BLASTX nr result

ID: Coptis24_contig00000053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000053
         (1717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274753.1| PREDICTED: uncharacterized protein LOC100262...   416   e-113
ref|XP_003551516.1| PREDICTED: uncharacterized protein LOC100796...   408   e-111
emb|CAN75215.1| hypothetical protein VITISV_003516 [Vitis vinifera]   395   e-107
ref|XP_002317334.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_002298851.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106

>ref|XP_002274753.1| PREDICTED: uncharacterized protein LOC100262283 [Vitis vinifera]
          Length = 437

 Score =  416 bits (1068), Expect = e-113
 Identities = 237/427 (55%), Positives = 283/427 (66%), Gaps = 23/427 (5%)
 Frame = +2

Query: 263  SVVSGASEEQKS----------MNGISNNRKES---VNSDGYIGKLEVYVDRARDIQNIC 403
            S VS   E+QKS            GI  +RKES    N D ++G LEVY+ +ARDI NIC
Sbjct: 14   SPVSIEPEKQKSDLFVRNPGCLSGGIEVHRKESGMVCNMDAFVGSLEVYIHQARDIHNIC 73

Query: 404  IYHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDDNVRLNVPTVDCSLKCEVWMLSRV 583
            IYHKQDVYAKLCLTSDPE +VSTKIINGGGQNPVF+DN+RL+V T + SLKCE+WMLSRV
Sbjct: 74   IYHKQDVYAKLCLTSDPENAVSTKIINGGGQNPVFNDNLRLSVRTTESSLKCEIWMLSRV 133

Query: 584  KNYLEDQLLGFALVPLSHLFVENGKLAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMA 763
            KNYLEDQLLGFALVPLS + + NGKL +EFSLS+ DLFHSP+GFV+LS+SY GA PEVMA
Sbjct: 134  KNYLEDQLLGFALVPLSEVLLNNGKLEKEFSLSSTDLFHSPAGFVRLSLSYNGASPEVMA 193

Query: 764  IPTPRASLNANAVMQDSEIMDSVPNDYEKIEFPDPNVVNENHLMVSQYYG---XXXXXXX 934
            IP    +L  N   QD+EI +S+P+DY+ IEFPDP ++NEN LMVS+Y+G          
Sbjct: 194  IPALPTALATNEASQDTEISESMPSDYDAIEFPDPKIMNENQLMVSEYFGIPCTNLDSRS 253

Query: 935  XXXXXXXXXHYNS-GAGVHVVESFSEGSLNSTEVTKCDXXXXXXXXXXXXXXXIPVGSQS 1111
                     H +S   GV VVESFSEG++ S ++ K D               +P  S S
Sbjct: 254  SEGTLDNDSHLSSEKLGVQVVESFSEGTIESVQLPKLDSPPSSVSTNGSPSASLPASSVS 313

Query: 1112 FYDIPGASKSSNEELVSPLKE-SAESPKDESDSSNGIPSKNSANSILGASVVPEKTVVQQ 1288
              D  G SKS NEE VSP KE +A++   ESDSS G P    A   +  ++ PE+ +VQQ
Sbjct: 314  -SDASGTSKSPNEEHVSPPKEKNADTGDGESDSSGGAPCNTFAKPAVTVNIEPEQKMVQQ 372

Query: 1289 EIVDMYMKSMQQFTESLAKMKLPMDIEXXXXXXXXXXXXXEQKLQTPK-----STGSRVF 1453
            +IVDMYMKSMQQFTESLAKMKLPMDIE             +QKLQ  K     +  SRVF
Sbjct: 373  DIVDMYMKSMQQFTESLAKMKLPMDIE--TEPTNSGNSSSDQKLQAAKNNNNNNNNSRVF 430

Query: 1454 YGSRAFF 1474
            YGSRAFF
Sbjct: 431  YGSRAFF 437


>ref|XP_003551516.1| PREDICTED: uncharacterized protein LOC100796499 isoform 1 [Glycine
            max] gi|356566598|ref|XP_003551517.1| PREDICTED:
            uncharacterized protein LOC100796499 isoform 2 [Glycine
            max] gi|356566600|ref|XP_003551518.1| PREDICTED:
            uncharacterized protein LOC100796499 isoform 3 [Glycine
            max] gi|356566602|ref|XP_003551519.1| PREDICTED:
            uncharacterized protein LOC100796499 isoform 4 [Glycine
            max]
          Length = 428

