDHIQEEDAETLKLSATHDSDSDSDDGENGP--------GFEQVADYLDSFDLANG 530

Query: 1709 LXXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGP 1888
            L                   S+K HKKPQRKK RSWR+GN+  DGMP ++V QKPINSGP
Sbjct: 531  L-----AKPNIITEKKAKASSHKHHKKPQRKKERSWRMGNDGGDGMPAVRVLQKPINSGP 585

Query: 1889 LK 1894
            LK
Sbjct: 586  LK 587


>ref|XP_004167322.1| PREDICTED: LOW QUALITY PROTEIN: large subunit GTPase 1 homolog,
            partial [Cucumis sativus]
          Length = 573

 Score =  690 bits (1781), Expect = 0.0
 Identities = 363/586 (61%), Positives = 424/586 (72%), Gaps = 5/586 (0%)
 Frame = +2

Query: 155  QHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXRLYSTDHPAPNLPINL 334
            QHNQM+ ++KEKGR Y++Q KKVLESVTEV+D            RL+S D+P PN  INL
Sbjct: 1    QHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAERLFSIDNPTPNFLINL 60

Query: 335  DG---VSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEELDNNEKQAFLVWRRS 505
            DG   VSE+ +  +R Q+K+EEA H SSLRVPRRPPWNA M  EELD+NE+Q+FL+WRRS
Sbjct: 61   DGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEELDDNERQSFLIWRRS 120

Query: 506  LARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREID 685
            LARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPLFYRCPDLEAYARE+D
Sbjct: 121  LARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAREVD 180

Query: 686  EHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTL 865
            +HK T+LLVNKADLLP ++R+KWA++F+ + IL+LFWSAKAA A LEG+ L    N +  
Sbjct: 181  QHKRTMLLVNKADLLPYSVRKKWAEFFNQHEILYLFWSAKAASATLEGRKLGSGWNTNEP 240

Query: 866  QNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXXXXXXXXXXXXXXXXX 1042
            QN  D  DT I+ RD                R + R                        
Sbjct: 241  QNGVDDPDTKIYARDELLSRLQYEAERIVERRASSRSDNLSLEGCMNEKSSGSVMV---- 296

Query: 1043 XXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSF 1222
               GFVGYPNVGKSSTINALVG KR GVTSTPGKTKHFQTLIISD+L LCDCPGLVFPSF
Sbjct: 297  ---GFVGYPNVGKSSTINALVGXKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSF 353

Query: 1223 TTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLA 1402
            ++SRYEM+A GVLPIDRMT+HREAVQVVANRVPR  IE+VY ITLPKPKPYE Q+RPPLA
Sbjct: 354  SSSRYEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITLPKPKPYEPQSRPPLA 413

Query: 1403 AELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPPGMPNKDD-QEVDTLE 1579
            +ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PPGM  +D  QE D   
Sbjct: 414  SELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPPGMLKEDHIQEEDARS 473

Query: 1580 LGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXX 1759
               S  +++DS D E +S  +G S    E V++ L+SFDI NGL                
Sbjct: 474  FELSDTHDSDSDDVE-DSNMDGESAPGFEQVVDYLDSFDIANGL-------AKPSITEKK 525

Query: 1760 XXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPLKA 1897
               S+KQHKKPQ KK+RSWRVGN+  DGMP ++V QKPINSG LKA
Sbjct: 526  PKASHKQHKKPQXKKDRSWRVGNDGGDGMPAVRVLQKPINSGTLKA 571


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