BLASTX nr result

ID: Coptis24_contig00000065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000065
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264042.1| PREDICTED: protochlorophyllide reductase, ch...   592   e-167
ref|XP_002264000.1| PREDICTED: protochlorophyllide reductase, ch...   592   e-166
ref|XP_002534245.1| short-chain dehydrogenase, putative [Ricinus...   590   e-166
ref|XP_002284769.2| PREDICTED: protochlorophyllide reductase, ch...   589   e-166
ref|XP_002329146.1| predicted protein [Populus trichocarpa] gi|2...   588   e-165

>ref|XP_002264042.1| PREDICTED: protochlorophyllide reductase, chloroplastic isoform 2
            [Vitis vinifera] gi|297739124|emb|CBI28775.3| unnamed
            protein product [Vitis vinifera]
          Length = 399

 Score =  592 bits (1527), Expect = e-167
 Identities = 299/401 (74%), Positives = 334/401 (83%)
 Frame = +3

Query: 126  LLVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 305
            + + A S+L SA+SIHKEG SNASLK+TGF  +S+S+HLK++    + K+K  L  RKL 
Sbjct: 1    MALQAASLLPSAVSIHKEGKSNASLKETGFFEVSVSDHLKAELSLGLSKNKE-LKRRKLP 59

Query: 306  VSTVXXXXXXXXXXXXXXXXXGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 485
            V  +                 G+KTLR G+V+ITGASSGLGLATAKALAET KWH+IMAC
Sbjct: 60   VGVIRAQTATTPAISQASPE-GKKTLRKGNVIITGASSGLGLATAKALAETEKWHIIMAC 118

Query: 486  RDYLKTERAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFGRSGRPLDALVCNAAVYQPT 665
            R++LK +RAAKSAGIAKENYT+MHLDL+SL+SV+QF DNF RSGRPLD LVCNAAVY PT
Sbjct: 119  RNFLKADRAAKSAGIAKENYTVMHLDLASLESVRQFADNFRRSGRPLDVLVCNAAVYLPT 178

Query: 666  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 845
            AKEP+FTA+GFELSVGTNHLGHF          KQ+DYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 179  AKEPTFTAEGFELSVGTNHLGHFLLSRLLLDDLKQTDYPSKRLIIVGSITGNTNTLAGNV 238

Query: 846  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 1025
            PPKANLGDLRG            MIDGG FDGAKAYKDSKVCNMLTMQEFHRRYHE+TGI
Sbjct: 239  PPKANLGDLRGLAGGLNGINGSPMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGI 298

Query: 1026 TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1205
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKG+VSEEE+GKRLAQVV+DPSLTKS
Sbjct: 299  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVTDPSLTKS 358

Query: 1206 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1328
            GVYWSWNK+SASF+NQLSQEASD EKARK+W+ISEKLVGLA
Sbjct: 359  GVYWSWNKNSASFQNQLSQEASDAEKARKVWEISEKLVGLA 399


>ref|XP_002264000.1| PREDICTED: protochlorophyllide reductase, chloroplastic isoform 1
            [Vitis vinifera]
          Length = 397

 Score =  592 bits (1525), Expect = e-166
 Identities = 299/401 (74%), Positives = 333/401 (83%)
 Frame = +3

Query: 126  LLVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 305
            + + A S+L SA+SIHKEG SNASLK+TGF  +S+S+HLK++     L S + L  RKL 
Sbjct: 1    MALQAASLLPSAVSIHKEGKSNASLKETGFFEVSVSDHLKAELS---LASLQELKRRKLP 57

Query: 306  VSTVXXXXXXXXXXXXXXXXXGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 485
            V  +                 G+KTLR G+V+ITGASSGLGLATAKALAET KWH+IMAC
Sbjct: 58   VGVIRAQTATTPAISQASPE-GKKTLRKGNVIITGASSGLGLATAKALAETEKWHIIMAC 116

