BLASTX nr result

ID: Coptis24_contig00000099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000099
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...   423   e-116
ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativ...   409   e-112
ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|s...   406   e-111
ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis l...   406   e-111
gb|AAM63025.1| unknown [Arabidopsis thaliana]                         404   e-110

>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
           unknown [Populus trichocarpa]
           gi|222867000|gb|EEF04131.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score =  423 bits (1087), Expect = e-116
 Identities = 207/275 (75%), Positives = 234/275 (85%), Gaps = 1/275 (0%)
 Frame = -3

Query: 968 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLTKHSSYL 789
           M+SWNSIPLEI+Y+  GWIAFFSWS SFYPQ ++NFRRKSVVGLNFDF+VLNLTKHSSYL
Sbjct: 1   MASWNSIPLEITYETFGWIAFFSWSISFYPQVIMNFRRKSVVGLNFDFVVLNLTKHSSYL 60

Query: 788 IYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFSIHAVLLTGITLIQVLIYDRGSQRV 609
           IYNA L+FS  +Q QY EKYG  EMIPVA NDVAFSIHAVLLT ITL Q++IYDRG+Q+V
Sbjct: 61  IYNASLYFSSAIQHQYFEKYGHGEMIPVAANDVAFSIHAVLLTAITLFQIVIYDRGNQKV 120

Query: 608 SRTCIAISCVVWISAAVCVFVALPSQSWLWLISVFNTIQVFMTVIKYIPQAIMNFSRKST 429
           S+  IA  CVVW+ AAVC F+ALPS SWLWLIS+FN+IQVFMTVIKYIPQ IMNF RKST
Sbjct: 121 SKISIATVCVVWLVAAVCFFIALPSHSWLWLISIFNSIQVFMTVIKYIPQVIMNFMRKST 180

Query: 428 VGWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 249
            G+SIGNILLD LGGVTNY QMA+QSIDQ SWVNFYGNIGKTLLSLVSIFFDL+F+ QHY
Sbjct: 181 DGFSIGNILLDCLGGVTNYAQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMCQHY 240

Query: 248 LLYPSKKEKVSPEADEESTAPLIK-SSQPLQSENV 147
           +LYP  K  V P+ ++E T PLI+ S +P   ENV
Sbjct: 241 ILYPENK-AVPPKLNKEGTEPLIRFSEEPAAPENV 274


>ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativus]
           gi|449483821|ref|XP_004156702.1| PREDICTED: cystinosin
           homolog [Cucumis sativus]
          Length = 274

 Score =  409 bits (1051), Expect = e-112
 Identities = 199/274 (72%), Positives = 232/274 (84%)
 Frame = -3

Query: 968 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLTKHSSYL 789
           M+SWNSIPLEI+YQVLGW AF SWS SFYPQ +LNFRRKSVVGLNFDF++LNLTKHS+YL
Sbjct: 1   MASWNSIPLEITYQVLGWFAFVSWSISFYPQVILNFRRKSVVGLNFDFVLLNLTKHSTYL 60

Query: 788 IYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFSIHAVLLTGITLIQVLIYDRGSQRV 609
           IYNA L+FS  VQKQY +KYG+++MIPVA +DVAFSIHAVLLT ITL QV+IYDRG+Q V
Sbjct: 61  IYNASLYFSSAVQKQYFDKYGYDQMIPVAASDVAFSIHAVLLTAITLFQVVIYDRGTQIV 120

Query: 608 SRTCIAISCVVWISAAVCVFVALPSQSWLWLISVFNTIQVFMTVIKYIPQAIMNFSRKST 429
           S+  + I  VVWI AA+C F+ L S SWLWLIS+FN+IQVFMT IKYIPQAIMNF RKST
Sbjct: 121 SKISLTIVIVVWIFAAICFFIGLSSHSWLWLISIFNSIQVFMTAIKYIPQAIMNFLRKST 180

Query: 428 VGWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 249
            G+SIGNILLD LGG+ NY QMA+QSIDQ SWVNFYGNIGKTLLSL+SIFFDLLF++QHY
Sbjct: 181 DGFSIGNILLDFLGGLANYAQMAVQSIDQNSWVNFYGNIGKTLLSLISIFFDLLFMLQHY 240

Query: 248 LLYPSKKEKVSPEADEESTAPLIKSSQPLQSENV 147
           +LYP K+  VS +AD+++   LI      QSE+V
Sbjct: 241 VLYPGKRPIVSQKADDKTREALIAPPDRPQSEDV 274


>ref|NP_198883.1| cystinosin [Arabidopsis thaliana]
           gi|13124057|sp|P57758.1|CTNS_ARATH RecName:
           Full=Cystinosin homolog gi|9758095|dbj|BAB08539.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15529266|gb|AAK97727.1| AT5g40670/MNF13_190
           [Arabidopsis thaliana] gi|16974419|gb|AAL31135.1|
           AT5g40670/MNF13_190 [Arabidopsis thaliana]
           gi|332007197|gb|AED94580.1| cystinosin [Arabidopsis
           thaliana]
          Length = 270

