BLASTX nr result
ID: Coptis24_contig00000062
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000062 (4248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 1409 0.0 ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica... 1223 0.0 ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP... 1221 0.0 ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 1144 0.0 ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica... 1140 0.0 >ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis vinifera] Length = 1414 Score = 1409 bits (3646), Expect = 0.0 Identities = 785/1334 (58%), Positives = 940/1334 (70%), Gaps = 11/1334 (0%) Frame = -2 Query: 4217 STKNDDSNAFVLPGXXXXXXXXXKQDNLK----KKPALSNSEKRXXXXXXXXXXXXXXQS 4050 S+K DDSNA +LP KQ++ K K LS S+KR S Sbjct: 97 SSKGDDSNAIILPEKKGKKRKGMKQEHEKFKTNKTRKLSASQKRKLKKLEEEKEKSLLLS 156 Query: 4049 ESIKTLQKYQIREDAYSLLKSSGNIGQVETKREKRERAAQFSKIGLDVPNDDQPSKKRRK 3870 +SI+TL+KY+IREDA+SLL+SS N+GQVET EKR RA +FSK GL++P+ D+P K + Sbjct: 157 KSIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQ-- 214 Query: 3869 DGDFCETESDVDKGQWKLE-DRPNNVLQLVLGEEDLDNACLSSDTNQMIICSNILDKNSE 3693 DG E E D +K Q K E D + + ++ E L NA +S ++CS L NS Sbjct: 215 DG---EMEPDSNKIQSKQEFDESDAMWPRMVQREVLSNASISLGFTSELVCSTELAVNSR 271 Query: 3692 -SATSSAKECFVINSKSMQDDKKKPSLIHCNYKRRESTEPKDVELVSAKADCNNSSIHVD 3516 S T AKE N + D++ + +++ + KDV + + +S D Sbjct: 272 HSPTLPAKEVSEKNYDTSMQDRRNSTPTSTTADGQKNIKSKDVPDWNLNLNFRGTSNLPD 331 Query: 3515 NAVQRPVISPTVVHVSRPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQ 3336 ++Q P+ +PTVVHVSRP EVE NRKDLP EAIN+ + VIICGETGCGKTTQ Sbjct: 332 CSLQ-PITTPTVVHVSRPTEVENNRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQ 390 Query: 3335 VPQFLYEAGFGSSKTSVRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRK 3156 VPQFLYEAGFGS + SV+SGIIGVTQPRRVAVLATAKRVAFELGL LGKEVGFQVRHD+ Sbjct: 391 VPQFLYEAGFGSKQASVQSGIIGVTQPRRVAVLATAKRVAFELGLSLGKEVGFQVRHDKM 450 Query: 3155 IGDNCSIKFMTDGILLREVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRM 2976 IGD+CSIKFMTDGILLREVQ+DF L+RYSVIILDEAHERSLNTDILIGMLSRVIQVRQ++ Sbjct: 451 IGDSCSIKFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQKL 510 Query: 2975 YQEQHEKVLSGVYVSPENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPV 2796 Y+EQ + +LSGV +SPE+++ LKLVLMSATLRVEDF+S R+LF PPPVIEV +RQFPV Sbjct: 511 YEEQQQMMLSGVRISPESMVPQLKLVLMSATLRVEDFISGRRLFHTPPPVIEVPSRQFPV 570 Query: 2795 RLYHTKKTDPNPEEDYLAQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEEL 2616 ++ +K+T+ DY+ QAYKK+++IHK+LP GGILVFVTGQREVEYLC KLRKAS EL Sbjct: 571 TIHFSKRTEI---VDYIGQAYKKILSIHKKLPQGGILVFVTGQREVEYLCQKLRKASREL 627 Query: 2615 SYLSSKRKTENEVTLTSEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXX 2436 SSK+ NEVT SE NS V G+D+++I+EAFE +QQ D+F+ Sbjct: 628 MLNSSKQNIGNEVTAVSEMNS-VGGIDIEEINEAFEIQGNSANQQTDRFSIYDEDHGDLD 686 Query: 2435 XXXXXXSPNSGKESDLTINXXXXXXXXXXXXXXXXXXDSGFLENGGKHVDVLGEPSSLSA 2256 S +S ES+ + E+ G VD+LGE SL++ Sbjct: 687 EDDSDSSYDSETESEWEVLGDDGNPLDLKTS-----------EDDGNLVDILGEDRSLAS 735 Query: 2255 LKAAFESLAGKHPPNADSDVLDISDPPSTKG-CSISPPFVAEEKPRGPSVPCAGGLHVLP 2079 LKAAF++LAGK N +S ++ P T G CS +K G + AG L VLP Sbjct: 736 LKAAFDALAGKTAINHNSKGEEVV--PDTPGRCSDQSNPNMGKKRDGENDLSAGALCVLP 