BLASTX nr result
ID: Coptis24_contig00000107
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000107 (2336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V... 758 0.0 ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|2... 721 0.0 ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C... 715 0.0 ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [C... 706 0.0 ref|XP_004167322.1| PREDICTED: LOW QUALITY PROTEIN: large subuni... 690 0.0 >ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera] Length = 597 Score = 758 bits (1957), Expect = 0.0 Identities = 391/600 (65%), Positives = 445/600 (74%), Gaps = 6/600 (1%) Frame = +2 Query: 110 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289 MGKNEKTGLGRALVK HNQM+ ++ EKGR Y+NQ KKVLES+T+V D R Sbjct: 1 MGKNEKTGLGRALVKHHNQMLQQSNEKGRFYKNQHKKVLESITDVNDIDAVIQEADEAQR 60 Query: 290 LYSTDHPAPNLPINLD---GVSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEE 460 L++ DHPAPN+ INLD S + E +R+Q+K EEA H SSLRVPRRPPWN GM EE Sbjct: 61 LFAFDHPAPNVLINLDTNASTSNMTDEERREQQKKEEALHASSLRVPRRPPWNVGMTAEE 120 Query: 461 LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 640 LD NE+QA L+WRRSLARLE NE LVLTPFEKNLDIWRQLWRVLERSDL+VMVVDARDPL Sbjct: 121 LDANERQALLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPL 180 Query: 641 FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 820 FYRCPDLEAYA+EIDEHK+TLLLVNKADLLP ++RE+WAKYF +GILF+FWSAKAA AA Sbjct: 181 FYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRERWAKYFRLHGILFIFWSAKAASAA 240 Query: 821 LEGKPLKGS-ENQSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXX 997 LEGK L E Q LQ +D DT I+GRD + Sbjct: 241 LEGKKLNVQWETQKPLQETDDADTKIYGRDELLARLQSEAEEISVRKRKSSSSSTDSSHV 300 Query: 998 XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1177 GFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD Sbjct: 301 QFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 360 Query: 1178 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1357 EL LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRVPR IE+VY ITL Sbjct: 361 ELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL 420 Query: 1358 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1537 PKPKPYE Q RPPLA+E LRAYC+SRGYVASSGLPDET+AAR ILKDY+DGK+PHFE PP Sbjct: 421 PKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEMPP 480 Query: 1538 GMPNKDDQEVDTLELGTSPAYETDSSDAEN--NSATEGTSTNNLEFVLNDLESFDITNGL 1711 GM ++ + D E S +E+D+SD+EN NS +E S NLE VLNDL++FD+ NGL Sbjct: 481 GMTDEVSEFEDPAEPSFSETHESDASDSENPPNSESESESAPNLEHVLNDLDAFDMANGL 540 Query: 1712 XXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPL 1891 +KQHKKPQRKK+RSWRV N+E DGMP+ +VFQKP+N+GPL Sbjct: 541 ------ASKKAPVQKTPKAPHKQHKKPQRKKDRSWRVKNDEDDGMPVARVFQKPVNTGPL 594 >ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1| predicted protein [Populus trichocarpa] Length = 603 Score = 721 bits (1861), Expect = 0.0 Identities = 378/604 (62%), Positives = 437/604 (72%), Gaps = 9/604 (1%) Frame = +2 Query: 110 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289 MGKNEKT LGRALVK HNQM+ E+KEKGR Y++Q KKVLES T+VT+ Sbjct: 1 MGKNEKTRLGRALVKHHNQMIQESKEKGRYYKSQHKKVLESFTDVTEIDAVMEQVDEGEL 60 Query: 290 LYSTD----HPAPNLPINLD---GVSEIPVEVQRQQRKMEEAEHESSLR-VPRRPPWNAG 445 S+ HP PNL INLD GVS++ E +R+++K EEA H SSLR + + PPWNAG Sbjct: 61 FSSSSSSVHHPVPNLLINLDTGSGVSDMTAEEKREKQKKEEALHASSLRFLSKMPPWNAG 120 Query: 446 MPVEELDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVD 625 M VEELD NEKQAFL WRRSLA LEENE LVLTPFEKNLDIWRQLWRVLERSDL+VMVVD Sbjct: 121 MSVEELDANEKQAFLTWRRSLASLEENENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVD 180 Query: 626 ARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAK 805 ARDPLFYRCPDLEAYAREIDEHK TLLLVNKADLLP ++R+KWA YF GILFLFWSAK Sbjct: 181 ARDPLFYRCPDLEAYAREIDEHKRTLLLVNKADLLPFSVRQKWADYFRHLGILFLFWSAK 240 Query: 806 AAYAALEGKPLKGSEN-QSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXX 982 AA A LEGK L+G N Q+TLQ D DT I+GRD R Sbjct: 241 AATAVLEGKILQGPWNEQATLQEMDDPDTKIYGRDELLARLQSEAETIVRIRSKSVSSGS 300 Query: 983 XXXXXXXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQT 1162 GFVGYPNVGKSSTINALVG+KRTGVTSTPGKTKHFQT Sbjct: 301 GPSNFQSSGGKFAGNSAPKHVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQT 360 Query: 1163 LIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEV 1342 LI+S++L LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRVPR IE+V Sbjct: 361 LIMSEKLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRRVIEDV 420 Query: 1343 YNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPH 1522 Y I LPKPKPYE Q+RPPLA+ELLR YC+SRGYV SSGLPDET+AAR ILKDY+DGKL H Sbjct: 421 YKINLPKPKPYEPQSRPPLASELLRTYCASRGYVGSSGLPDETRAARQILKDYIDGKLTH 480 Query: 1523 FEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDIT 1702 E PPG+ +++ + D S +++DSSD EN + +G +T LE VL+DL SFD+ Sbjct: 481 HEIPPGISDEEGSDQDDAGSSLSETHQSDSSDTENPAENDGKNTPALEHVLDDLNSFDMA 540 Query: 1703 NGLXXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINS 1882 NGL S+K HKKPQ+KK+RSWR+ N+ DGMP+++VFQK +N+ Sbjct: 541 NGL---AHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIENDGGDGMPVVRVFQKSVNT 597 Query: 1883 GPLK 1894 GPLK Sbjct: 598 GPLK 601 >ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus] Length = 588 Score = 715 bits (1845), Expect = 0.0 Identities = 375/601 (62%), Positives = 439/601 (73%), Gaps = 5/601 (0%) Frame = +2 Query: 110 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289 M +N+K GLGRALVKQHNQM+ ++KEKGR Y++Q KKVLESVTEV+D R Sbjct: 1 MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60 Query: 290 LYSTDHPAPNLPINLDG---VSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEE 460 L+S D+P PN INLDG VSE+ + +R Q+K+EEA H SSLRVPRRPPWNA M EE Sbjct: 61 LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120 Query: 461 LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 640 LD+NE+Q+FL+WRRSLARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPL Sbjct: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPL 180 Query: 641 FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 820 FYRCPDLEAYARE+D+HK T+LLVNKADLLP ++R+KWA++F+ + IL+LFWSAKAA A Sbjct: 181 FYRCPDLEAYAREVDQHKRTMLLVNKADLLPYSVRKKWAEFFNQHEILYLFWSAKAASAT 240 Query: 821 LEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXX 997 LEG+ L N + QN D DT I+ RD R + R Sbjct: 241 LEGRKLGSGWNTNEPQNGVDDPDTKIYARDELLSRLQYEAERIVERRASSRSDNLSLEGC 300 Query: 998 XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1177 GFVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIISD Sbjct: 301 MNEKSSGSVMV-------GFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISD 353 Query: 1178 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1357 +L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+HREAVQVVANRVPR IE+VY ITL Sbjct: 354 KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL 413 Query: 1358 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1537 PKPKPYE Q+RPPLA+ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PP Sbjct: 414 PKPKPYEPQSRPPLASELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPP 473 Query: 1538 GMPNKDD-QEVDTLELGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNGLX 1714 GM +D QE D S +++DS D E +S +G S E V++ L+SFDI NGL Sbjct: 474 GMLKEDHIQEEDARSFELSDTHDSDSDDVE-DSNMDGESAPGFEQVVDYLDSFDIANGL- 531 Query: 1715 XXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPLK 1894 S+KQHKKPQRKK+RSWRVGN+ DGMP ++V QKPINSG LK Sbjct: 532 ------AKPSITEKKPKASHKQHKKPQRKKDRSWRVGNDGGDGMPAVRVLQKPINSGTLK 585 Query: 1895 A 1897 A Sbjct: 586 A 586 >ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus] Length = 588 Score = 706 bits (1823), Expect = 0.0 Identities = 367/602 (60%), Positives = 435/602 (72%), Gaps = 7/602 (1%) Frame = +2 Query: 110 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 289 MGKN+K GLGRALVKQHNQM+ ++KEKGR Y++Q KKVLESVTEV+D R Sbjct: 1 MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60 Query: 290 LYSTDHPAPNLPINLDG---VSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEE 460 L+S D+P PN INLDG +SE+ +R+Q+K+EEA H SSLRVPRRPPWNA M EE Sbjct: 61 LFSIDNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNARMSAEE 120 Query: 461 LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 640 