 Score =  406 bits (1044), Expect = e-111
 Identities = 191/266 (71%), Positives = 223/266 (83%)
 Frame = -3

Query: 968 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLTKHSSYL 789
           M+SWNSIPLEISY+++GWIAF SWS SFYPQ +LNFRR+SVVGLNFDF++LNLTKHSSY+
Sbjct: 1   MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYM 60

Query: 788 IYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFSIHAVLLTGITLIQVLIYDRGSQRV 609
           IYN  L+FSP +QKQY + YG  EMIPVA NDVAFSIHAV++T +TL Q+ IY+RG Q+V
Sbjct: 61  IYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKV 120

Query: 608 SRTCIAISCVVWISAAVCVFVALPSQSWLWLISVFNTIQVFMTVIKYIPQAIMNFSRKST 429
           SR  I I  VVW  AA+C F+ALP+ SWLWLIS+FN+IQVFMT +KYIPQA MNF+RKST
Sbjct: 121 SRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKST 180

Query: 428 VGWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 249
           VGWSIGNILLD  GG+ NY QM +QSIDQ SW NFYGN+GKTLLSL+SIFFD+LF+ QHY
Sbjct: 181 VGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHY 240

Query: 248 LLYPSKKEKVSPEADEESTAPLIKSS 171
           +LYP KK   SPE  EES  PLI SS
Sbjct: 241 VLYPEKKVSKSPETGEESNEPLIDSS 266


>ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316523|gb|EFH46946.1| PQ-loop repeat family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score =  406 bits (1043), Expect = e-111
 Identities = 192/266 (72%), Positives = 222/266 (83%)
 Frame = -3

Query: 968 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLTKHSSYL 789
           M+SWNSIPLEISY+++GWIAF SWS SFYPQ +LNFRRKSVVGLNFDF++LNLTKHSSY+
Sbjct: 1   MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRKSVVGLNFDFVMLNLTKHSSYM 60

Query: 788 IYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFSIHAVLLTGITLIQVLIYDRGSQRV 609
           IYN  L+FSP +QKQY + YG  EMIPVA NDVAFSIHAV++T +TL Q+ IY+RG Q+V
Sbjct: 61  IYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTALTLFQIFIYERGPQKV 120

Query: 608 SRTCIAISCVVWISAAVCVFVALPSQSWLWLISVFNTIQVFMTVIKYIPQAIMNFSRKST 429
           SR  I I  VVW  AA+C F+ALP+ SWLWLIS+FN+IQVFMT +KYIPQA MNF+RKST
Sbjct: 121 SRLAIGIVVVVWAFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKST 180

Query: 428 VGWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 249
           VGWSIGNILLD  GG+ NY QM +QSIDQ SW NFYGNIGKTLLSL+SIFFD+LF+ QHY
Sbjct: 181 VGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNIGKTLLSLISIFFDILFMFQHY 240

Query: 248 LLYPSKKEKVSPEADEESTAPLIKSS 171
           +LYP KK   S E  EES  PLI SS
Sbjct: 241 VLYPEKKASKSLETGEESNEPLIDSS 266


>gb|AAM63025.1| unknown [Arabidopsis thaliana]
          Length = 270

 Score =  404 bits (1038), Expect = e-110
 Identities = 190/266 (71%), Positives = 223/266 (83%)
 Frame = -3

Query: 968 MSSWNSIPLEISYQVLGWIAFFSWSFSFYPQAVLNFRRKSVVGLNFDFLVLNLTKHSSYL 789
           M+SWNSIPLEISY+++GWIAF SWS SFYPQ +LNFRR+SVVGLNFDF++LNLTKHSSY+
Sbjct: 1   MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYM 60

Query: 788 IYNAVLFFSPTVQKQYHEKYGFNEMIPVAPNDVAFSIHAVLLTGITLIQVLIYDRGSQRV 609
           IYN  L+FSP +QKQY + YG  EMIPVA NDVAFSI+AV++T +TL Q+ IY+RG Q+V
Sbjct: 61  IYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSINAVVMTAVTLFQIFIYERGPQKV 120

Query: 608 SRTCIAISCVVWISAAVCVFVALPSQSWLWLISVFNTIQVFMTVIKYIPQAIMNFSRKST 429
           SR  I I  VVW  AA+C F+ALP+ SWLWLIS+FN+IQVFMT +KYIPQA MNF+RKST
Sbjct: 121 SRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKST 180

Query: 428 VGWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHY 249
           VGWSIGNILLD  GG+ NY QM +QSIDQ SW NFYGN+GKTLLSL+SIFFD+LF+ QHY
Sbjct: 181 VGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMCQHY 240

Query: 248 LLYPSKKEKVSPEADEESTAPLIKSS 171
           +LYP KK   SPE  EES  PLI SS
Sbjct: 241 VLYPEKKVSKSPETSEESNEPLIDSS 266


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