793 Query: 2078 LYAMLPAAAQLRVFDKVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYNSTNGM 1899 LYAMLPAAAQLRVF+++KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK Y+ +NGM Sbjct: 794 LYAMLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDHSNGM 853 Query: 1898 EEYKVQWISKXXXXXXXXXXXXXGPGYCYRLYSKAAFSNIFLEFSTAEISKIPVDGVVLL 1719 E Y+VQWISK GPG+CYRLYS A F+NI +FS AEI K+PV+GV+LL Sbjct: 854 ETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILPDFSMAEILKVPVEGVILL 913 Query: 1718 MKSMGIDKVANXXXXXXXXXXXXXXXERCLKSLEALDNFGRLSLLGKAMAQYPMSPRHSR 1539 MKSM IDKVAN ERCLK+LEAL++ GRL+ LGKAMA YPMSPRHSR Sbjct: 914 MKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRLTPLGKAMAHYPMSPRHSR 973 Query: 1538 MLLTVIQILAKVQGYAKVNLVFGYXXXXXXALSLSNPFIMQSGGSGGDKNDLQQNENSGT 1359 MLLTVIQI+ K +GYA+ NLV GY ALSL NPF+MQ G+ + L Q E + T Sbjct: 974 MLLTVIQIMRKAKGYARANLVLGYAVAAAAALSLPNPFVMQFEGNHTRNDGLDQVEKANT 1033 Query: 1358 SGTQKRLDQXXXXXXXXXXXXXXXARAKFCNPSSDALSIAYALQLFELAESPVEFCNENA 1179 T + +D+ +RAKF NPSSDAL++AYALQ FEL+ SPVEFCNEN Sbjct: 1034 PVTDEIVDKQDKLKKKKLKETAKVSRAKFSNPSSDALTVAYALQCFELSGSPVEFCNENV 1093 Query: 1178 LFFKTMEEMSKLRKQLLRLVFHQKST---HQEFLWTHGPLEDVEQAWRVSSDKHPLSMYE 1008 + KT+EEMSKLRKQLL+LVF+Q + H+EF W HG +ED E AWRVSSDKHPLS+ E Sbjct: 1094 MHLKTLEEMSKLRKQLLQLVFNQSTIGALHEEFSWPHGTMEDTEHAWRVSSDKHPLSLNE 1153 Query: 1007 EELLGQAICAGWADRVARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSP 828 EELLGQAICAGWADRVA+ R +SGS++GDRKA A RYQACMVKETVFLHRWSS+ARS+P Sbjct: 1154 EELLGQAICAGWADRVAKRTRAISGSSEGDRKAKAARYQACMVKETVFLHRWSSLARSAP 1213 Query: 827 EFLVYSELLQTKRPYMHGVTSVKADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWAR 651 EFLVYSELLQTKRPYMHGVT+VK DWLVKYA LC+F+ LTDPKPYY+PL DQV CW Sbjct: 1214 EFLVYSELLQTKRPYMHGVTNVKPDWLVKYAAPLCSFSAPLTDPKPYYEPLADQVFCWVI 1273 Query: 650 PLFGPHLWELPLHTLPIKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAES 471 P FGPHLW LPLH +PI SD+ QRV+ FA ALLEGQVLPCL SV++++AAPPASILR E+ Sbjct: 1274 PTFGPHLWRLPLHGVPI-SDNAQRVSVFAYALLEGQVLPCLGSVRKYMAAPPASILRPEA 1332 Query: 470 LGQRRVGNLLNKLGGRSKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQM 291 LGQRRVGNLL+KL R K IDS ML+E W +NP EL SEILDWFQE +FE LW QM Sbjct: 1333 LGQRRVGNLLSKLKSRPKTIDSCLMLREAWRENPRELHSEILDWFQETFHKQFEVLWSQM 1392 Query: 290 HREVLLDPQELYPK 249 H EVLLDPQE +PK Sbjct: 1393 HLEVLLDPQERFPK 1406 >ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis sativus] Length = 1333 Score = 1223 bits (3165), Expect = 0.0 Identities = 712/1318 (54%), Positives = 884/1318 (67%), Gaps = 22/1318 (1%) Frame = -2 Query: 4136 LKKKPALSNSEKRXXXXXXXXXXXXXXQSESIKTLQKYQIREDAYSLLKSSGNIGQVETK 3957 L KKP LS S+KR S+S++TL+KY+I +DA+ LL+SS NIG+ ET+ Sbjct: 50 LNKKPKLSKSQKRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETR 109 Query: 3956 REKRERAAQFSKIGLDVPNDDQPSKKRRKDGDFCETES---DVDKGQWKL----EDRP-- 3804 EKR R QFSK+G++VP +DQ K D E+ D+ ED P Sbjct: 110 LEKRSRDIQFSKVGIEVPGNDQQLDKTSSDISQYESHCGSLDISPCHQLSANADEDGPFV 169 Query: 3803 --NNVLQLVLGEEDLDNACLSSDTNQMIICSNILDKNSESATSSAKE-----CFVINSKS 3645 V + + +DLDN + + + + S++ DK + ++ C + Sbjct: 170 AEKEVTRGLDSFKDLDNDTIVPNDGKSL--SSLPDKVENTGAVLLEDERDLSCTMCTVGG 227 Query: 3644 MQDDKKKPSLIHCN-YKRRESTEPKDVELVSAKADCNNSSIHVDNAVQRPVISPTVVHVS 