BLASTX nr result

ID: Coptis24_contig00000093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000093
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33529.1| expansin [Prunus armeniaca]                            459   e-127
gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|g...   458   e-126
dbj|BAC67190.1| expansin [Pyrus communis]                             447   e-123
dbj|BAH36861.1| alpha expansin [Rosa hybrid cultivar]                 444   e-122
gb|AAM08928.1| expansin 1 [Malus x domestica]                         444   e-122

>gb|AAC33529.1| expansin [Prunus armeniaca]
          Length = 254

 Score =  459 bits (1182), Expect = e-127
 Identities = 213/254 (83%), Positives = 226/254 (88%), Gaps = 1/254 (0%)
 Frame = +3

Query: 150 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYS 326
           MA Q  SLA L  S V+FNLHLHG F DYGGWEGAHATFY              YGNLYS
Sbjct: 1   MAPQALSLAPLALSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYS 60

Query: 327 QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 506
           QGYGTNTAALSTALFNNGLSCGSCYEMRCN+DPRWC PGSI VTATNFCPPN AQSNDNG
Sbjct: 61  QGYGTNTAALSTALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNG 120

Query: 507 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 686
           GWCNPPLQHFDLAEPAFLQIAQYRAGIVPV+FRRVPCMKKGGIR+TINGHSYFNLVLITN
Sbjct: 121 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITN 180

Query: 687 VGGAGDVHSVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 866
           VGGAGDVHSVS+KGSRTGWQPMSRNWGQNWQSN+Y+NGQSLSFQVTTSDGRT+TSYN+AP
Sbjct: 181 VGGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYNVAP 240

Query: 867 ADWQFGKTYQGGQY 908
            +WQFG+T+ GGQ+
Sbjct: 241 GNWQFGQTFSGGQF 254


>gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|gb|AAK48846.1|AF350937_1
           expansin [Prunus cerasus]
          Length = 254

 Score =  458 bits (1179), Expect = e-126
 Identities = 212/254 (83%), Positives = 226/254 (88%), Gaps = 1/254 (0%)
 Frame = +3

Query: 150 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYS 326
           MA Q  SLA L  S V+FNLHLHG F DYGGWEGAHATFY              YGNLYS
Sbjct: 1   MAPQALSLAPLALSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYS 60

Query: 327 QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 506
           QGYGTNTAALSTALFNNGLSCGSCYEMRCN+DPRWC PGSI VTATNFCPPN AQSNDNG
Sbjct: 61  QGYGTNTAALSTALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNG 120

Query: 507 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 686
           GWCNPPLQHFDLAEPAFLQIAQYRAGIVPV+FRRVPCMKKGGIR+TINGHSYFNLVLITN
Sbjct: 121 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITN 180

Query: 687 VGGAGDVHSVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 866
           VGGAGDVHSVS+KGSRTGWQPMSRNWGQNWQSN+Y+NGQSLSFQVTTSDGRT+T+YN+AP
Sbjct: 181 VGGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFQVTTSDGRTVTNYNVAP 240

Query: 867 ADWQFGKTYQGGQY 908
            +WQFG+T+ GGQ+
Sbjct: 241 GNWQFGQTFSGGQF 254


>dbj|BAC67190.1| expansin [Pyrus communis]
          Length = 254

 Score =  447 bits (1149), Expect = e-123
 Identities = 206/254 (81%), Positives = 222/254 (87%), Gaps = 1/254 (0%)
 Frame = +3

Query: 150 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYS 326
           MA    S A +  S V+FNLHLHG+F  YG WEGAHATFY              YGNLYS
Sbjct: 1   MAAHALSFAPIALSVVLFNLHLHGVFAVYGSWEGAHATFYGGGDASGTMGGACGYGNLYS 60

Query: 327 QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 506
           QGYGTNTAALSTALFNNGLSCGSCYEMRC++DPRWC PGSI VTATNFCPPN AQSNDNG
Sbjct: 61  QGYGTNTAALSTALFNNGLSCGSCYEMRCDNDPRWCRPGSIIVTATNFCPPNFAQSNDNG 120

Query: 507 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 686
           GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPC+KKGGIR+TINGHSYFNLVLITN
Sbjct: 121 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITN 180

Query: 687 VGGAGDVHSVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 866
           V GAGDVHSVS+KGSRTGWQPMSRNWGQNWQSNSY+NGQ+LSFQVTTSDGRT+TSYN+AP
Sbjct: 181 VAGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYNVAP 240

Query: 867 ADWQFGKTYQGGQY 908
            +WQFG+T+ GGQ+
Sbjct: 241 GNWQFGQTFSGGQF 254


>dbj|BAH36861.1| alpha expansin [Rosa hybrid cultivar]
          Length = 253

 Score =  444 bits (1143), Expect = e-122
 Identities = 204/253 (80%), Positives = 219/253 (86%)
 Frame = +3

Query: 150 MAIQGCSLALLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYSQ 329
           MA    SLA L   V+FNLH H  F DYGGW G HATFY              YGNLYSQ
Sbjct: 1   MAASALSLAPLALLVLFNLHFHSTFADYGGWNGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 330 GYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNGG 509
           GYGTNTAALSTALFN+GLSCGSCYEMRC++DPRWC PGSI VTATNFCPPN AQ+NDNGG
Sbjct: 61  GYGTNTAALSTALFNDGLSCGSCYEMRCDNDPRWCRPGSIIVTATNFCPPNFAQANDNGG 120

Query: 510 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITNV 689
           WCNPPLQHFDLAEPAFLQIAQYRAGIVPV+FRRVPC+KKGGIR+TINGHSYFNLVLITNV
Sbjct: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNV 180

Query: 690 GGAGDVHSVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAPA 869
           GGAGDVHSVS+KGSRTGWQ MSRNWGQNWQSNSY+NGQ LSFQVTTSDGRT+TSYN+AP 
Sbjct: 181 GGAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQLLSFQVTTSDGRTVTSYNVAPG 240

Query: 870 DWQFGKTYQGGQY 908
           +WQFG+TYQGGQ+
Sbjct: 241 NWQFGQTYQGGQF 253


>gb|AAM08928.1| expansin 1 [Malus x domestica]
          Length = 254

 Score =  444 bits (1142), Expect = e-122
 Identities = 205/254 (80%), Positives = 220/254 (86%), Gaps = 1/254 (0%)
 Frame = +3

Query: 150 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXXYGNLYS 326
           MA    SLA +  S V+FNLHLHG+   YG WEG HATFY              YGNLYS
Sbjct: 1   MAAHPLSLASIALSLVLFNLHLHGVLAVYGSWEGVHATFYGGGDASATMGGACGYGNLYS 60

Query: 327 QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 506
           QGYGTNTAALSTALFNNGLSCGSCYEM CN+DPRWC PGSI VTATNFCPPN A+SNDNG
Sbjct: 61  QGYGTNTAALSTALFNNGLSCGSCYEMMCNNDPRWCRPGSIIVTATNFCPPNFAESNDNG 120

Query: 507 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 686
           GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIR+TINGHSYFNLVLITN
Sbjct: 121 GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLITN 180

Query: 687 VGGAGDVHSVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 866
           V GAGDVHSVS+KGSRTGWQPMSRNWGQNWQSNSY+NGQ+LSFQVTTSDGRT+TSYN+AP
Sbjct: 181 VAGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYNVAP 240

Query: 867 ADWQFGKTYQGGQY 908
            +WQFG+T+ GGQ+
Sbjct: 241 GNWQFGQTFSGGQF 254


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