BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000061
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   296   1e-77
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   291   3e-76
ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [S...   285   2e-74
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   284   3e-74
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...   283   9e-74

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score =  296 bits (757), Expect = 1e-77
 Identities = 145/170 (85%), Positives = 159/170 (93%)
 Frame = -2

Query: 512 QLFRDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEE 333
           QLFRDGSPMVYSGAVDRIIGRPPP+TGDVV+VADGTEKPIGWGLYNSVSMFCVRLMQ EE
Sbjct: 113 QLFRDGSPMVYSGAVDRIIGRPPPRTGDVVVVADGTEKPIGWGLYNSVSMFCVRLMQQEE 172

Query: 332 DAARDPSSALSMEHLLQTRIDAAIELRRFLGLPSIHTNAYRLVNSEGDRLSGLIVDVFGD 153
           +A RDPS AL+ME LL+TRIDAAIELRR LGLPS +TNAYRLVNSEGDRLSGLIVDVFGD
Sbjct: 173 EATRDPSCALNMEKLLETRIDAAIELRRNLGLPSANTNAYRLVNSEGDRLSGLIVDVFGD 232

Query: 152 LAVIASSAAWVEKYKPVIASCISRIDGINHVKWRPSIDILKEEGLELSDL 3
           LAVIASSAAWVEKYKP + +CISRID INH+ WR S+++LKEEGL+L+DL
Sbjct: 233 LAVIASSAAWVEKYKPQVEACISRIDEINHINWRQSVEMLKEEGLDLTDL 282


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  291 bits (745), Expect = 3e-76
 Identities = 151/209 (72%), Positives = 172/209 (82%), Gaps = 1/209 (0%)
 Frame = -2

Query: 626 RLAKSLSHPSSPAASTSLQELANXXXXXXXXXXXXXXV-QLFRDGSPMVYSGAVDRIIGR 450
           RL KSLS  SSPAAST +QE+A+                QLF+DGSPMVYSGAVDRIIGR
Sbjct: 7   RLIKSLSISSSPAAST-IQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRIIGR 65

Query: 449 PPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEDAARDPSSALSMEHLLQTRID 270
           PPPKTGDVVLVADGTEKPIGWGLYNSVSMF VRLMQLEE+AARDPS  L++E +++TR+ 
Sbjct: 66  PPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETRVH 125

Query: 269 AAIELRRFLGLPSIHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSAAWVEKYKPVIASC 90
            A ELR+ LGLPS  TNAYRLVNSEGDRLSGLI+DVFGDLAV+ASSAAWVEKYK  I  C
Sbjct: 126 TARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIEDC 185

Query: 89  ISRIDGINHVKWRPSIDILKEEGLELSDL 3
           +  I+ INHVKWRPS+DILKEEG+++S+L
Sbjct: 186 VRGIEEINHVKWRPSVDILKEEGIDVSEL 214


>ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [Sorghum bicolor]
           gi|241931463|gb|EES04608.1| hypothetical protein
           SORBIDRAFT_04g004900 [Sorghum bicolor]
          Length = 460

 Score =  285 bits (729), Expect = 2e-74
 Identities = 145/215 (67%), Positives = 171/215 (79%), Gaps = 8/215 (3%)
 Frame = -2

Query: 626 RLAKSLSHPSSPAA--------STSLQELANXXXXXXXXXXXXXXVQLFRDGSPMVYSGA 471
           RLA+  S  +S AA        S++L+ELA                Q+FRDGSPMVYSGA
Sbjct: 22  RLARRASSAASAAATVASASSSSSALEELAAERRGLAKVILKKGKTQIFRDGSPMVYSGA 81

Query: 470 VDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEDAARDPSSALSMEH 291
           VDRIIGRPPPK+GDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEDA RDP+ AL+ME 
Sbjct: 82  VDRIIGRPPPKSGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEDAIRDPTCALNMER 141

Query: 290 LLQTRIDAAIELRRFLGLPSIHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSAAWVEKY 111
           LL+ RI +A++LRR LGLPS  TNAYRL+NSEGDRLSGLIVD+F D+AVIASSAAWVEKY
Sbjct: 142 LLEARISSAVDLRRSLGLPSADTNAYRLINSEGDRLSGLIVDIFADVAVIASSAAWVEKY 201

Query: 110 KPVIASCISRIDGINHVKWRPSIDILKEEGLELSD 6
           +  I   +S+++GI+H+KWRPS DILKEEGL++S+
Sbjct: 202 RQEIQFLVSKVNGISHIKWRPSADILKEEGLDISE 236


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  284 bits (727), Expect = 3e-74
 Identities = 137/162 (84%), Positives = 151/162 (93%)
 Frame = -2

Query: 488 MVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEDAARDPSS 309
           MVYSGAVDRIIGRPPPKTGD+VLVADGTEKPIGWGLYNSVSMFCVRLMQLEE+A RDPS 
Sbjct: 1   MVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEEATRDPSC 60

Query: 308 ALSMEHLLQTRIDAAIELRRFLGLPSIHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSA 129
           AL M+ LL+TR +AAIELRR LGLPS HTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSA
Sbjct: 61  ALDMKKLLETRTNAAIELRRRLGLPSSHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSA 120

Query: 128 AWVEKYKPVIASCISRIDGINHVKWRPSIDILKEEGLELSDL 3
           AWVE YKP + +CI+RIDGINH+ WRPS+DILKEEG+++SD+
Sbjct: 121 AWVENYKPEVEACINRIDGINHINWRPSVDILKEEGMDVSDM 162


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score =  283 bits (723), Expect = 9e-74
 Identities = 144/207 (69%), Positives = 170/207 (82%), Gaps = 3/207 (1%)
 Frame = -2

Query: 614 SLSHPSSPAAS--TSLQELA-NXXXXXXXXXXXXXXVQLFRDGSPMVYSGAVDRIIGRPP 444
           SLS  S PAA+  T+LQ++A +               QLF+DG+PMVYSGAVDRIIGRPP
Sbjct: 13  SLSVCSLPAAASTTTLQQIALHQPKGVAKVVLKKGKTQLFKDGNPMVYSGAVDRIIGRPP 72

Query: 443 PKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEDAARDPSSALSMEHLLQTRIDAA 264
           PKTGDVVLVADGTEKPIGWG+YNSVSMFCVRLMQLE++A  D S AL+ME L++TRIDAA
Sbjct: 73  PKTGDVVLVADGTEKPIGWGMYNSVSMFCVRLMQLEDEATSDSSCALNMEKLIETRIDAA 132

Query: 263 IELRRFLGLPSIHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSAAWVEKYKPVIASCIS 84
           +E+RR LGLPS+HTNAYRL+NSEGDRLSGLI+DVFG +AV+ASSAAWVEKYK  I +CI 
Sbjct: 133 VEMRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFGGVAVVASSAAWVEKYKSEIEACIK 192

Query: 83  RIDGINHVKWRPSIDILKEEGLELSDL 3
           +I+ INHV WRPS+DILKE+G+   DL
Sbjct: 193 KINYINHVNWRPSVDILKEDGVNEYDL 219