3468 ++ + ++ N K +E PK VE+ C S++ + R + P VV VS Sbjct: 228 FKEPEIMELIVGLNGLKDKEDGIPK-VEI------CTTSNLLPE---MRLLSKPIVVPVS 277 Query: 3467 RPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQVPQFLYEAGFGSSKTS 3288 RP EVE+ RKDLP EAINE VIICGETGCGKTTQVPQFLYEAGFGSS++S Sbjct: 278 RPCEVEDKRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSSQSS 337 Query: 3287 VRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKIGDNCSIKFMTDGILL 3108 + G IGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+KIGD SIKFMTDGILL Sbjct: 338 HQRGAIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGDTSSIKFMTDGILL 397 Query: 3107 REVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRMYQEQHEKVLSGVYVSP 2928 REVQ DFLLKRYSV+ILDEAHERS+NTDILIGMLSRV+++RQ ++ +Q + LSG +SP Sbjct: 398 REVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQRQLTLSGGKISP 457 Query: 2927 ENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPVRLYHTKKTDPNPEEDY 2748 EN+I PLKLVLMSATLRVEDFVS +LF PP+IEV RQFPV ++ +K+TD DY Sbjct: 458 ENMIFPLKLVLMSATLRVEDFVSGGRLFHVSPPIIEVPTRQFPVTVHFSKRTD---IVDY 514 Query: 2747 LAQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEELSYLSSKRKTENEVTLT 2568 + QAYKKV+ IHK+LPPGGILVFVTGQREVE LC KLR+AS++L +S+R EN + Sbjct: 515 IGQAYKKVMAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIKKTSERHGENNNGIV 574 Query: 2567 SEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXXXXXXXXSPNSGKESDL 2388 E NSI Q LDM +I+EAFE+H+ F+ +Q D+F+ S NS +S+L Sbjct: 575 -EMNSI-QNLDMNEINEAFEDHE-FSIEQTDRFSSFDKDEFDINDDVSDASYNSESDSEL 631 Query: 2387 TINXXXXXXXXXXXXXXXXXXDSGFLENGGKHVDVLGEPSSLSALKAAFESLAGKHPPNA 2208 N E G DV+ + +S+S+LKAAF++L K+ + Sbjct: 632 EFNEDAMSD-----------------ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDL 674 Query: 2207 DSDVLDISDPPSTKGCSISPPFVAEEKPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKV 2028 D +D + + E G SV G LHVLPLYAMLPAAAQLRVF++V Sbjct: 675 DKRQVDHTTDEDLSSKQCVSARLKENVEFGFSV---GALHVLPLYAMLPAAAQLRVFEEV 731 Query: 2027 KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXX 1848 KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK YNS+NG+E Y+VQWISK Sbjct: 732 KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRA 791 Query: 1847 XXXXXXGPGYCYRLYSKAAFSNIFLEFSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXX 1668 GPG+CYRLYS A FSN +FS AEI+KIPVDGVVLLMKSMGI KV N Sbjct: 792 GRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTP 851 Query: 1667 XXXXXXXXXERCLKSLEALDNFGRLSLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAK 1488 E CLK+LEALD+ GRL+ LGKAMAQYP+SPRHSRMLLTVIQI+ ++ Y + Sbjct: 852 PETSAVLEAESCLKALEALDSGGRLTALGKAMAQYPLSPRHSRMLLTVIQIMRNLKNYDR 911 Query: 1487 VNLVFGYXXXXXXALSLSNPFIMQSGGSGGDKNDLQQNENS-GTSGTQKRLDQXXXXXXX 1311 NLV Y ALS+SNPF+M GS ++++QN+ S G + T++++++ Sbjct: 912 ANLVLAYSVAAAAALSMSNPFVMMFEGS-QINDEVEQNDRSFGDTKTEEKVEK---SLKK 967 Query: 1310 XXXXXXXXARAKFCNPSSDALSIAYALQLFELAESPVEFCNENALFFKTMEEMSKLRKQL 1131 +R KF + SSDAL++AYALQ FE +E+PV FCN L KTM+EMSKLRKQL Sbjct: 968 KLKEAGKLSREKFSDHSSDALTVAYALQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQL 1027 Query: 1130 LRLVF-HQKST--HQEFLWTHGPLEDVEQAWRVSSDKHPLSMYEEELLGQAICAGWADRV 960 L+LVF H +S+ EF WT+G LEDVE WRV