BLASTX nr result

ID: Coptis24_contig00000058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000058
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314066.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002314066.1| predicted protein [Populus trichocarpa] gi|222850474|gb|EEE88021.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
 Frame = +2

Query: 5   AEKSLQTSRSKLCLTRSAQFVCGRLNPKRGSLRLWELDHQNYSKKKNYNQREVS------ 166
           AE    +S+ KL  +R  + +  R N + GSLR   +D   + KK N+ +   S      
Sbjct: 63  AENGSNSSQLKLPTSRERKILFARTNQRNGSLRFSSVD--KFLKKLNHGKGSRSLDSFGG 120

Query: 167 ------KLYGSTNSDGIVGNED-MGNIWDREESYPKVLVPGLPDETTGNSGSPVS 310
                 K++   +S  +VG ED +G+I +  ES  KVL+PGLPDE+ G   +PVS
Sbjct: 121 LKNGNSKVFSGNSSSYVVGGEDDVGSITENGESPTKVLIPGLPDESNGEYSAPVS 175


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