 Score =  408 bits (1048), Expect = e-111
 Identities = 230/420 (54%), Positives = 281/420 (66%), Gaps = 16/420 (3%)
 Frame = +2

Query: 263  SVVSGASEEQKS----------MNGISNNRKESV--NSDGYIGKLEVYVDRARDIQNICI 406
            S V G SE+ KS             I  N KE V  N + Y+G L+VY+ +ARDIQNICI
Sbjct: 13   SSVLGESEKHKSDVFPGNSSPFSKDIEVNGKEVVMSNVEEYLGVLDVYIHQARDIQNICI 72

Query: 407  YHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDDNVRLNVPTVDCSLKCEVWMLSRVK 586
            YHKQDVYAK+CLTS+PET+VSTK INGGG+NPVF++N+R++V TVD SLKCE+WMLSRVK
Sbjct: 73   YHKQDVYAKICLTSNPETTVSTKTINGGGRNPVFNENLRIDVRTVDASLKCEIWMLSRVK 132

Query: 587  NYLEDQLLGFALVPLSHLFVENGKLAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMAI 766
            NYLEDQLLGFALVPLS + V+NGKL +EFSLS+ DLFHSPSGFVQLS+SY GA P+VM I
Sbjct: 133  NYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGASPDVMTI 192

Query: 767  PTPRASLNANAVMQDSEIMDSVPNDYEKIEFPDPNVVNENHLMVSQYYGXXXXXXXXXXX 946
                  +  +A +QDSE  +S+  D +KIEFPDP +VNE+HLMVS+Y+G           
Sbjct: 193  SAMPNKVATDAAVQDSETSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDS 252

Query: 947  XXXXXHYN--SGAGVHVVESFSEGSLNSTEVTKCDXXXXXXXXXXXXXXXIPVGSQSFYD 1120
                   N  S AGV +VESFS  S+ S + TK D               +P  S+S   
Sbjct: 253  LATSDAENQSSEAGVRLVESFSACSVESVQPTKVDSPPSSVSTNGVSSPSVPANSES--S 310

Query: 1121 IPGASKSSNEELVSPLKE--SAESPKDESDSSNGIPSKNSANSILGASVVPEKTVVQQEI 1294
               ASKSS +E VS  KE  + ++   ESDSS+G+PS++    ++  ++ PE  VVQQ+I
Sbjct: 311  DAAASKSSIQEQVSGTKEDKNVDTKDSESDSSSGVPSESFPKPVVTVNIEPEPKVVQQDI 370

Query: 1295 VDMYMKSMQQFTESLAKMKLPMDIEXXXXXXXXXXXXXEQKLQTPKSTGSRVFYGSRAFF 1474
            VDMYMKSMQQFTESLAKMKLPMD+E             EQKLQ  KS  SRVFYGSRAFF
Sbjct: 371  VDMYMKSMQQFTESLAKMKLPMDLE--SEPTSSGNSTTEQKLQPSKSNNSRVFYGSRAFF 428


>emb|CAN75215.1| hypothetical protein VITISV_003516 [Vitis vinifera]
          Length = 776

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/375 (56%), Positives = 259/375 (69%), Gaps = 5/375 (1%)
 Frame = +2

Query: 335  NSDGYIGKLEVYVDRARDIQNICIYHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDD 514
            N D ++G LEVY+ +ARDI NICIYHKQDVYAKLCLTSDPE +VSTKIINGGGQNPVF+D
Sbjct: 4    NMDAFVGSLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENAVSTKIINGGGQNPVFND 63

Query: 515  NVRLNVPTVDCSLKCEVWMLSRVKNYLEDQLLGFALVPLSHLFVENGKLAQEFSLSTNDL 694
            N+RL+V T++ SLKCE+WMLSRVKNYLEDQLLGFALVPLS + + NGKL +EFSLS+ DL
Sbjct: 64   NLRLSVRTMESSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLNNGKLEKEFSLSSTDL 123

