BLASTX nr result

ID: Coptis24_contig00000104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000104
         (1594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283666.1| PREDICTED: probable salt tolerance-like prot...   299   2e-78
ref|XP_002316844.1| predicted protein [Populus trichocarpa] gi|2...   291   4e-76
ref|XP_003540510.1| PREDICTED: probable salt tolerance-like prot...   286   1e-74
ref|XP_002524543.1| zinc finger protein, putative [Ricinus commu...   280   6e-73
ref|XP_003543187.1| PREDICTED: probable salt tolerance-like prot...   276   8e-72

>ref|XP_002283666.1| PREDICTED: probable salt tolerance-like protein At1g78600 [Vitis
            vinifera] gi|302142816|emb|CBI20111.3| unnamed protein
            product [Vitis vinifera]
          Length = 293

 Score =  299 bits (765), Expect = 2e-78
 Identities = 168/299 (56%), Positives = 196/299 (65%), Gaps = 5/299 (1%)
 Frame = +1

Query: 166  MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 345
            MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL+ +SSSQMPKCDI
Sbjct: 1    MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS-TSSSQMPKCDI 59

Query: 346  CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSSTKEM 525
            CQ+TVGYFFCLEDRALLCRKCDVSIHTANTYVS+HQRFLLTGVKVGLE T+P  SS+   
Sbjct: 60   CQETVGYFFCLEDRALLCRKCDVSIHTANTYVSAHQRFLLTGVKVGLEPTQPGSSSSMGK 119

Query: 526  SNSIG--APAEKLXXXXXXXXXXQNGENNEVLSRQVGVGA---VPAPKLXXXXXXXXXXI 690
            SN +G  +  E               + N+ LS Q G GA   VP              I
Sbjct: 120  SNLVGKHSETESPSASRRGAPMPLTCDYNKTLSIQAG-GAGDFVPTKVSFAGGSGSTESI 178

Query: 691  TDWPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXX 870
              W +D+   L +F+ ++  M++G+SKAD GKLG SD S + + A+E  + DD       
Sbjct: 179  PQWHIDELFGLNEFNQTYDCMDNGTSKADIGKLGDSDCSPTLRAADEELNFDDCLGQVPE 238

Query: 871  XXXXXXXXXXXXTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQRYQPNHTISKYRR 1047
                        TASGL+WPKSS+ S SD SVFVPD+C S  Q       N + +K RR
Sbjct: 239  TTWMVPQISSPPTASGLYWPKSSQIS-SDTSVFVPDICYSPVQ-----MQNESATKCRR 291


>ref|XP_002316844.1| predicted protein [Populus trichocarpa] gi|222859909|gb|EEE97456.1|
            predicted protein [Populus trichocarpa]
          Length = 298

 Score =  291 bits (744), Expect = 4e-76
 Identities = 159/302 (52%), Positives = 193/302 (63%), Gaps = 8/302 (2%)
 Frame = +1

Query: 166  MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 345
            MKIQCNVCEAAEA VLCCADEAALCW CDEKVHAANKLASKHQR+PL+ +SS QMPKCDI
Sbjct: 1    MKIQCNVCEAAEAKVLCCADEAALCWTCDEKVHAANKLASKHQRIPLS-TSSPQMPKCDI 59

Query: 346  CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSSTKEM 525
            CQ+T G+FFCLEDRALLCRKCDV+IHTANT+VS HQRFLLTGVKVGLE T+P  SS+   
Sbjct: 60   CQETAGFFFCLEDRALLCRKCDVAIHTANTHVSVHQRFLLTGVKVGLEPTDPGASSSSGK 119

Query: 526  SNSIGAPAEKLXXXXXXXXXXQNG-------ENNEVLSRQV-GVGAVPAPKLXXXXXXXX 681
            S S     EK           + G         N+V +  V GVG     KL        
Sbjct: 120  SPS----GEKKTLETKSRPVSRRGTLLPLANPCNQVSTVNVCGVGDFGPAKLPYSGGSAT 175

Query: 682  XXITDWPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXX 861
              I+ W +D+FL L +F+ ++G++++GSSKADSGK G SD S   +   E  D ++    
Sbjct: 176  SSISQWHIDEFLDLPEFNQNYGYIDNGSSKADSGKRGDSDCSAILRSTEEEVDDEECLGQ 235

Query: 862  XXXXXXXXXXXXXXXTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQRYQPNHTISKY 1041
                           TASGL+WPKS  N  S+ ++FVPD+CCS  QN    +   T+SK 
Sbjct: 236  VPDSSRAVPQIPSPPTASGLYWPKSFHNH-SETAIFVPDICCSVVQNCHYSEQRGTVSKR 294

Query: 1042 RR 1047
            +R
Sbjct: 295  QR 296


>ref|XP_003540510.1| PREDICTED: probable salt tolerance-like protein At1g78600-like
            isoform 1 [Glycine max]
          Length = 374

 Score =  286 bits (732), Expect = 1e-74
 Identities = 156/287 (54%), Positives = 183/287 (63%), Gaps = 3/287 (1%)
 Frame = +1

Query: 157  VIKMKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPK 336
            V +MKIQCNVCEAAEA VLCCADEA LCW CDEKVHAANKLASKHQRVPL+ +SSS MPK
Sbjct: 80   VERMKIQCNVCEAAEAKVLCCADEAGLCWECDEKVHAANKLASKHQRVPLS-TSSSHMPK 138