Query: 486  RDYLKTERAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFGRSGRPLDALVCNAAVYQPT 665
            R++LK +RAAKSAGIAKENYT+MHLDL+SL+SV+QF DNF RSGRPLD LVCNAAVY PT
Sbjct: 117  RNFLKADRAAKSAGIAKENYTVMHLDLASLESVRQFADNFRRSGRPLDVLVCNAAVYLPT 176

Query: 666  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 845
            AKEP+FTA+GFELSVGTNHLGHF          KQ+DYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 177  AKEPTFTAEGFELSVGTNHLGHFLLSRLLLDDLKQTDYPSKRLIIVGSITGNTNTLAGNV 236

Query: 846  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 1025
            PPKANLGDLRG            MIDGG FDGAKAYKDSKVCNMLTMQEFHRRYHE+TGI
Sbjct: 237  PPKANLGDLRGLAGGLNGINGSPMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGI 296

Query: 1026 TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1205
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKG+VSEEE+GKRLAQVV+DPSLTKS
Sbjct: 297  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVTDPSLTKS 356

Query: 1206 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1328
            GVYWSWNK+SASF+NQLSQEASD EKARK+W+ISEKLVGLA
Sbjct: 357  GVYWSWNKNSASFQNQLSQEASDAEKARKVWEISEKLVGLA 397


>ref|XP_002534245.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223525646|gb|EEF28135.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 396

 Score =  590 bits (1521), Expect = e-166
 Identities = 297/398 (74%), Positives = 329/398 (82%)
 Frame = +3

Query: 135  MATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLSVST 314
            MA+S++SS   + KEG S+AS KD+   G+SLS+HLK+D      + KR  N R  +V  
Sbjct: 1    MASSLVSSTFVVLKEGKSSASFKDSSLFGVSLSDHLKADHSSSAFRFKREPNQRVGAVRA 60

Query: 315  VXXXXXXXXXXXXXXXXXGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMACRDY 494
                              G+KTLR GSV++TGASSGLGLATAKALAETGKWH+IMACRD+
Sbjct: 61   --QTMATASPAVNRAAPEGKKTLRKGSVIVTGASSGLGLATAKALAETGKWHIIMACRDF 118

Query: 495  LKTERAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFGRSGRPLDALVCNAAVYQPTAKE 674
            LKTERAAKSAGI+KENYTIMHLDL+SLDSV+QFVDNF RSGRPLD LVCNAAVY PTAKE
Sbjct: 119  LKTERAAKSAGISKENYTIMHLDLASLDSVRQFVDNFKRSGRPLDVLVCNAAVYLPTAKE 178

Query: 675  PSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPPK 854
            P+FTA+GFELSVGTNHLGHF          ++SDYPSKRLIIVGSITGNTNTLAGNVPPK
Sbjct: 179  PTFTAEGFELSVGTNHLGHFLLSRLLLEDLQKSDYPSKRLIIVGSITGNTNTLAGNVPPK 238

Query: 855  ANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITFA 1034
            ANLGD+RG           AMIDGGNFDGAKAYKDSKVCNML MQEFHRR+HE+TGITFA
Sbjct: 239  ANLGDMRGLAGGLNGLNSSAMIDGGNFDGAKAYKDSKVCNMLIMQEFHRRFHEETGITFA 298

Query: 1035 SLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKSGVY 1214
            SLYPGCIATTGLFREHIPLFR LFPPFQKYITKG+VSE+E+GKRLAQVVSDPSLTKSGVY
Sbjct: 299  SLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVY 358

Query: 1215 WSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1328
            WSWNKDSASFENQLSQEASD +KARK+W+ISEKLVGLA
Sbjct: 359  WSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 396


>ref|XP_002284769.2| PREDICTED: protochlorophyllide reductase, chloroplastic-like [Vitis
            vinifera] gi|302143044|emb|CBI20339.3| unnamed protein
            product [Vitis vinifera]
          Length = 396

 Score =  589 bits (1518), Expect = e-166
 Identities = 296/401 (73%), Positives = 330/401 (82%)
 Frame = +3

