BLASTX nr result

ID: Coptis24_contig00000082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000082
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283189.1| PREDICTED: protein AIG2-like [Vitis vinifera]     219   4e-55
emb|CBI20800.3| unnamed protein product [Vitis vinifera]              219   4e-55
ref|XP_002330829.1| predicted protein [Populus trichocarpa] gi|2...   210   3e-52
ref|XP_002527994.1| Protein AIG2, putative [Ricinus communis] gi...   207   2e-51
ref|XP_002438966.1| hypothetical protein SORBIDRAFT_10g029140 [S...   205   1e-50

>ref|XP_002283189.1| PREDICTED: protein AIG2-like [Vitis vinifera]
          Length = 185

 Score =  219 bits (559), Expect = 4e-55
 Identities = 103/165 (62%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
 Frame = +1

Query: 106 PQSSHIVFVYGSLLADEVVSVILKRVPHSSPAILDGYRRFSVEGRVYPAITPVEDKKVNG 285
           PQ+ H VFVYGSLLADEVV+V+L RVP SS A+L  + RFS++GRVYPAI PVE+KKV G
Sbjct: 19  PQNLHAVFVYGSLLADEVVAVLLNRVPQSSAAVLHNFHRFSIKGRVYPAILPVENKKVTG 78

Query: 286 KVLFGITDPELDLLDAFEDVEYERNTVDAFLIDTCERVQTYTYVWKEKNDPHLYGDWDIE 465
           +VL G+TDPEL++LD FEDVEY+R TV+  L+D  E++Q  TYVW+  ND +LYGDWD E
Sbjct: 79  RVLLGVTDPELNILDTFEDVEYDRRTVEVSLMDGPEKLQAKTYVWRNSNDTNLYGDWDFE 138

Query: 466 AWRQVHMSDFLKMTTGFIEEFEGLESKPRVATYEEFFHQ-AESPP 597
            W+ VHM +F+KMT  F+EE E  ES PRV TYE FF Q +++PP
Sbjct: 139 QWKGVHMENFVKMTMSFVEELELPESMPRVTTYETFFQQGSDNPP 183


>emb|CBI20800.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  219 bits (559), Expect = 4e-55
 Identities = 103/165 (62%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
 Frame = +1

Query: 106 PQSSHIVFVYGSLLADEVVSVILKRVPHSSPAILDGYRRFSVEGRVYPAITPVEDKKVNG 285
           PQ+ H VFVYGSLLADEVV+V+L RVP SS A+L  + RFS++GRVYPAI PVE+KKV G
Sbjct: 8   PQNLHAVFVYGSLLADEVVAVLLNRVPQSSAAVLHNFHRFSIKGRVYPAILPVENKKVTG 67

Query: 286 KVLFGITDPELDLLDAFEDVEYERNTVDAFLIDTCERVQTYTYVWKEKNDPHLYGDWDIE 465
           +VL G+TDPEL++LD FEDVEY+R TV+  L+D  E++Q  TYVW+  ND +LYGDWD E
Sbjct: 68  RVLLGVTDPELNILDTFEDVEYDRRTVEVSLMDGPEKLQAKTYVWRNSNDTNLYGDWDFE 127

Query: 466 AWRQVHMSDFLKMTTGFIEEFEGLESKPRVATYEEFFHQ-AESPP 597
            W+ VHM +F+KMT  F+EE E  ES PRV TYE FF Q +++PP
Sbjct: 128 QWKGVHMENFVKMTMSFVEELELPESMPRVTTYETFFQQGSDNPP 172


>ref|XP_002330829.1| predicted protein [Populus trichocarpa] gi|222872631|gb|EEF09762.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  210 bits (534), Expect = 3e-52
 Identities = 98/162 (60%), Positives = 121/162 (74%)
 Frame = +1

Query: 118 HIVFVYGSLLADEVVSVILKRVPHSSPAILDGYRRFSVEGRVYPAITPVEDKKVNGKVLF 297
           H VFVYGSLLAD+VV  +L R+P SSPAIL+GY RFS++GRVYPAI PVE+KKV+GKVL 
Sbjct: 11  HNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLH 70