Query: 337  CDICQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSST 516
            CDICQ+ +GYFFCLEDRALLCRKCDV+IHTAN YVS HQRFLLTGV+VGLE T+P  SST
Sbjct: 139  CDICQEALGYFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGVRVGLEATDPGASST 198

Query: 517  KEMSNSIGAPAEKLXXXXXXXXXXQNGENNEVLSRQV-GVGAVPAPKLXXXXXXXXXXIT 693
               S+S G                Q    NEVL  +V GVG  P+ K+          I+
Sbjct: 199  SLKSDS-GEKVSDSSVSRKVSTAPQPSNYNEVLPAEVGGVGEFPSAKVSFGGGSTAGNIS 257

Query: 694  DWPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXXX 873
             W +D+F+ L +FS ++ +ME GSS+AD GKLG SD  +   G  E  + DDY       
Sbjct: 258  QWTIDEFIGLNEFSQNYDYME-GSSRADGGKLGDSDSPVLRSGEEEMEEEDDYLERVPDS 316

Query: 874  XXXXXXXXXXXTASGLFWPKSSRN--SPSDNSVFVPDVCCSSPQNFQ 1008
                       T+SGL WPK   N    SD+ +FVPD+  S  Q  Q
Sbjct: 317  SWTVPQIPSPPTSSGLCWPKDHTNLYGSSDSVLFVPDISFSHLQQSQ 363


>ref|XP_002524543.1| zinc finger protein, putative [Ricinus communis]
            gi|223536217|gb|EEF37870.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 290

 Score =  280 bits (717), Expect = 6e-73
 Identities = 153/286 (53%), Positives = 183/286 (63%), Gaps = 3/286 (1%)
 Frame = +1

Query: 166  MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 345
            MKIQCNVCEAAEANVLCCADEAALCW CDEKVHAANKLASKHQRVPL+ +SSS +P CDI
Sbjct: 1    MKIQCNVCEAAEANVLCCADEAALCWGCDEKVHAANKLASKHQRVPLS-TSSSHIPNCDI 59

Query: 346  CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSSTKEM 525
            CQ+T G+FFCLEDRALLCRKCDV+IHTAN YVS HQRFLLTGVKVGLE T+   SS+   
Sbjct: 60   CQETAGFFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGVKVGLEPTDLGASSSSGK 119

Query: 526  SNSIGAPAEKLXXXXXXXXXXQ--NGENNEVLSRQV-GVGAVPAPKLXXXXXXXXXXITD 696
            S S    +E +                +N  L  QV G G V   K+          +  
Sbjct: 120  SPSSEKTSEMISHSVSRRGNPMPVASPHNYALPAQVSGAGEVEQAKV-SYFGGAAGGMPP 178

Query: 697  WPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXXXX 876
            W +D+FL L+DF+ ++G M++GSSKADSGK   S+ S   + A+E  D D+         
Sbjct: 179  WQIDEFLGLSDFNQNYGNMDNGSSKADSGKRSDSESSAFLRSADEEVDGDECLGQVPDSS 238

Query: 877  XXXXXXXXXXTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQRY 1014
                      T+SGL+WPK   N  SD + FVPD+CCS+ QN   Y
Sbjct: 239  WAVPQIPSPPTSSGLYWPKRIHNQ-SDGADFVPDICCSTLQNHHHY 283


>ref|XP_003543187.1| PREDICTED: probable salt tolerance-like protein At1g78600-like
            [Glycine max]
          Length = 293

 Score =  276 bits (707), Expect = 8e-72
 Identities = 153/284 (53%), Positives = 179/284 (63%), Gaps = 3/284 (1%)
 Frame = +1

Query: 166  MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 345
            MKIQCNVCEAAEA VLCCADEAALCW CDEKVHAANKLASKHQRVPL+ +SSS MPKCDI
Sbjct: 1    MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLS-TSSSHMPKCDI 59

Query: 346  CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGS--STK 519
            CQ+ +GYFFCLEDRALLCRKCDV+IHTAN YVS HQRFLLTGV+VGLE  +P  S  S K
Sbjct: 60   CQEALGYFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGVRVGLEAIDPGASLTSLK 119

Query: 520  EMSNSIGAPAEKLXXXXXXXXXXQNGENNEVLSRQV-GVGAVPAPKLXXXXXXXXXXITD 696
              S    +  +            Q    NEVL  +V GVG  P  K+          I+ 
Sbjct: 120  SDSGEKVSDTKSSSVSRKVSTVPQPSNYNEVLPIEVGGVGEFPPAKVSFGGGSTDGNISQ 179

Query: 697  WPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXXXX 876
            W +D+F+ L +FS  + +ME GSS+AD GKLG SD  +   G  +  + DDY        
Sbjct: 180  WTIDEFIGLNEFSQHYDYME-GSSRADGGKLGDSDSPVLKSGEEDMEEEDDYLERVPDSS 238

Query: 877  XXXXXXXXXXTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQ 1008
                      TASGL WPK  + S SD+ +FVPD+  S  Q  Q
Sbjct: 239  WTVPQIPSPPTASGLCWPKDPQYS-SDSVLFVPDISFSLIQQSQ 281


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