Query: 695  FHSPSGFVQLSISYYGAQPEVMAIPTPRASLNANAVMQDSEIMDSVPNDYEKIEFPDPNV 874
            FHSP+GFV+LS+SY GA PEVMAIP    +L  N   QD+EI +S+P+DY+ IEFPDP +
Sbjct: 124  FHSPAGFVRLSLSYNGASPEVMAIPALPTALATNEASQDTEISESMPSDYDAIEFPDPKI 183

Query: 875  VNENHLMVSQYYG---XXXXXXXXXXXXXXXXHYNS-GAGVHVVESFSEGSLNSTEVTKC 1042
            +NEN LMVS+Y+G                   H +S   GV VVESFSEG++ S ++ K 
Sbjct: 184  MNENQLMVSEYFGIPCTNLDSRSSEGTLDNDSHLSSEKLGVQVVESFSEGTIESVQLPKL 243

Query: 1043 DXXXXXXXXXXXXXXXIPVGSQSFYDIPGASKSSNEELVSPLKE-SAESPKDESDSSNGI 1219
            D               +P  S S  D  G SKS NEE VSP KE +A++   ESDSS G 
Sbjct: 244  DSPPSSVSTNGSPSASLPASSVS-SDASGTSKSPNEEHVSPPKEKNADTGDGESDSSGGA 302

Query: 1220 PSKNSANSILGASVVPEKTVVQQEIVDMYMKSMQQFTESLAKMKLPMDIEXXXXXXXXXX 1399
            P    A   +  ++ PE+ +VQQ+IVDMYMKSMQQFTESLAKMKLPMDIE          
Sbjct: 303  PCNTFAKPAVTVNIEPEQKMVQQDIVDMYMKSMQQFTESLAKMKLPMDIE--TEPTNSGN 360

Query: 1400 XXXEQKLQTPKSTGS 1444
               +QKLQ  K+  +
Sbjct: 361  SSSDQKLQAAKNNNN 375


>ref|XP_002317334.1| predicted protein [Populus trichocarpa] gi|222860399|gb|EEE97946.1|
            predicted protein [Populus trichocarpa]
          Length = 432

 Score =  394 bits (1011), Expect = e-107
 Identities = 215/399 (53%), Positives = 273/399 (68%), Gaps = 9/399 (2%)
 Frame = +2

Query: 305  GISNNRKESV--NSDGYIGKLEVYVDRARDIQNICIYHKQDVYAKLCLTSDPETSVSTKI 478
            GI  +R ++V  N + ++G +EVY+ +ARDIQNICIYHKQDVYAK CLTSDPE +VSTKI
Sbjct: 37   GIEIHRNDAVVGNLEDFVGVVEVYIHQARDIQNICIYHKQDVYAKFCLTSDPEHTVSTKI 96

Query: 479  INGGGQNPVFDDNVRLNVPTVDCSLKCEVWMLSRVKNYLEDQLLGFALVPLSHLFVENGK 658
            INGGG+NPVF+D++RLNV TVD SLKCEV+M+SRV+NYLEDQLLGFALVPLS + + NG 
Sbjct: 97   INGGGRNPVFNDSLRLNVKTVDSSLKCEVFMMSRVRNYLEDQLLGFALVPLSEVLINNGN 156

Query: 659  LAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMAIPTPRASLNANAVMQDSEIMDSVPN 838
            L +EFSLS+ DLF+SP+GFVQLS+SY GA PEVMAIP    +L AN  +QDSEI +S+P 
Sbjct: 157  LDKEFSLSSTDLFYSPAGFVQLSLSYSGASPEVMAIPAIPTALAANGTIQDSEIQESLPC 216

Query: 839  DYEKIEFPDPNVVNENHLMVSQYYG-----XXXXXXXXXXXXXXXXHYNSGAGVHVVESF 1003
            +++KIEFPDP VVNEN +MVS+Y+G                     + +S  GVHVVESF
Sbjct: 217  EFDKIEFPDPKVVNENQMMVSEYFGIPCSSLDSEASESLATSDTENYLSSENGVHVVESF 276

Query: 1004 SEGSLNSTEVTKCDXXXXXXXXXXXXXXXIPVGSQSFYDIPGASKSSNEELVSPLK--ES 1177
            S  + +S +V K                 +   S++  D P ASK+ N + VS  K  ES
Sbjct: 277  SAATSDSIQVPKLGSPPSSVSTNGVSSPSVDASSET-SDSPAASKTPNLDHVSDRKERES 335