Query: 298 GITDPELDLLDAFEDVEYERNTVDAFLIDTCERVQTYTYVWKEKNDPHLYGDWDIEAWRQ 477
           GITDPEL +LD +EDVEYER TVD  L+D   + Q   YVW +KNDP+LYG+WD E W++
Sbjct: 71  GITDPELYILDEYEDVEYERVTVDVSLMDNSNKTQALAYVWSDKNDPNLYGEWDFEEWKR 130

Query: 478 VHMSDFLKMTTGFIEEFEGLESKPRVATYEEFFHQAESPPTL 603
             M DF KM+  F ++ E  ESK R+ATYE F+ Q    P +
Sbjct: 131 TQMEDFAKMSAEFRQDLEQPESKTRIATYESFYQQDGGRPLM 172


>ref|XP_002527994.1| Protein AIG2, putative [Ricinus communis]
           gi|223532620|gb|EEF34406.1| Protein AIG2, putative
           [Ricinus communis]
          Length = 178

 Score =  207 bits (528), Expect = 2e-51
 Identities = 100/163 (61%), Positives = 126/163 (77%), Gaps = 6/163 (3%)
 Frame = +1

Query: 118 HIVFVYGSLLADEVVSVILKRVPHSSPAILDGYRRFSVEGRVYPAITPVEDKK--VNGKV 291
           H VFVYGSLL +++V V+LKRVP SSPA+L G+ RFS++GRVYPAI PV +    V GKV
Sbjct: 8   HRVFVYGSLLEEDIVRVLLKRVPRSSPAVLHGFHRFSIKGRVYPAILPVSNNSSHVAGKV 67

Query: 292 LFGITDPELDLLDAFEDVEYERNTVDAFLID----TCERVQTYTYVWKEKNDPHLYGDWD 459
           LFGI+DPEL +LD FEDVEY+R TVD  L+D    + + +Q +TYVW+ K DP L+G+WD
Sbjct: 68  LFGISDPELRILDIFEDVEYQRTTVDVSLMDGGRSSSQILQAHTYVWENKTDPDLFGEWD 127

Query: 460 IEAWRQVHMSDFLKMTTGFIEEFEGLESKPRVATYEEFFHQAE 588
            E W++ HM+DFLKM+ GF+EE E  ESKPRVATY+ FFHQ E
Sbjct: 128 FEEWKKAHMNDFLKMSIGFMEELELPESKPRVATYQAFFHQDE 170


>ref|XP_002438966.1| hypothetical protein SORBIDRAFT_10g029140 [Sorghum bicolor]
           gi|241917189|gb|EER90333.1| hypothetical protein
           SORBIDRAFT_10g029140 [Sorghum bicolor]
          Length = 181

 Score =  205 bits (521), Expect = 1e-50
 Identities = 95/163 (58%), Positives = 118/163 (72%)
 Frame = +1

Query: 106 PQSSHIVFVYGSLLADEVVSVILKRVPHSSPAILDGYRRFSVEGRVYPAITPVEDKKVNG 285
           P ++H VFVYGSL+ADEVV  ILKRVP ++PA+L  Y RF+++GR+YPAI PVE KKV G
Sbjct: 11  PAAAHTVFVYGSLMADEVVRTILKRVPPAAPALLPNYHRFNIKGRIYPAILPVESKKVAG 70

Query: 286 KVLFGITDPELDLLDAFEDVEYERNTVDAFLIDTCERVQTYTYVWKEKNDPHLYGDWDIE 465
            V+ G+TD EL LLDAFEDVEY R  V+  L D+ E++    YVW +  DP+LYG+WD E
Sbjct: 71  MVITGVTDEELQLLDAFEDVEYTRTRVEISLTDSLEKILADAYVWSDAEDPNLYGEWDFE 130

Query: 466 AWRQVHMSDFLKMTTGFIEEFEGLESKPRVATYEEFFHQAESP 594
            W+++HM DFL MT GF+ E E  ESK RV TYE F  Q E P
Sbjct: 131 EWKKLHMKDFLAMTNGFMHELEQPESKTRVETYESFMQQQEQP 173


Top