S+KHPLS+ E+E++GQAICAGW DRV Sbjct: 1028 LKLVFNHSRSSIAESEFSWTNGVLEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDRV 1087 Query: 959 ARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLVYSELLQTKRPYM 780 A+ R +S S + DRK A +YQACMVKE VF++RWSSV+RS+P+FLVY+ELL+TKRPYM Sbjct: 1088 AKRIREISKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLVYNELLRTKRPYM 1147 Query: 779 HGVTSVKADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWARPLFGPHLWELPLHTLP 603 HG+TSV+ DWLVKYA SLC F+ LTDPKPYYD D V W P FGPHLWELPLH +P Sbjct: 1148 HGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNVP 1207 Query: 602 IKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQRRVGNLLNKLGGR 423 IK D+ Q VA FACALL+G+VLPCL SV +FLAA P+SILR E+LGQ+RVGNLL+KL R Sbjct: 1208 IK-DNAQGVAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGQKRVGNLLSKL--R 1264 Query: 422 SKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREVLLDPQELYPK 249 SKKI+SRA L+ W DNP+EL EILDWFQ+ FE+LW QM EV L + L K Sbjct: 1265 SKKINSRATLRAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKK 1322 >ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX37-like [Cucumis sativus] Length = 1333 Score = 1221 bits (3159), Expect = 0.0 Identities = 711/1318 (53%), Positives = 883/1318 (66%), Gaps = 22/1318 (1%) Frame = -2 Query: 4136 LKKKPALSNSEKRXXXXXXXXXXXXXXQSESIKTLQKYQIREDAYSLLKSSGNIGQVETK 3957 L KKP LS S+KR S+S++TL+KY+I +DA+ LL+SS NIG+ ET+ Sbjct: 50 LNKKPKLSKSQKRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETR 109 Query: 3956 REKRERAAQFSKIGLDVPNDDQPSKKRRKDGDFCETES---DVDKGQWKL----EDRP-- 3804 EKR R QFSK+G++VP +DQ K D E+ D+ ED P Sbjct: 110 LEKRSRDIQFSKVGIEVPGNDQQLDKTSSDISQYESHCGSLDISPCHQLSANADEDGPFV 169 Query: 3803 --NNVLQLVLGEEDLDNACLSSDTNQMIICSNILDKNSESATSSAKE-----CFVINSKS 3645 V + + +DLDN + + + + S++ DK + ++ C + Sbjct: 170 AEKEVTRGLDSFKDLDNDTIVPNDGKSL--SSLPDKVENTGAVLLEDERDLSCTMCTVGG 227 Query: 3644 MQDDKKKPSLIHCN-YKRRESTEPKDVELVSAKADCNNSSIHVDNAVQRPVISPTVVHVS 3468 ++ + ++ N K +E PK VE+ C S++ + R + P VV VS Sbjct: 228 FKEPEIMELIVGLNGLKDKEDGIPK-VEI------CTTSNLLPE---MRLLSKPIVVPVS 277 Query: 3467 RPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQVPQFLYEAGFGSSKTS 3288 RP EVE+ RKDLP EAINE VIICGETGCGKTTQVPQFLYEAGFGSS++S Sbjct: 278 RPCEVEDKRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSSQSS 337 Query: 3287 VRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKIGDNCSIKFMTDGILL 3108 + G IGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+KIGD SIKFMTDGILL Sbjct: 338 HQRGAIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGDTSSIKFMTDGILL 397 Query: 3107 REVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRMYQEQHEKVLSGVYVSP 2928 REVQ DFLLKRYSV+ILDEAHERS+NTDILIGMLSRV+++RQ ++ +Q + LSG +SP Sbjct: 398 REVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQRQLTLSGGKISP 457 Query: 2927 ENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPVRLYHTKKTDPNPEEDY 2748 EN+I PLKLVLMSATLRVEDFVS +LF PP+IEV RQFPV ++ +K+TD DY Sbjct: 458 ENMIFPLKLVLMSATLRVEDFVSGGRLFHVSPPIIEVPTRQFPVTVHFSKRTD---IVDY 514 Query: 2747 LAQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEELSYLSSKRKTENEVTLT 2568 + QAYKKV+ IHK+LPPGGILVFVTGQREVE LC KLR+AS++L +S+R EN + Sbjct: 515 IGQAYKKVMAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIKKTSERHGENNNGIV 574 Query: 2567 SEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXXXXXXXXSPNSGKESDL 2388 E NSI Q LDM +I+EAFE+H+ F+ +Q D+F+ S NS +S+L Sbjct: 575 -EMNSI-QNLDMNEINEAFEDHE-FSIEQTDRFSSFDKDEFDINDDVSDASYNSESDSEL 631 Query: 2387 TINXXXXXXXXXXXXXXXXXXDSGFLENGGKHVDVLGEPSSLSALKAAFESLAGKHPPNA 2208 N E G DV+ + +S+S+LKAAF++L K+ + Sbjct: 632 EFNEDAMSD-----------------ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDL 674 Query: 2207 DSDVLDISDPPSTKGCSISPPFVAEEKPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKV 2028 D +D + + E G SV G LHVLPLYAMLPAAAQLRVF++V Sbjct: 675 DKRQVDHTTDEDLSSKQCVSARLKENVEFGFSV---GALHVLPLYAMLPAAAQLRVFEEV 731 Query: 2027 KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXX 1848 KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK YNS+NG+E Y+VQWISK Sbjct: 732 KEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRA 791 Query: 1847 XXXXXXGPGYCYRLYSKAAFSNIFLEFSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXX 1668 GPG+CYRLYS A FSN +FS AEI+KIPVDGVVLLMKSMGI KV N Sbjct: 792 GRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTP 851 Query: 1667 XXXXXXXXXERCLKSLEALDNFGRLSLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAK 1488 E CLK+LEALD+ GRL+ LGKAMAQYP+SPRHSRMLLTVIQI+ ++ Y + Sbjct: 852 PETSAVLEAESCLKALEALDSGGRLTALGKAMAQYPLSPRHSRMLLTVIQIMRNLKNYDR 911 Query: 1487 VNLVFGYXXXXXXALSLSNPFIMQSGGSGGDKNDLQQNENS-GTSGTQKRLDQXXXXXXX 1311 NLV Y ALS+SNPF+M GS ++++QN+ S G + T++++++ Sbjct: 912 ANLVLAYSVAAAAALSMSNPFVMMFEGS-QINDEVEQNDRSFGDTKTEEKVEK---SLKK 967 Query: 1310 XXXXXXXXARAKFCNPSSDALSIAYALQLFELAESPVEFCNENALFFKTMEEMSKLRKQL 1131 +R KF + SSDAL++AYALQ FE +E+PV FCN L KTM+EMSKLRKQL Sbjct: 968 KLKEAGKLSREKFSDHSSDALTVAYALQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQL 1027 Query: 1130 LRLVF-HQKST--HQEFLWTHGPLEDVEQAWRVSSDKHPLSMYEEELLGQAICAGWADRV 960 L+LVF H +S+ EF WT+G LEDVE WRV S+KHPLS+ E+E++GQAICAGW DRV Sbjct: 1028 LKLVFNHSRSSIAESEFSWTNGVLEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDRV 1087 Query: 959 ARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLVYSELLQTKRPYM 780 A+ R +S S + DRK A +YQACMVKE VF++RWSSV+RS+P+FLVY+ELL+TKRPYM Sbjct: 1088 AKRIREISKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLVYNELLRTKRPYM 1147 Query: 779 HGVTSVKADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWARPLFGPHLWELPLHTLP 603 HG+TSV+ DWLVKYA SLC F+ LTDPKPYYD D V W P FGPHLWELPLH +P Sbjct: 1148 HGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNVP 1207 Query: 602 IKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQRRVGNLLNKLGGR 423 IK D+ Q VA FACALL+G+VLPCL SV +FLAA P+SILR E+LG +RVGNLL+KL R Sbjct: 1208 IK-DNAQGVAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGXKRVGNLLSKL--R 1264 Query: 422 SKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREVLLDPQELYPK 249 SKKI+SRA L+ W DNP+EL EILDWFQ+ FE+LW QM EV L + L K Sbjct: 1265 SKKINSRATLRAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKK 1322 >ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] Length = 1331 Score = 1144 bits (2958), Expect = 0.0 Identities = 679/1340 (50%), Positives = 849/1340 (63%), Gaps = 26/1340 (1%) Frame = -2 