Query: 1178 AESPKDESDSSNGIPSKNSANSILGASVVPEKTVVQQEIVDMYMKSMQQFTESLAKMKLP 1357
                  E+DSS G  ++  A  ++  ++ PE  +VQQ+IVDMYMKSMQQFTESLAKMKLP
Sbjct: 336  TNVRDGETDSSGGASNEKIAKPVITVNIEPETNMVQQDIVDMYMKSMQQFTESLAKMKLP 395

Query: 1358 MDIEXXXXXXXXXXXXXEQKLQTPKSTGSRVFYGSRAFF 1474
            +DIE             ++ +Q  K+TGSRVFYGSRAFF
Sbjct: 396  LDIE--SGPTSSGSSSSDKNVQASKNTGSRVFYGSRAFF 432


>ref|XP_002298851.1| predicted protein [Populus trichocarpa] gi|222846109|gb|EEE83656.1|
            predicted protein [Populus trichocarpa]
          Length = 432

 Score =  390 bits (1002), Expect = e-106
 Identities = 213/399 (53%), Positives = 268/399 (67%), Gaps = 9/399 (2%)
 Frame = +2

Query: 305  GISNNRKESV--NSDGYIGKLEVYVDRARDIQNICIYHKQDVYAKLCLTSDPETSVSTKI 478
            GI   R E+V  + + +IG +EVYV +ARDIQNICIYHKQDVYAK CLTSDPE + STKI
Sbjct: 37   GIEFPRHEAVAGHPEDFIGIVEVYVHQARDIQNICIYHKQDVYAKFCLTSDPEYTFSTKI 96

Query: 479  INGGGQNPVFDDNVRLNVPTVDCSLKCEVWMLSRVKNYLEDQLLGFALVPLSHLFVENGK 658
            INGGG+NPVF+D ++LNV T+D SLKCE++M+SRVKNYLEDQLLGFALVPLS + + NG 
Sbjct: 97   INGGGRNPVFNDRLQLNVKTIDSSLKCEIFMMSRVKNYLEDQLLGFALVPLSEVLINNGN 156

Query: 659  LAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMAIPTPRASLNANAVMQDSEIMDSVPN 838
            L +EFSLS+ DLFHSP+GFVQLS+SY GA PEVM IP    +L  N  +QDSEI +S+P 
Sbjct: 157  LEKEFSLSSTDLFHSPAGFVQLSLSYVGASPEVMEIPAMPTALATNGTIQDSEIQESLPC 216

Query: 839  DYEKIEFPDPNVVNENHLMVSQYYG-----XXXXXXXXXXXXXXXXHYNSGAGVHVVESF 1003
            + +KIEFPDP VVNEN +M+S+Y+G                     +  S  GVHV+ES 
Sbjct: 217  ELDKIEFPDPKVVNENQMMISEYFGISCSSLDSEASESLAISNAENNLGSEIGVHVMESI 276

Query: 1004 SEGSLNSTEVTKCDXXXXXXXXXXXXXXXIPVGSQSFYDIPGASKSSNEELVSPLK--ES 1177
            S  + + T+V K D                   S++  D P ASK+ N+E VS  K  ES
Sbjct: 277  SAATSDPTQVPKLDSPPSSVSTNGVSSPSAAASSET-SDSPAASKTPNQEHVSVHKERES 335

Query: 1178 AESPKDESDSSNGIPSKNSANSILGASVVPEKTVVQQEIVDMYMKSMQQFTESLAKMKLP 1357
            A +   E+D S G  ++ +A  ++  ++ PE  VVQQ+IVDMYMKSMQQFTESLAKMKLP
Sbjct: 336  ANAGDGETDCSGGASNEKNAKPVITVNIEPESKVVQQDIVDMYMKSMQQFTESLAKMKLP 395

Query: 1358 MDIEXXXXXXXXXXXXXEQKLQTPKSTGSRVFYGSRAFF 1474
            +DI+             +QK+Q  K+T SRVFYGSRAFF
Sbjct: 396  LDID--SGPTSSGSSSSDQKMQASKNTSSRVFYGSRAFF 432


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