Query: 126  LLVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 305
            + + A +++ SA SI KEG  +AS K++G  G+SLS+H+K+DF    L++KR     K S
Sbjct: 1    MAMQAAALVPSAFSIPKEGKGSASFKESGLFGVSLSDHVKADFSSSALRNKR-----KPS 55

Query: 306  VSTVXXXXXXXXXXXXXXXXXGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 485
            V  +                 G+KTLR G+VVITGASSGLGLAT KALAETGKWH+IMAC
Sbjct: 56   VGAIRAQTAATTPAITRATPEGKKTLRKGTVVITGASSGLGLATTKALAETGKWHIIMAC 115

Query: 486  RDYLKTERAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFGRSGRPLDALVCNAAVYQPT 665
            RD+LK ERAA+SAG++KENYT+MHLDL+SLDSV+QFVDNF RS RPLD LVCNAAVY PT
Sbjct: 116  RDFLKAERAARSAGLSKENYTVMHLDLASLDSVRQFVDNFKRSERPLDVLVCNAAVYLPT 175

Query: 666  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 845
            AKEP+FTADGFELSVGTNHLGHF          KQSDYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 176  AKEPTFTADGFELSVGTNHLGHFLLARLLLDDLKQSDYPSKRLIIVGSITGNTNTLAGNV 235

Query: 846  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 1025
            PPKANLGDLRG           AMIDGG FDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI
Sbjct: 236  PPKANLGDLRGMAGGLNGLNSSAMIDGGAFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 295

Query: 1026 TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1205
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQK+ITKG+VSEEESGKRLAQVVS+PSLTKS
Sbjct: 296  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGYVSEEESGKRLAQVVSEPSLTKS 355

Query: 1206 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1328
            GVYWSWNK+SASFENQLSQEASD +KARK+W++SEKLV LA
Sbjct: 356  GVYWSWNKNSASFENQLSQEASDADKARKVWELSEKLVRLA 396


>ref|XP_002329146.1| predicted protein [Populus trichocarpa] gi|222869815|gb|EEF06946.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  588 bits (1516), Expect = e-165
 Identities = 299/401 (74%), Positives = 328/401 (81%)
 Frame = +3

Query: 126  LLVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 305
            + + A S++SSA  + KEG S+ASLK++  LG+SLS+H+K+DF    LK KR  N R  +
Sbjct: 1    MALQAASLVSSAFVVPKEGKSSASLKESSLLGVSLSDHVKADFSSSTLKWKREFNQRVRT 60

Query: 306  VSTVXXXXXXXXXXXXXXXXXGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 485
            V                    G+KTLR G  ++TGASSGLGLA AKALAETGKWHVIMAC
Sbjct: 61   VRA--QSMATATPAVNRASSDGKKTLRQGCCIVTGASSGLGLAAAKALAETGKWHVIMAC 118

Query: 486  RDYLKTERAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFGRSGRPLDALVCNAAVYQPT 665
            RD+LK ERAAKSAGIAKEN TIMHLDL+SLDSV+QFVD F RSGR LD LVCNAAVY PT
Sbjct: 119  RDFLKAERAAKSAGIAKENCTIMHLDLASLDSVRQFVDTFKRSGRALDVLVCNAAVYLPT 178

Query: 666  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 845
            AKEP+FTA+GFELSVGTNHLGHF          K+SDYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 179  AKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDMKKSDYPSKRLIIVGSITGNTNTLAGNV 238

Query: 846  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 1025
            PPKANLGDLRG           AMIDGG FDGAKAYKDSKVCNMLTMQEFHRR+HE+TGI
Sbjct: 239  PPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRFHEETGI 298

Query: 1026 TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1205
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEE++GKRLAQVVSDPSLTKS
Sbjct: 299  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEDAGKRLAQVVSDPSLTKS 358

Query: 1206 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1328
            GVYWSWNKDSASFENQLSQEASD EKARK+W++SEKLVGLA
Sbjct: 359  GVYWSWNKDSASFENQLSQEASDEEKARKVWEVSEKLVGLA 399


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