Query: 4202 DSNAFVLPGXXXXXXXXXKQDNLKK--------KPALSNSEKRXXXXXXXXXXXXXXQSE 4047 DSNA +LP +Q+ KK K LS ++K+ + Sbjct: 12 DSNALILPTKKMKKRKEMEQERGKKRGKVQSNKKQKLSKTQKKKLKKSEDDKEKQLLLEK 71 Query: 4046 SIKTLQKYQIREDAYSLLKSSGNIGQVETKREKRERAAQFSKIGLDVPNDDQPSKKRRKD 3867 ++KTL + + E A+ LL+SS NI +VET +EKR +A K GLDVP+DD SKK+ Sbjct: 72 ALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLDVPHDDDLSKKQDIA 131 Query: 3866 GDFCETESDVDKGQWKLEDRPNNVLQLVLGEEDL--DNACLSSDTNQMIICSNILDKNSE 3693 E ++ Q K E N+V+Q E+++ T + + + ++ N E Sbjct: 132 CTSESEEEEIHTVQVK-EFEENDVIQPFRTEKEILYTTTVPLESTQEPVHRNEVI--NYE 188 Query: 3692 SATSSAKECFVINSKSMQDDKKKPSLIHCNYKRRESTEPKDVELVSAKADCNNSSIHVDN 3513 + + +++ D+ + S + +ST KD + + + N S Sbjct: 189 TVAEPVAD---VSTDKQPDEIRSSSPTSRSIDDIKSTNSKDRKNENPTTNFNELSNLPHV 245 Query: 3512 AVQRPVISPTVVHVSRPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQV 3333 + QRP+ +PTVVHV RP EV+E RKDLP EAIN S+VI+CGETGCGKTTQV Sbjct: 246 STQRPLTTPTVVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCGKTTQV 305 Query: 3332 PQFLYEAGFGSSKTSVRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKI 3153 PQFLYEAG+GSSK RSGIIGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+KI Sbjct: 306 PQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKI 365 Query: 3152 GDNCSIKFMTDGILLREVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRMY 2973 G+NCSIKFMTDGILLREVQ+D LL+RYSV+ILDEAHERSLNTDILIGMLSRVI+ RQ++Y Sbjct: 366 GENCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRTRQKIY 425 Query: 2972 QEQHEKVLSGVYVSPENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPVR 2793 EQ + VLSG +SP+ ++ PLKLVLMSATLRV+DF S R LF PPPVIEV RQFPV Sbjct: 426 DEQQKMVLSGESISPDKMVFPLKLVLMSATLRVQDFTSGR-LFHTPPPVIEVPTRQFPVT 484 Query: 2792 LYHTKKTDPNPEEDYLAQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEELS 2613 +Y KKT+ DY+ AYKK++ IHK+LP GGILVFVTGQREVE LC KLRKAS+E Sbjct: 485 MYFAKKTEIT---DYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDLCRKLRKASKEFI 541 Query: 2612 YLSSKRKTENEVTLTSEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXXX 2433 K EN+ + +E +S V+G+++ +I+EAFE + QQ D+F+ Sbjct: 542 MKKVKGSVENDSNVVNETSS-VEGININEINEAFEMPGSSSMQQTDRFSGYDEDDNNFDE 600 Query: 2432 XXXXXSPNSGKESDLTINXXXXXXXXXXXXXXXXXXDSGFLENGGKHVDVLGEPSSLSAL 2253 +S ES+L N EN VDVLG SL++L Sbjct: 601 NESDSY-DSETESELEFNDDDKNNHNGS-------------ENNNNIVDVLGNEGSLASL 646 Query: 2252 KAAFESLAGKHPPNADSDVLDISDPPSTKGCSISPPFVAEEK-PRGPSVPCAGGLHVLPL 2076 KAAFE+L+G+ L S+ + G S V EK R G L VLPL Sbjct: 647 KAAFENLSGQA-------TLSSSNVNTEDGLDQSK--VGREKIARENHDSSPGALFVLPL 697 Query: 2075 YAMLPAAAQLRVFDKVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYNSTNGME 1896 YAMLPAAAQLRVFD VKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK Y+S+NGME Sbjct: 698 YAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGME 757 Query: 1895 EYKVQWISKXXXXXXXXXXXXXGPGYCYRLYSKAAFSNIFLEFSTAEISKIPVDGVVLLM 1716 Y+V+WISK G+CYRLYS AAFSN F EFS AE+ K+PV GVVLL+ Sbjct: 758 TYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLL 817 Query: 1715 KSMGIDKVANXXXXXXXXXXXXXXXERCLKSLEALDNFGRLSLLGKAMAQYPMSPRHSRM 1536 KSM I KVAN E CL++LEALD+ L+LLGKAMA YP+SPRHSRM Sbjct: 818 KSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDELTLLGKAMALYPLSPRHSRM 877 Query: 1535 LLTVIQILAKVQGYAKVNLVFGYXXXXXXALSLSNPFIMQSGGSGGDKNDLQQNENSGTS 1356 +LTVI+ + + +L+ Y ALSL NPF+MQ G+ +K D + +E S Sbjct: 878 ILTVIK-NTRYKRICNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNK-DSETSEKSRMG 935 Query: 1355 GTQKRLDQXXXXXXXXXXXXXXXARAKFCNPSSDALSIAYALQLFELAESPVEFCNENAL 1176 + +D+ AR KF SSDAL+IAYALQ FE +++ V+FC +NAL Sbjct: 936 DNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNAL 995 Query: 1175 FFKTMEEMSKLRKQLLRLVFHQK---STHQEFLWTHGPLEDVEQAWRVSSDKHPLSMYEE 1005 FKTM+EMSKLR+QLLRLVF Q QE+ WTHG LEDVE AWRVSS +PL + EE Sbjct: 996 HFKTMDEMSKLRQQLLRLVFFQSDKGGLEQEYSWTHGTLEDVEHAWRVSSAHYPLPLVEE 1055 Query: 1004 ELLGQAICAGWADRVARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPE 825 L+ +AICAGWADRVA+ + S + DG + A RYQ+CMV E++F+HRWSSV+ PE Sbjct: 1056 RLICRAICAGWADRVAKRIPISSKTDDGVTISRAGRYQSCMVDESIFIHRWSSVSTVRPE 1115 Query: 824 FLVYSELLQTKRP-----------YMHGVTSVKADWLVKYAGSLCTFT-RLTDPKPYYDP 681 FLVY+ELL+TKRP YMHGVT+V WLV+ A S C F+ LTDP+P+YD Sbjct: 1116 FLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDA 1175 Query: 680 LTDQVLCWARPLFGPHLWELPLHTLPIKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAA 501 DQV CW P FG WELP H++PI + +H RV FA ALLEGQV PCL++V+++++A Sbjct: 1176 QADQVKCWVIPTFGRFCWELPKHSIPISNVEH-RVQVFAYALLEGQVCPCLKTVRKYMSA 1234 Query: 500 PPASILRAESLGQRRVGNLLNKLGGRSKKIDSRAMLKETWNDNPHELQSEILDWFQERLR 321 PP +ILR ES GQ+RVGNL++KL S+ IDS A L+ W NP EL SEILDWFQ+ R Sbjct: 1235 PPETILRRESFGQKRVGNLISKL--NSRLIDSSATLRIVWKQNPRELFSEILDWFQQGFR 1292 Query: 320 DRFEELWKQMHREVLLDPQE 261 FEELW QM EVL + QE Sbjct: 1293 KHFEELWLQMLGEVLQETQE 1312 >ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine max] Length = 1403 Score = 1140 bits (2949), Expect = 0.0 Identities = 676/1312 (51%), Positives = 840/1312 (64%), Gaps = 22/1312 (1%) Frame = -2 Query: 4130 KKPALSNSEKRXXXXXXXXXXXXXXQSESIKTLQKYQIREDAYSLLKSSGNIGQVETKRE 3951 KK LS +KR ++IKTL + + E AY LL SS NI + ET +E Sbjct: 132 KKQKLSKPQKRKMKKLEDDKEKQLLLEKAIKTLNENTLPEYAYPLLLSSCNINRDETMKE 191 Query: 3950 KRERAAQFSKIGLDVPNDDQPSKKRRKDGDFCETESDVDKGQWKLEDRPNNVLQLVLGEE 3771 KR RA K GL+V D SKK D E +V++ + ++ Q + EE Sbjct: 192 KRRRAVHLLKEGLEVSYDGL-SKKPETDEIHLEHADEVEENEIQI--------QPIRSEE 242 Query: 3770 DLDNACLSSDTNQMIICSNILDKNSESATSSAKECFVINSKSMQDDKKKPSLIHCNYKRR 3591 L+ +S +++Q + N ++ + A S D+ + S + C+ Sbjct: 243 VLNTTSVSLESSQEPVHGNEVENYKYVSEHPADI-----SIDKHLDEIRSSTMSCSTDEI 297 Query: 3590 ESTEPKDVELVSAKADCNNSSIHVDN----AVQRPVISPTVVHVSRPNEVEENRKDLPXX 3423 +ST+ KD + D N++S + N + R PTVVHV RP EVE+ RKDLP Sbjct: 298 KSTKSKD------RTDENHNSNELSNLSDYSAPRWSNVPTVVHVYRPTEVEDKRKDLPIV 351 Query: 3422 XXXXXXXEAINECSTVIICGETGCGKTTQVPQFLYEAGFGSSKTSVRSGIIGVTQPRRVA 3243 EAIN+ S+VIICGETGCGKTTQVPQFLYEAG+GSSK GIIGVTQPRRVA Sbjct: 352 MMEQEIMEAINDRSSVIICGETGCGKTTQVPQFLYEAGYGSSK-----GIIGVTQPRRVA 406 Query: 3242 VLATAKRVAFELGLRLGKEVGFQVRHDRKIGDNCSIKFMTDGILLREVQSDFLLKRYSVI 3063 VLATAKRVA+ELGLRLGKEVGFQVR+D+KIG++CSIKFMTDGILLREVQ+D LL+RYSV+ Sbjct: 407 VLATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLREVQNDILLRRYSVL 466 Query: 3062 ILDEAHERSLNTDILIGMLSRVIQVRQRMYQEQHEKVLSGVYVSPENIISPLKLVLMSAT 2883 ILDEAHERSLNTDILIGMLSRVI+ RQ +Y EQ + +LSG VSPE +I PLKLVLMSAT Sbjct: 