LD+NE+Q+FL+WRRSLARLEENE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPL Sbjct: 121 LDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPL 180 Query: 641 FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 820 FYRCPDLEAYARE+D+HK T+LLVNKADLL ++R+KWA++F + IL+LFWSAKAA A Sbjct: 181 FYRCPDLEAYAREVDQHKRTMLLVNKADLLSYSVRKKWAEFFSQHDILYLFWSAKAASAT 240 Query: 821 LEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXX 997 L+GK L N + QN D DT I+ RD R + Sbjct: 241 LDGKKLSTQWNTNEPQNGVDDPDTKIYARDELLARLQYEAEQIVERRTS--STNSTSRSD 298 Query: 998 XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1177 GFVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIISD Sbjct: 299 NLSQGGKMNKKSPGSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISD 358 Query: 1178 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1357 +L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+HREA+QVVANRVPR IE+VY I L Sbjct: 359 KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEDVYKIKL 418 Query: 1358 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1537 PKPKPYE Q++PPLA+ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PP Sbjct: 419 PKPKPYEPQSQPPLASELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPP 478 Query: 1538 GMPNKD---DQEVDTLELGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNG 1708 GM N+D +++ +TL+L + ++DS D EN E V + L+SFD+ NG Sbjct: 479 GMSNEDHIQEEDAETLKLSATHDSDSDSDDGENGP--------GFEQVADYLDSFDLANG 530 Query: 1709 LXXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGP 1888 L S+K HKKPQRKK RSWR+GN+ DGMP ++V QKPINSGP Sbjct: 531 L-----AKPNIITEKKAKASSHKHHKKPQRKKERSWRMGNDGGDGMPAVRVLQKPINSGP 585 Query: 1889 LK 1894 LK Sbjct: 586 LK 587 >ref|XP_004167322.1| PREDICTED: LOW QUALITY PROTEIN: large subunit GTPase 1 homolog, partial [Cucumis sativus] Length = 573 Score = 690 bits (1781), Expect = 0.0 Identities = 363/586 (61%), Positives = 424/586 (72%), Gaps = 5/586 (0%) Frame = +2 Query: 155 QHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXRLYSTDHPAPNLPINL 334 QHNQM+ ++KEKGR Y++Q KKVLESVTEV+D RL+S D+P PN INL Sbjct: 1 QHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAERLFSIDNPTPNFLINL 60 Query: 335 DG---VSEIPVEVQRQQRKMEEAEHESSLRVPRRPPWNAGMPVEELDNNEKQAFLVWRRS 505 DG VSE+ + +R Q+K+EEA H SSLRVPRRPPWNA M EELD+NE+Q+FL+WRRS Sbjct: 61 DGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEELDDNERQSFLIWRRS 120 Query: 506 LARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREID 685 LARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPLFYRCPDLEAYARE+D Sbjct: 121 LARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAREVD 180 Query: 686 EHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTL 865 +HK T+LLVNKADLLP ++R+KWA++F+ + IL+LFWSAKAA A LEG+ L N + Sbjct: 181 QHKRTMLLVNKADLLPYSVRKKWAEFFNQHEILYLFWSAKAASATLEGRKLGSGWNTNEP 240 Query: 866 QNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIRXXXXXXXXXXXXXXXXXXXXXXXX 1042 QN D DT I+ RD R + R Sbjct: 241 QNGVDDPDTKIYARDELLSRLQYEAERIVERRASSRSDNLSLEGCMNEKSSGSVMV---- 296 Query: 1043 XXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSF 1222 GFVGYPNVGKSSTINALVG KR GVTSTPGKTKHFQTLIISD+L LCDCPGLVFPSF Sbjct: 297 ---GFVGYPNVGKSSTINALVGXKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSF 353 Query: 1223 TTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLA 1402 ++SRYEM+A GVLPIDRMT+HREAVQVVANRVPR IE+VY ITLPKPKPYE Q+RPPLA Sbjct: 354 SSSRYEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITLPKPKPYEPQSRPPLA 413 Query: 1403 AELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPPGMPNKDD-QEVDTLE 1579 +ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PPGM +D QE D Sbjct: 414 SELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPPGMLKEDHIQEEDARS 473 Query: 1580 LGTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXX 1759 S +++DS D E +S +G S E V++ L+SFDI NGL Sbjct: 474 FELSDTHDSDSDDVE-DSNMDGESAPGFEQVVDYLDSFDIANGL-------AKPSITEKK 525 Query: 1760 XXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPLKA 1897 S+KQHKKPQ KK+RSWRVGN+ DGMP ++V QKPINSG LKA Sbjct: 526 PKASHKQHKKPQXKKDRSWRVGNDGGDGMPAVRVLQKPINSGTLKA 571