467 ILDEAHERSLNTDILIGMLSRVIKTRQMIYYEQKKMILSGESVSPEKMIFPLKLVLMSAT 526 Query: 2882 LRVEDFVSQRKLFSEPPPVIEVSARQFPVRLYHTKKTDPNPEEDYLAQAYKKVITIHKRL 2703 LRV+DF S KLF PPVIEV RQFPV Y KKT+ + DY+ +AYKKV+ IHKRL Sbjct: 527 LRVQDFTSG-KLFHTTPPVIEVPTRQFPVTAYFAKKTE---KTDYIGEAYKKVLAIHKRL 582 Query: 2702 PPGGILVFVTGQREVEYLCSKLRKASEELSYLSSKRKTENEVTLTSEKNSIVQGLDMKDI 2523 PPGGILVFVTGQREVE LC KLRKAS E + E + T+ E NS V+G+++ +I Sbjct: 583 PPGGILVFVTGQREVEDLCRKLRKASREFIKKKVEGSVETDSTVVHETNS-VEGVNINEI 641 Query: 2522 SEAFENHDRFTHQQIDKFNXXXXXXXXXXXXXXXXSPNSGKESDLTINXXXXXXXXXXXX 2343 +EAFE H + QQ D+F+ S +S +S+L + Sbjct: 642 NEAFEVHGSSSIQQTDRFSGYDEDEDDVNWNESEFSYDSETDSELEFDEDDDNLELS--- 698 Query: 2342 XXXXXXDSGFLENGGKHVDVLGEPSSLSALKAAFESLAGK---HPPNADSDVLDISDPPS 2172 EN VDVLG+ SL++LKAAFE L+G+ N + ++I Sbjct: 699 -----------ENRSNIVDVLGQAGSLASLKAAFEKLSGQATLSSSNGEETSVNIEG--- 744 Query: 2171 TKGCSISPPFVAEEKPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEGERLVVVATN 1992 ++ V EK + G L VLPLYAMLPAAAQLRVF++V +GERLVVVATN Sbjct: 745 ----NLDQSKVFREKRAKENCSTPGALCVLPLYAMLPAAAQLRVFEEVGDGERLVVVATN 800 Query: 1991 VAETSLTIPGIKYVVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXGPGYCY 1812 VAETSLTIPGIKYVVDTGREKVK Y+ +NGME Y+VQWISK GPG+CY Sbjct: 801 VAETSLTIPGIKYVVDTGREKVKNYDPSNGMETYEVQWISKASAAQRAGRSGRTGPGHCY 860 Query: 1811 RLYSKAAFSNIFLEFSTAEISKIPVDGVVLLMKSMGIDKVANXXXXXXXXXXXXXXXERC 1632 RLYS AAFSN F E S AE+ K+PV GVVLL+KSM I KVAN E C Sbjct: 861 RLYSSAAFSNEFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKDSSLLEAENC 920 Query: 1631 LKSLEALDNFGRLSLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYXXXXX 1452 LK+LEALDN L+LLGKAMA YP+SPRHSRMLLTVI+ + + N++ Y Sbjct: 921 LKALEALDNKDELTLLGKAMAHYPLSPRHSRMLLTVIK-NTRHEHKCNPNMLLAYAVAAA 979 Query: 1451 XALSLSNPFIMQSGGSGGDKNDLQQNENSGTSGTQKRLDQXXXXXXXXXXXXXXXARAKF 1272 ALSLSNPF+MQ DL+ E S +K + + AR KF Sbjct: 980 AALSLSNPFVMQY--EDDSSRDLEMVEKSSLGDGEKGIGKKEKSRKKKLKETAKVAREKF 1037 Query: 1271 CNPSSDALSIAYALQLFELAESPVEFCNENALFFKTMEEMSKLRKQLLRLVFHQKST--- 1101 +SDAL+IAYALQ FE +E EFC++NAL FKTM+EMSKLR+QLL+LVF+Q Sbjct: 1038 RVVTSDALTIAYALQCFEHSEKSAEFCDDNALHFKTMDEMSKLRQQLLKLVFYQSDKGGF 1097 Query: 1100 HQEFLWTHGPLEDVEQAWRVSSDKHPLSMYEEELLGQAICAGWADRVARHDRVVSGSTDG 921 +E+ W HG LEDVE+AW+ SS+K+PLS+ EE L+ QAICAGWADRVA+ S ++DG Sbjct: 1098 EEEYSWIHGSLEDVERAWQASSEKYPLSLVEERLICQAICAGWADRVAKRITASSRASDG 1157 Query: 920 DRKANAVRYQACMVKETVFLHRWSSVARSSPEFLVYSELLQTKRP-----------YMHG 774 ++ ++A++YQ+ MV E+VFLHRWSS + PEFLVY+ELL+TKRP YMHG Sbjct: 1158 EKTSHALKYQSSMVDESVFLHRWSSASIVGPEFLVYNELLETKRPNKEGITSAKRAYMHG 1217 Query: 773 VTSVKADWLVKYAGSLCTFT-RLTDPKPYYDPLTDQVLCWARPLFGPHLWELPLHTLPIK 597 VTSV+ WLV+ A S C F+ LTDP+PYYD TDQV CW P FG WELP H+LPI Sbjct: 1218 VTSVEPAWLVENAKSSCIFSPPLTDPRPYYDARTDQVKCWVIPTFGRFCWELPKHSLPIS 1277 Query: 596 SDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQRRVGNLLNKLGGRSK 417 +D+HQ V FA ALLEGQV PCL+SV+++++APP SI++ E+ GQ+RVGNLL+KL +S+ Sbjct: 1278 NDEHQ-VQVFAYALLEGQVCPCLKSVRKYMSAPPESIMKREAFGQKRVGNLLSKL--KSR 1334 Query: 416 KIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREVLLDPQE 261 IDS AML+ W +NP EL SEILDWFQ+ FEELW QM EVL++ QE Sbjct: 1335 LIDSSAMLRMVWKENPRELFSEILDWFQQSFHKHFEELWLQMLNEVLMEKQE 1386